RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gm5157A0A087WRH8 301 aa11.92□□□□□ -0.5
Trim39-203ENSMUST00000113706 Ighv1-12A0A0A6YXJ9 117 aa11.92□□□□□ -0.5
Trim39-203ENSMUST00000113706 Obox1Q9D350 204 aa11.92□□□□□ -0.5
Trim39-203ENSMUST00000113706 Ighv2-6A0A075B6A7 116 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Trav3n-3A0A0G2JEM0 114 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Gm8439G3UWA7 96 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Defb26Q30KN7 186 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 MtorQ9JLN9 2549 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Chd6A3KFM7 2711 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Trav6-6A0A075B603 114 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Khdc1aQ3UWR2 166 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Gm5464Q3UY29 175 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Olfr311Q5NC59 308 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Slc35d2Q762D5 326 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Fmc1Q9CR13 113 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Spcs1Q9D958 161 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Nit2Q9JHW2 276 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Epg5Q80TA9 2572 aa11.91□□□□□ -0.5
Trim39-203ENSMUST00000113706 Srp14P16254 110 aaKnown RBP11.9□□□□□ -0.5
Trim39-203ENSMUST00000113706 Gm28038F7BCN9 126 aa11.9□□□□□ -0.5
Trim39-203ENSMUST00000113706 Gm5150Q1AN92 299 aa11.9□□□□□ -0.5
Trim39-203ENSMUST00000113706 Ighv1-50A0A075B5W1 117 aa11.9□□□□□ -0.51
Trim39-203ENSMUST00000113706 A930009A15RikG3UYI6 118 aa11.9□□□□□ -0.51
Trim39-203ENSMUST00000113706 Ins1P01325 108 aa11.9□□□□□ -0.51
Trim39-203ENSMUST00000113706 Gm94Q3V2D2 93 aa11.9□□□□□ -0.51
Trim39-203ENSMUST00000113706 Olfr317Q5NCD6 327 aa11.9□□□□□ -0.51
Trim39-203ENSMUST00000113706 Odf3Q920N1 254 aa11.9□□□□□ -0.51
Trim39-203ENSMUST00000113706 Tppp3Q9CRB6 176 aaKnown RBP11.9□□□□□ -0.51
Trim39-203ENSMUST00000113706 Cep192E9Q4Y4 2514 aaKnown RBP11.89□□□□□ -0.51
Trim39-203ENSMUST00000113706 Cox7a2lQ61387 111 aa11.89□□□□□ -0.51
Trim39-203ENSMUST00000113706 Dynlrb2Q9DAJ5 96 aa11.89□□□□□ -0.51
Trim39-203ENSMUST00000113706 Cend1Q9JKC6 149 aa11.89□□□□□ -0.51
Trim39-203ENSMUST00000113706 Usp9yF8VPU6 2556 aa11.89□□□□□ -0.51
Trim39-203ENSMUST00000113706 Scgb1b3J3QJY4 93 aa11.89□□□□□ -0.51
Trim39-203ENSMUST00000113706 Xirp2Q4U4S6 3784 aa11.89□□□□□ -0.51
Trim39-203ENSMUST00000113706 Olfr312Q7TRZ9 308 aa11.88□□□□□ -0.51
Trim39-203ENSMUST00000113706 Klk10Q99M20 278 aa11.88□□□□□ -0.51
Trim39-203ENSMUST00000113706 Tctex1d1Q9D5I4 173 aa11.88□□□□□ -0.51
Trim39-203ENSMUST00000113706 Ighv2-7A0A075B5Q8 116 aa11.88□□□□□ -0.51
Trim39-203ENSMUST00000113706 A0A1Y7VMQ4 148 aa11.88□□□□□ -0.51
Trim39-203ENSMUST00000113706 Ighv12-3A0A075B5T1 117 aa11.88□□□□□ -0.51
Trim39-203ENSMUST00000113706 Trbv17A0A140T8P8 114 aa11.88□□□□□ -0.51
Trim39-203ENSMUST00000113706 Plscr4P58196 326 aa11.88□□□□□ -0.51
Trim39-203ENSMUST00000113706 AY761185Q5ERI8 94 aa11.87□□□□□ -0.51
Trim39-203ENSMUST00000113706 Rbfox3Q8BIF2 374 aa11.87□□□□□ -0.51
Trim39-203ENSMUST00000113706 Ucn2Q99ML8 113 aa11.87□□□□□ -0.51
Trim39-203ENSMUST00000113706 Ube2tQ9CQ37 204 aa11.87□□□□□ -0.51
Trim39-203ENSMUST00000113706 Wfdc2Q9DAU7 174 aa11.87□□□□□ -0.51
Trim39-203ENSMUST00000113706 Chd9Q8BYH8 2885 aa11.87□□□□□ -0.51
Trim39-203ENSMUST00000113706 Scgb1b19F6WYW0 93 aa11.87□□□□□ -0.51
Trim39-203ENSMUST00000113706 PdfS4R2K0 231 aa11.87□□□□□ -0.51
Trim39-203ENSMUST00000113706 Ighv9-1A0A0B4J1P3 117 aa11.86□□□□□ -0.51
Trim39-203ENSMUST00000113706 Rnase1P00683 149 aa11.86□□□□□ -0.51
Trim39-203ENSMUST00000113706 Q24JP4 165 aa11.86□□□□□ -0.51
Trim39-203ENSMUST00000113706 Gm28305F6U473 122 aa11.86□□□□□ -0.51
Trim39-203ENSMUST00000113706 Tomm6Q9CQN3 74 aa11.86□□□□□ -0.51
Trim39-203ENSMUST00000113706 Gm11027G8JL69 66 aa11.86□□□□□ -0.51
Trim39-203ENSMUST00000113706 Erdr1J3QMM0 206 aa11.86□□□□□ -0.51
Trim39-203ENSMUST00000113706 TshbP12656 138 aa11.86□□□□□ -0.51
Trim39-203ENSMUST00000113706 Gm12888Q3UW77 119 aa11.86□□□□□ -0.51
Trim39-203ENSMUST00000113706 Gpr82Q8BZR0 328 aa11.86□□□□□ -0.51
Trim39-203ENSMUST00000113706 Rnf183Q8QZS5 190 aa11.86□□□□□ -0.51
Trim39-203ENSMUST00000113706 Map1lc3aQ91VR7 121 aa11.86□□□□□ -0.51
Trim39-203ENSMUST00000113706 Ighv2-3A0A075B696 115 aa11.85□□□□□ -0.51
Trim39-203ENSMUST00000113706 Tax1bp3Q9DBG9 124 aa11.85□□□□□ -0.51
Trim39-203ENSMUST00000113706 Gm26938S4R185 226 aa11.85□□□□□ -0.51
Trim39-203ENSMUST00000113706 Trav14-2A0A075B694 121 aa11.85□□□□□ -0.51
Trim39-203ENSMUST00000113706 Gm12845A0A0N4SUM5 588 aa11.85□□□□□ -0.51
Trim39-203ENSMUST00000113706 LhbO09108 141 aa11.85□□□□□ -0.51
Trim39-203ENSMUST00000113706 Cd69P37217 199 aa11.85□□□□□ -0.51
Trim39-203ENSMUST00000113706 Gpx7Q99LJ6 186 aa11.85□□□□□ -0.51
Trim39-203ENSMUST00000113706 Scgb1b11A0A087WQJ0 93 aa11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 Myo18bE9PV66 2605 aa11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 Trav9-2A0A075B647 113 aa11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 Trav6n-6A0A075B6B2 114 aa11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 Trav9-4A0A0B4J1K2 113 aa11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 4930447F04RikA2AFR2 126 aa11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 Dusp14Q9JLY7 198 aa11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 H2-DMb1P35737 261 aa11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 Snrpd3P62320 126 aaKnown RBP11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 Cacng7P62956 275 aa11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 Mapk1ip1lQ8BH93 242 aa11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 Mien1Q9CQ86 115 aa11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 Rabac1Q9Z0S9 185 aa11.84□□□□□ -0.51
Trim39-203ENSMUST00000113706 Rnf114Q9ET26 229 aa11.83□□□□□ -0.52
Trim39-203ENSMUST00000113706 Fhl2O70433 279 aa11.83□□□□□ -0.52
Trim39-203ENSMUST00000113706 Slc16a4Q8R0M8 500 aa11.83□□□□□ -0.52
Trim39-203ENSMUST00000113706 Malsu1Q9CWV0 228 aa11.83□□□□□ -0.52
Trim39-203ENSMUST00000113706 Cox8bP48772 70 aa11.82□□□□□ -0.52
Trim39-203ENSMUST00000113706 SstP60041 116 aa11.82□□□□□ -0.52
Trim39-203ENSMUST00000113706 Klk7Q91VE3 249 aa11.82□□□□□ -0.52
Trim39-203ENSMUST00000113706 Gng7Q61016 68 aa11.82□□□□□ -0.52
Trim39-203ENSMUST00000113706 Ighv1-75A0A075B5Y2 117 aa11.82□□□□□ -0.52
Trim39-203ENSMUST00000113706 Ighv8-4A0A0A6YW26 117 aa11.82□□□□□ -0.52
Trim39-203ENSMUST00000113706 Isg15Q64339 161 aaKnown RBP11.82□□□□□ -0.52
Trim39-203ENSMUST00000113706 Mcrip2Q9CQB2 160 aaKnown RBP11.82□□□□□ -0.52
Trim39-203ENSMUST00000113706 Q9DAA3 117 aa11.82□□□□□ -0.52
Trim39-203ENSMUST00000113706 Dkk2Q9QYZ8 259 aa11.82□□□□□ -0.52
Trim39-203ENSMUST00000113706 Zfp462B1AWL2 2495 aaKnown RBP11.81□□□□□ -0.52
Trim39-203ENSMUST00000113706 Trav16d-dv11A0A075B617 117 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms