RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GSTO1P78417 241 aa26.81■■□□□ 1.88
VPS16-201ENST00000380443 CERS3Q8IU89 383 aa26.81■■□□□ 1.88
VPS16-201ENST00000380443 CCDC24Q8N4L8 307 aa26.81■■□□□ 1.88
VPS16-201ENST00000380443 RBM17Q96I25 401 aaKnown RBP26.81■■□□□ 1.88
VPS16-201ENST00000380443 KINO60870 393 aaKnown RBP26.81■■□□□ 1.88
VPS16-201ENST00000380443 U2AF2P26368 475 aaKnown RBP eCLIP26.81■■□□□ 1.88
VPS16-201ENST00000380443 SEC23AQ15436 765 aa26.81■■□□□ 1.88
VPS16-201ENST00000380443 ANO1Q5XXA6 986 aa26.81■■□□□ 1.88
VPS16-201ENST00000380443 ENGASEQ8NFI3 743 aa26.81■■□□□ 1.88
VPS16-201ENST00000380443 TDRD7Q8NHU6 1098 aaKnown RBP26.81■■□□□ 1.88
VPS16-201ENST00000380443 SLC16A10Q8TF71 515 aa26.81■■□□□ 1.88
VPS16-201ENST00000380443 MRPS27Q92552 414 aaKnown RBP26.81■■□□□ 1.88
VPS16-201ENST00000380443 ARPP21Q9UBL0 812 aaPredicted RBP26.81■■□□□ 1.88
VPS16-201ENST00000380443 PCDHA7Q9UN72 937 aa26.81■■□□□ 1.88
VPS16-201ENST00000380443 MRVI1Q9Y6F6 885 aa26.81■■□□□ 1.88
VPS16-201ENST00000380443 SPTLC2O15270 562 aa26.8■■□□□ 1.88
VPS16-201ENST00000380443 CALM1P0DP23 149 aa26.8■■□□□ 1.88
VPS16-201ENST00000380443 CALM2P0DP24 149 aa26.8■■□□□ 1.88
VPS16-201ENST00000380443 CALM3P0DP25 149 aa26.8■■□□□ 1.88
VPS16-201ENST00000380443 CTR9Q6PD62 1173 aa26.8■■□□□ 1.88
VPS16-201ENST00000380443 IQCA1Q86XH1 822 aa26.8■■□□□ 1.88
VPS16-201ENST00000380443 ZNF654Q8IZM8 581 aa26.8■■□□□ 1.88
VPS16-201ENST00000380443 DUOX1Q9NRD9 1551 aa26.8■■□□□ 1.88
VPS16-201ENST00000380443 RANBP6O60518 1105 aaKnown RBP26.79■■□□□ 1.88
VPS16-201ENST00000380443 BBOX1O75936 387 aa26.79■■□□□ 1.88
VPS16-201ENST00000380443 SERPINB2P05120 415 aa26.79■■□□□ 1.88
VPS16-201ENST00000380443 POLR3DP05423 398 aaPredicted RBP26.79■■□□□ 1.88
VPS16-201ENST00000380443 RXRAP19793 462 aa26.79■■□□□ 1.88
VPS16-201ENST00000380443 ATP2B4P23634 1241 aa26.79■■□□□ 1.88
VPS16-201ENST00000380443 CHAF1AQ13111 956 aaPredicted RBP26.79■■□□□ 1.88
VPS16-201ENST00000380443 JMYQ8N9B5 988 aa26.79■■□□□ 1.88
VPS16-201ENST00000380443 FANCBQ8NB91 859 aa26.79■■□□□ 1.88
VPS16-201ENST00000380443 PHKBQ93100 1093 aa26.79■■□□□ 1.88
VPS16-201ENST00000380443 ZSCAN10Q96SZ4 725 aaPredicted RBP26.79■■□□□ 1.88
VPS16-201ENST00000380443 FTOQ9C0B1 505 aaKnown RBP eCLIP26.79■■□□□ 1.88
VPS16-201ENST00000380443 DEXIO95424 95 aa26.79■■□□□ 1.88
VPS16-201ENST00000380443 SNW1Q13573 536 aaKnown RBP26.79■■□□□ 1.88
VPS16-201ENST00000380443 GNL2Q13823 731 aaKnown RBP26.79■■□□□ 1.88
VPS16-201ENST00000380443 TMC4Q7Z404 712 aa26.79■■□□□ 1.88
VPS16-201ENST00000380443 COL23A1Q86Y22 540 aaPredicted RBP26.79■■□□□ 1.88
VPS16-201ENST00000380443 DZIP1Q86YF9 867 aaKnown RBP26.79■■□□□ 1.88
VPS16-201ENST00000380443 FSIP1Q8NA03 581 aa26.79■■□□□ 1.88
VPS16-201ENST00000380443 SLC26A6Q9BXS9 759 aa26.79■■□□□ 1.88
VPS16-201ENST00000380443 PDGFDQ9GZP0 370 aaPredicted RBP26.79■■□□□ 1.88
VPS16-201ENST00000380443 SAFBQ15424 915 aaKnown RBP eCLIP26.78■■□□□ 1.88
VPS16-201ENST00000380443 TNKSO95271 1327 aa26.78■■□□□ 1.88
VPS16-201ENST00000380443 KIF28PB7ZC32 967 aa26.77■■□□□ 1.88
VPS16-201ENST00000380443 LDHCP07864 332 aa26.77■■□□□ 1.88
VPS16-201ENST00000380443 HOXA10P31260 410 aaPredicted RBP26.77■■□□□ 1.88
VPS16-201ENST00000380443 SLC39A14Q15043 492 aa26.77■■□□□ 1.88
