RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Lect2O88803 151 aa11.62□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Kif26aQ52KG5 1881 aa11.62□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Dock9Q8BIK4 2055 aa11.62□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Igkv4-61A0A0G2JH00 117 aa11.62□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Ccl24Q9JKC0 119 aa11.62□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Fam241bQ9D882 120 aa11.62□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Igkv8-16A0A0G2JDG9 121 aa11.62□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Znrf2Q71FD5 238 aa11.62□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Prr14lE9Q7C4 1971 aa11.61□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 P01739 132 aa11.61□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Ighv1-52A0A0A6YXC3 117 aa11.61□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Gm20481G3UXK4 153 aa11.61□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 E130218I03RikA0A0U1RNU5 63 aa11.6□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Gm11733Q8BQP1 125 aa11.6□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Pfn2Q9JJV2 140 aa11.6□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Trav3-4A0A075B654 114 aa11.6□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Gatd1Q8BFQ8 220 aa11.6□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 4933414I15RikQ9D4D5 133 aa11.6□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Rspo3Q2TJ95 277 aa11.6□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Trav6-6A0A075B603 114 aa11.59□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 9930022D16RikQ8BG27 128 aa11.59□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Wfdc9Q3UW41 83 aa11.59□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Znf740Q6NZQ6 180 aa11.59□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Gm5941Q497P9 117 aa11.59□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Ighv1-77A0A0G2JGS9 117 aa11.59□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Mapk1ip1lQ8BH93 242 aa11.59□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Trbv14A0A140T8L9 115 aa11.58□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Plscr4P58196 326 aa11.58□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Ncor2Q9WU42 2472 aaKnown RBP11.58□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Gm9513B3GLJ6 99 aa11.58□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 E030018B13RikJ3QMS9 113 aa11.58□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Cd33Q63994 403 aa11.58□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Chchd5Q9CQP3 110 aa11.58□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 P04943 107 aa11.57□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Igkv4-54A0A0G2JES9 117 aa11.57□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 P01750 117 aa11.57□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Nup210lQ9D2F7 1881 aa11.57□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Gp9O88186 177 aa11.57□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Gm6040Q4QY32 63 aa11.57□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Eml5Q8BQM8 1977 aa11.56□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Trav12d-3A0A075B6A4 115 aa11.56□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Ighv8-8A0A0A6YXQ0 119 aa11.56□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 PkigO70139 76 aa11.56□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Ndufa3Q9CQ91 84 aa11.56□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Igkv4-72A0A0B4J1I4 117 aa11.56□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Ndufa1O35683 70 aa11.56□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Gm8251F6VUT6 1994 aa11.56□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Mrps12O35680 139 aa11.56□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 P01794 123 aa11.56□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Olfr311Q5NC59 308 aa11.56□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Fam110dQ80X91 271 aa11.56□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 P01791 123 aa11.55□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Igll1P20764 209 aa11.55□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Gata3P23772 443 aa11.55□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Gm9936Q8C864 160 aa11.55□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Cd24P24807 76 aa11.55□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Mrpl55Q9CZ83 127 aa11.55□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Defa27F2Z403 93 aa11.54□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Gm21994F6T2D2 329 aa11.54□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 UrahQ9CRB3 118 aa11.54□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Trav4d-3A0A075B625 110 aa11.54□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Cox7cP17665 63 aa11.54□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Pglyrp1O88593 182 aa11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Dmrtc1c1Q9D410 238 aa11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Ly6g5bQ8K1T4 194 aa11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Trav9d-4A0A0G2JG37 103 aa11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Ndufa12Q7TMF3 145 aaKnown RBP11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Nxph4G3X9N5 304 aa11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 P01837 106 aa11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Tmem131O70472 1877 aa11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Igkv4-79A0A075B5L8 119 aa11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Ighv3-1A0A075B5S6 116 aa11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Gm15091B1AZM2 449 aa11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 NpsP0C0P8 89 aa11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 BB014433Q8C5R5 389 aa11.53□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Gm10638F6QEG2 257 aa11.52□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Klhdc3Q8VEM9 382 aa11.52□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Q99M08 65 aa11.52□□□□□ -0.56
Pcdh20-201ENSMUST00000061628 Ighv1-12A0A0A6YXJ9 117 aa11.52□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 PemtQ61907 199 aa11.52□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Igkv2-137A0A0B4J1H6 120 aa11.52□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 P04944 107 aa11.52□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 1500011B03RikQ3TTH7 73 aa11.52□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Tm2d1Q99MB3 208 aa11.52□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Col6a6Q8C6K9 2265 aa11.52□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Sptan1P16546 2472 aaKnown RBP11.51□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Ighv6-7A0A0A6YWU3 119 aa11.51□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Myo7bQ99MZ6 2113 aa11.51□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Adamts9E9PUN6 1931 aa11.51□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 BC048562Q80ZQ7 204 aa11.51□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Gm4861Q8C5A4 106 aa11.51□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Igkv4-69A0A0B4J1I6 116 aa11.5□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 P01756 117 aa11.5□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 P01757 117 aa11.5□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 4930415O20RikQ8CDT5 131 aa11.5□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Ighv1-62-2A0A0A6YXZ4 119 aa11.5□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 B230307C23RikQ8BLB2 64 aa11.5□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Pcnx1Q9QYC1 2344 aa11.5□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Igkv4-78A0A0A6YYE5 119 aa11.5□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Bub3Q9WVA3 326 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms