RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 Rnf183Q8QZS5 190 aa13.62□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Ube2cQ9D1C1 179 aa13.62□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Utp20Q5XG71 2788 aaKnown RBP13.61□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Igkv4-62A0A0G2JDW9 117 aa13.61□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Tmem238lA0A1B0GS74 79 aa13.61□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Olfr869E9PX82 323 aa13.61□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Cox8bP48772 70 aa13.61□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Fam222aQ6PGH4 453 aa13.61□□□□□ -0.23
Chmp6-201ENSMUST00000026434 4930564D02RikQ9D4S4 103 aa13.61□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Klf13Q9JJZ6 289 aa13.61□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Trav16d-dv11A0A075B617 117 aa13.6□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Trav3n-3A0A0G2JEM0 114 aa13.6□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Gm9376G3UW68 176 aa13.6□□□□□ -0.23
Chmp6-201ENSMUST00000026434 LhbO09108 141 aa13.6□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Ins1P01325 108 aa13.6□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Spink2Q8BMY7 86 aa13.6□□□□□ -0.23
Chmp6-201ENSMUST00000026434 5930422O12RikQ8C4Y4 123 aa13.6□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Q9D131 166 aa13.6□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Csmd2V9GX34 3611 aa13.6□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Trav14-2A0A075B694 121 aa13.59□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Gm5157A0A087WRH8 301 aa13.59□□□□□ -0.23
Chmp6-201ENSMUST00000026434 MsmbO08540 113 aa13.59□□□□□ -0.23
Chmp6-201ENSMUST00000026434 S100a4P07091 101 aa13.59□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Tmem136Q3TYE7 245 aa13.59□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Rbfox3Q8BIF2 374 aa13.59□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Olfr498Q8VEW2 330 aa13.59□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Ucn2Q99ML8 113 aa13.59□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Abca2P41234 2434 aa13.59□□□□□ -0.23
Chmp6-201ENSMUST00000026434 LystP97412 3788 aa13.59□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Trav6-6A0A075B603 114 aa13.58□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Ighv2-3A0A075B696 115 aa13.58□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Esp3J3QN49 87 aa13.58□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Fhl2O70433 279 aa13.58□□□□□ -0.23
Chmp6-201ENSMUST00000026434 PlnP61014 52 aa13.58□□□□□ -0.23
Chmp6-201ENSMUST00000026434 MycbQ6P8Z1 170 aa13.58□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Gphb5Q812B2 130 aa13.58□□□□□ -0.23
Chmp6-201ENSMUST00000026434 Arid1bE9Q4N7 2244 aa13.58□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Prrc2aQ7TSC1 2158 aaKnown RBP13.58□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Ighv2-7A0A075B5Q8 116 aa13.58□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Ighv1-66A0A075B5X5 117 aa13.58□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Trbv17A0A140T8P8 114 aa13.58□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Scgb1b19F6WYW0 93 aa13.58□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Gm28051J3QMA2 81 aa13.58□□□□□ -0.24
Chmp6-201ENSMUST00000026434 H2-DMb2Q31099 261 aa13.58□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Mrpl36Q99N90 102 aa13.58□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Gm12845A0A0N4SUM5 588 aa13.57□□□□□ -0.24
Chmp6-201ENSMUST00000026434 A730046J19RikA0A1B0GSN8 89 aa13.57□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Lgals6O54891 301 aa13.57□□□□□ -0.24
Chmp6-201ENSMUST00000026434 P06334 169 aa13.57□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Tomm6Q9CQN3 74 aa13.57□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Card19Q9D1I2 183 aa13.57□□□□□ -0.24
Chmp6-201ENSMUST00000026434 OtogO55225 2910 aa13.56□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Ighv3-8A0A075B5T0 131 aa13.56□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Timm8bP62077 83 aaKnown RBP13.56□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Gm5150Q1AN92 299 aa13.56□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Iah1Q9DB29 249 aa13.56□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Col7a1Q63870 2944 aa13.56□□□□□ -0.24
Chmp6-201ENSMUST00000026434 TrrapQ80YV3 2565 aaKnown RBP13.56□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Gm20499D3Z4G5 72 aa13.55□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Gm11027G8JL69 66 aa13.55□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Srp14P16254 110 aaKnown RBP13.55□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Gng4P50153 75 aa13.55□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Ndufa4Q62425 82 aaKnown RBP13.55□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Gkn1Q9CR36 201 aa13.55□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Tppp3Q9CRB6 176 aaKnown RBP13.55□□□□□ -0.24
Chmp6-201ENSMUST00000026434 OtorQ9JIE3 128 aa13.55□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Trbv16A0A0B4J1H3 115 aa13.54□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Trbv30A0A0B4J1P1 111 aa13.54□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Rnase1P00683 149 aa13.54□□□□□ -0.24
Chmp6-201ENSMUST00000026434 P01736 120 aa13.54□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Gm12888Q3UW77 119 aa13.54□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Gm17430F6RSK3 157 aa13.54□□□□□ -0.24
Chmp6-201ENSMUST00000026434 TshbP12656 138 aa13.54□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Cd24P24807 76 aa13.54□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Q24JP4 165 aa13.54□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Igll1P20764 209 aa13.53□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Rpl32P62911 135 aaKnown RBP13.53□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Hspb8Q9JK92 196 aa13.53□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Muc2Q80Z19 2680 aa13.52□□□□□ -0.24
Chmp6-201ENSMUST00000026434 Trbv14A0A140T8L9 115 aa13.52□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Thy1P01831 162 aa13.52□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Rnf152Q8BG47 203 aa13.52□□□□□ -0.25
Chmp6-201ENSMUST00000026434 P06328 117 aa13.51□□□□□ -0.25
Chmp6-201ENSMUST00000026434 P06330 118 aa13.51□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Cfc1P97766 202 aa13.51□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Gm7489Q3UT34 171 aa13.51□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Mien1Q9CQ86 115 aa13.51□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Ormdl2Q9CQZ0 153 aa13.51□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Snai3Q9QY31 287 aa13.51□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Usp9xP70398 2559 aaKnown RBP13.5□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Trav6n-6A0A075B6B2 114 aa13.5□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Umad1E0CX23 159 aa13.5□□□□□ -0.25
Chmp6-201ENSMUST00000026434 1500011B03RikQ3TTH7 73 aa13.5□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Josd1Q9DBJ6 202 aa13.5□□□□□ -0.25
Chmp6-201ENSMUST00000026434 1810032O08RikE9PZV8 113 aa13.49□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Ssbp1Q9CYR0 152 aaKnown RBP13.49□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Trav9-2A0A075B647 113 aa13.49□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Trav9-4A0A0B4J1K2 113 aa13.49□□□□□ -0.25
Chmp6-201ENSMUST00000026434 A0A1Y7VMQ4 148 aa13.49□□□□□ -0.25
Chmp6-201ENSMUST00000026434 Ccl17F6R5P4 103 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 1325.1 ms