VPS16-201ENST00000380443 CCDC144CPQ8IYA2 1237 aa26.77■■□□□ 1.88
VPS16-201ENST00000380443 CKAP2LQ8IYA6 745 aa26.77■■□□□ 1.88
VPS16-201ENST00000380443 CRACR2BQ8N4Y2 399 aaPredicted RBP26.77■■□□□ 1.88
VPS16-201ENST00000380443 DCP1AQ9NPI6 582 aaPredicted RBP26.77■■□□□ 1.88
VPS16-201ENST00000380443 RBM28Q9NW13 759 aaKnown RBP26.77■■□□□ 1.88
VPS16-201ENST00000380443 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.77■■□□□ 1.88
VPS16-201ENST00000380443 CLIC4Q9Y696 253 aa26.77■■□□□ 1.88
VPS16-201ENST00000380443 PPP6R2O75170 966 aa26.76■■□□□ 1.88
VPS16-201ENST00000380443 LDHBP07195 334 aaKnown RBP26.76■■□□□ 1.88
VPS16-201ENST00000380443 MYL10Q9BUA6 226 aa26.76■■□□□ 1.88
VPS16-201ENST00000380443 MTFR1LQ9H019 292 aa26.76■■□□□ 1.88
VPS16-201ENST00000380443 USP25Q9UHP3 1055 aa26.76■■□□□ 1.88
VPS16-201ENST00000380443 USP17L12C9JPN9 530 aa26.76■■□□□ 1.87
VPS16-201ENST00000380443 USP17L21D6R901 530 aa26.76■■□□□ 1.87
VPS16-201ENST00000380443 ADCY5O95622 1261 aa26.76■■□□□ 1.87
VPS16-201ENST00000380443 PRDX5P30044 214 aa26.76■■□□□ 1.87
VPS16-201ENST00000380443 CATIPQ7Z7H3 387 aa26.76■■□□□ 1.87
VPS16-201ENST00000380443 TXNRD3Q86VQ6 643 aa26.76■■□□□ 1.87
VPS16-201ENST00000380443 ZKSCAN3Q9BRR0 538 aa26.76■■□□□ 1.87
VPS16-201ENST00000380443 RNF26Q9BY78 433 aaPredicted RBP26.76■■□□□ 1.87
VPS16-201ENST00000380443 GOLPH3LQ9H4A5 285 aa26.76■■□□□ 1.87
VPS16-201ENST00000380443 SPON1Q9HCB6 807 aa26.76■■□□□ 1.87
VPS16-201ENST00000380443 NBPF11Q86T75 865 aa26.75■■□□□ 1.87
VPS16-201ENST00000380443 CRAMP1Q96RY5 1269 aa26.75■■□□□ 1.87
VPS16-201ENST00000380443 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.75■■□□□ 1.87
VPS16-201ENST00000380443 AATFQ9NY61 560 aaKnown RBP eCLIP26.75■■□□□ 1.87
VPS16-201ENST00000380443 ZKSCAN5Q9Y2L8 839 aa26.75■■□□□ 1.87
VPS16-201ENST00000380443 KLRG2A4D1S0 409 aaPredicted RBP26.74■■□□□ 1.87
VPS16-201ENST00000380443 DDAH1O94760 285 aa26.74■■□□□ 1.87
VPS16-201ENST00000380443 ZBTB7AO95365 584 aa26.74■■□□□ 1.87
VPS16-201ENST00000380443 BAG3O95817 575 aa26.74■■□□□ 1.87
VPS16-201ENST00000380443 PTMAP06454 111 aaKnown RBP26.74■■□□□ 1.87
VPS16-201ENST00000380443 PPP4CP60510 307 aa26.74■■□□□ 1.87
VPS16-201ENST00000380443 PDE4BQ07343 736 aa26.74■■□□□ 1.87
VPS16-201ENST00000380443 FMR1NBQ8N0W7 255 aaPredicted RBP26.74■■□□□ 1.87
VPS16-201ENST00000380443 PODXL2Q9NZ53 605 aa26.74■■□□□ 1.87
VPS16-201ENST00000380443 CMA1P23946 247 aa26.74■■□□□ 1.87
VPS16-201ENST00000380443 ANO6Q4KMQ2 910 aa26.74■■□□□ 1.87
VPS16-201ENST00000380443 IFIT1BQ5T764 474 aaKnown RBP26.74■■□□□ 1.87
VPS16-201ENST00000380443 ENAHQ8N8S7 591 aaPredicted RBP26.74■■□□□ 1.87
VPS16-201ENST00000380443 AIFM3Q96NN9 605 aa26.74■■□□□ 1.87
VPS16-201ENST00000380443 FOXP1Q9H334 677 aaPredicted RBP26.74■■□□□ 1.87
VPS16-201ENST00000380443 GJB4Q9NTQ9 266 aa26.74■■□□□ 1.87
VPS16-201ENST00000380443 LAMB1P07942 1786 aa26.73■■□□□ 1.87
VPS16-201ENST00000380443 DLEC1Q9Y238 1755 aa26.73■■□□□ 1.87
VPS16-201ENST00000380443 ECM29Q5VYK3 1845 aa26.73■■□□□ 1.87
VPS16-201ENST00000380443 XBP1P17861 261 aa26.73■■□□□ 1.87
VPS16-201ENST00000380443 STX1AQ16623 288 aa26.73■■□□□ 1.87
VPS16-201ENST00000380443 NOL10Q9BSC4 688 aaKnown RBP26.73■■□□□ 1.87
VPS16-201ENST00000380443 MMP1P03956 469 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms