RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Ighv4-1A0A075B5R5 116 aa10.34□□□□□ -0.75
Vps35-201ENSMUST00000034131 Ccl6P27784 116 aa10.34□□□□□ -0.75
Vps35-201ENSMUST00000034131 SNORCQ9CXL7 121 aa10.34□□□□□ -0.75
Vps35-201ENSMUST00000034131 Csmd1Q923L3 3564 aa10.34□□□□□ -0.75
Vps35-201ENSMUST00000034131 Ighv5-6A0A075B5Q0 117 aa10.34□□□□□ -0.75
Vps35-201ENSMUST00000034131 4930596D02RikQ3V0H9 216 aa10.34□□□□□ -0.75
Vps35-201ENSMUST00000034131 Ubald2Q8BQH4 164 aa10.34□□□□□ -0.75
Vps35-201ENSMUST00000034131 P01812 117 aa10.34□□□□□ -0.75
Vps35-201ENSMUST00000034131 Dlx6P70397 175 aa10.34□□□□□ -0.75
Vps35-201ENSMUST00000034131 9230109A22RikQ8BHE6 111 aa10.34□□□□□ -0.75
Vps35-201ENSMUST00000034131 March3Q8BRX9 218 aa10.34□□□□□ -0.75
Vps35-201ENSMUST00000034131 Amn1B8JKV0 258 aa10.33□□□□□ -0.76
Vps35-201ENSMUST00000034131 Fam216bQ8CC14 138 aa10.33□□□□□ -0.76
Vps35-201ENSMUST00000034131 Atp5lQ9CPQ8 103 aa10.33□□□□□ -0.76
Vps35-201ENSMUST00000034131 Q9DAQ5 155 aa10.33□□□□□ -0.76
Vps35-201ENSMUST00000034131 ApomQ9Z1R3 190 aa10.33□□□□□ -0.76
Vps35-201ENSMUST00000034131 Sumo2P61957 95 aaKnown RBP10.33□□□□□ -0.76
Vps35-201ENSMUST00000034131 Ndufa4Q62425 82 aaKnown RBP10.33□□□□□ -0.76
Vps35-201ENSMUST00000034131 Prrc2aQ7TSC1 2158 aaKnown RBP10.33□□□□□ -0.76
Vps35-201ENSMUST00000034131 Ighv14-2A0A075B5R7 117 aa10.32□□□□□ -0.76
Vps35-201ENSMUST00000034131 Lgals4Q8K419 326 aa10.32□□□□□ -0.76
Vps35-201ENSMUST00000034131 Gm16223Q8CBM3 117 aa10.32□□□□□ -0.76
Vps35-201ENSMUST00000034131 Q9D8Q6 235 aa10.32□□□□□ -0.76
Vps35-201ENSMUST00000034131 Colca2F8VPY8 239 aa10.32□□□□□ -0.76
Vps35-201ENSMUST00000034131 P01783 136 aa10.32□□□□□ -0.76
Vps35-201ENSMUST00000034131 Cd52Q64389 74 aa10.32□□□□□ -0.76
Vps35-201ENSMUST00000034131 AY761184Q9D848 116 aa10.32□□□□□ -0.76
Vps35-201ENSMUST00000034131 Triap1Q9D8Z2 76 aa10.32□□□□□ -0.76
Vps35-201ENSMUST00000034131 Timm23Q9WTQ8 209 aa10.32□□□□□ -0.76
Vps35-201ENSMUST00000034131 Cacna1aP97445 2368 aa10.32□□□□□ -0.76
Vps35-201ENSMUST00000034131 Ighv1-55A0A075B5W6 117 aa10.31□□□□□ -0.76
Vps35-201ENSMUST00000034131 SrarpQ3ULG3 163 aa10.31□□□□□ -0.76
Vps35-201ENSMUST00000034131 Gm10251J3QPM5 127 aa10.31□□□□□ -0.76
Vps35-201ENSMUST00000034131 Trav4n-4A0A075B615 110 aa10.31□□□□□ -0.76
Vps35-201ENSMUST00000034131 Gm933J3QPC1 141 aa10.31□□□□□ -0.76
Vps35-201ENSMUST00000034131 P01748 117 aa10.31□□□□□ -0.76
Vps35-201ENSMUST00000034131 S100a4P07091 101 aa10.31□□□□□ -0.76
Vps35-201ENSMUST00000034131 Defb28Q3V2L0 89 aa10.31□□□□□ -0.76
Vps35-201ENSMUST00000034131 Gm10735Q3US96 136 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 Olfr313Q5NC55 308 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 Ifitm10Q8BR26 201 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 Gkn1Q9CR36 201 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 Col6a6Q8C6K9 2265 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 Ighv1-77A0A0G2JGS9 117 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 1700084M14RikB1AT01 78 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 Tmem30bQ8BHG3 353 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 Vps13cQ8BX70 3748 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 Igkv4-81A0A0G2JEY5 119 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 Foxi2Q3I5G5 311 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 Mrpl16Q99N93 251 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 Arpc1aQ9R0Q6 370 aa10.3□□□□□ -0.76
Vps35-201ENSMUST00000034131 Igkv2-137A0A0B4J1H6 120 aa10.29□□□□□ -0.76
Vps35-201ENSMUST00000034131 Ccl11P48298 97 aa10.29□□□□□ -0.76
Vps35-201ENSMUST00000034131 Q5BN45 167 aa10.29□□□□□ -0.76
Vps35-201ENSMUST00000034131 Dmrt3Q80WT2 476 aa10.29□□□□□ -0.76
Vps35-201ENSMUST00000034131 Gm26566Q8CAC1 153 aa10.29□□□□□ -0.76
Vps35-201ENSMUST00000034131 Trav7d-3Q5R1I1 112 aa10.29□□□□□ -0.76
Vps35-201ENSMUST00000034131 Obox8V9GWY9 217 aa10.29□□□□□ -0.76
Vps35-201ENSMUST00000034131 Gm12845A0A0N4SUM5 588 aa10.28□□□□□ -0.76
Vps35-201ENSMUST00000034131 Gm15217A2CG07 155 aa10.28□□□□□ -0.76
Vps35-201ENSMUST00000034131 P01739 132 aa10.28□□□□□ -0.76
Vps35-201ENSMUST00000034131 Ang4Q3TMQ6 144 aa10.28□□□□□ -0.76
Vps35-201ENSMUST00000034131 Gm904Q3V2L5 102 aa10.28□□□□□ -0.76
Vps35-201ENSMUST00000034131 Gm5941Q497P9 117 aa10.28□□□□□ -0.76
Vps35-201ENSMUST00000034131 Mllt11P97783 90 aa10.28□□□□□ -0.76
Vps35-201ENSMUST00000034131 Arl3Q9WUL7 182 aa10.28□□□□□ -0.76
Vps35-201ENSMUST00000034131 Trav21-dv12A0A075B6C4 109 aa10.28□□□□□ -0.76
Vps35-201ENSMUST00000034131 Trav7n-5A0A075B604 112 aa10.27□□□□□ -0.76
Vps35-201ENSMUST00000034131 Sdhaf1Q3U276 118 aa10.27□□□□□ -0.76
Vps35-201ENSMUST00000034131 Pygo1Q9D0P5 417 aa10.27□□□□□ -0.76
Vps35-201ENSMUST00000034131 Rpl36-ps4A0A140T8U4 117 aa10.27□□□□□ -0.77
Vps35-201ENSMUST00000034131 RhohQ9D3G9 191 aa10.27□□□□□ -0.77
Vps35-201ENSMUST00000034131 Sdk1Q3UH53 2193 aa10.27□□□□□ -0.77
Vps35-201ENSMUST00000034131 Arid1bE9Q4N7 2244 aa10.27□□□□□ -0.77
Vps35-201ENSMUST00000034131 Atp5eP56382 52 aa10.27□□□□□ -0.77
Vps35-201ENSMUST00000034131 Defb47Q30KN1 79 aa10.26□□□□□ -0.77
Vps35-201ENSMUST00000034131 Trav3-4A0A075B654 114 aa10.26□□□□□ -0.77
Vps35-201ENSMUST00000034131 Gm10036E9PYL9 178 aaKnown RBP10.26□□□□□ -0.77
Vps35-201ENSMUST00000034131 BC106179Q8C9L1 186 aa10.26□□□□□ -0.77
Vps35-201ENSMUST00000034131 Tmem14cQ9CQN6 114 aa10.26□□□□□ -0.77
Vps35-201ENSMUST00000034131 NgfP01139 241 aa10.26□□□□□ -0.77
Vps35-201ENSMUST00000034131 Mrpl36Q99N90 102 aa10.26□□□□□ -0.77
Vps35-201ENSMUST00000034131 Crip2Q9DCT8 208 aaKnown RBP10.26□□□□□ -0.77
Vps35-201ENSMUST00000034131 Gvin1Q80SU7 2427 aa10.25□□□□□ -0.77
Vps35-201ENSMUST00000034131 Defa2P28309 93 aa10.25□□□□□ -0.77
Vps35-201ENSMUST00000034131 C920008G01RikA0A0B4J1N1 112 aa10.25□□□□□ -0.77
Vps35-201ENSMUST00000034131 NpwA0A1L1STR8 176 aa10.25□□□□□ -0.77
Vps35-201ENSMUST00000034131 D930048N14RikA2AA67 225 aa10.25□□□□□ -0.77
Vps35-201ENSMUST00000034131 4930447F04RikA2AFR2 126 aa10.25□□□□□ -0.77
Vps35-201ENSMUST00000034131 Wdr38Q9D994 303 aa10.25□□□□□ -0.77
Vps35-201ENSMUST00000034131 Phlda3Q9WV95 125 aa10.25□□□□□ -0.77
Vps35-201ENSMUST00000034131 Gm35549A0A0N4SUS7 141 aa10.24□□□□□ -0.77
Vps35-201ENSMUST00000034131 Gm10135F6TEE5 83 aa10.24□□□□□ -0.77
Vps35-201ENSMUST00000034131 1700067P10RikG3X8U2 183 aa10.24□□□□□ -0.77
Vps35-201ENSMUST00000034131 Rpl32-psP17932 135 aa10.24□□□□□ -0.77
Vps35-201ENSMUST00000034131 Cxcl13O55038 109 aa10.24□□□□□ -0.77
Vps35-201ENSMUST00000034131 Gm5629P06327 117 aa10.24□□□□□ -0.77
Vps35-201ENSMUST00000034131 Defa1P11477 93 aa10.24□□□□□ -0.77
Vps35-201ENSMUST00000034131 Psmb8P28063 276 aa10.24□□□□□ -0.77
Vps35-201ENSMUST00000034131 Prok1Q14A28 105 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 56.9 ms