RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 MsmbO08540 113 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Kif26aQ52KG5 1881 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 RlfA2A7F4 1918 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Cacna1aP97445 2368 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Gm20726G3UX18 150 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Cd24P24807 76 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Mrps21P58059 87 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 SvipQ3UZP4 77 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Tmem86bQ497J1 226 aa11.6□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Zc2hc1aQ8BJH1 324 aa11.59□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Mlst8Q9DCJ1 326 aa11.59□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 3110018I06RikQ9CXS0 120 aa11.59□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 4930447F04RikA2AFR2 126 aa11.59□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Greb1Q3UHK3 1954 aa11.59□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Inafm2A0A1L1STD6 152 aa11.59□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Defb30Q30KN4 75 aa11.59□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Rnf183Q8QZS5 190 aa11.59□□□□□ -0.55
Pcdha1-201ENSMUST00000070797 Bdp1Q571C7 2467 aa11.58□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Ighv1-31A0A0A6YWK5 117 aa11.58□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 P01756 117 aa11.58□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 P01757 117 aa11.58□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 P18532 116 aa11.58□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Morn5Q9DAI9 170 aa11.58□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Ccl3P10855 92 aa11.57□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Zfhx2Q2MHN3 2562 aa11.57□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 P01739 132 aa11.57□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Lynx1P0DP60 116 aa11.57□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Gm4763Q8CFJ5 196 aa11.57□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 F8Q06194 2319 aa11.57□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Ndufa1O35683 70 aa11.57□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Cfc1P97766 202 aa11.57□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Gm20499D3Z4G5 72 aa11.57□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 CrygcQ61597 174 aa11.57□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Malrd1A2AJX4 2123 aa11.57□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Igkv6-13A0A0G2JGY3 119 aa11.56□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Egr1P08046 533 aa11.56□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Ly6c1P0CW02 131 aa11.56□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Tpsg1Q9QUL7 311 aa11.56□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Ang5Q5GAN1 145 aa11.56□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 4930415O20RikQ8CDT5 131 aa11.56□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Pear1Q8VIK5 1034 aa11.56□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Igkv2-137A0A0B4J1H6 120 aa11.56□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Cox8cA6H666 72 aa11.56□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Edn1P22387 202 aa11.56□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Ndufa11Q9D8B4 141 aa11.56□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Ighv1-49A0A0A6YWX2 117 aa11.55□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 P01726 129 aa11.55□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 P01728 117 aa11.55□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 P04940 107 aa11.55□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 P04941 107 aa11.55□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 UrahQ9CRB3 118 aa11.55□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Rbm3O89086 153 aaKnown RBP11.55□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 3110082J24RikF6Z6Z2 108 aa11.55□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Trav4-3A0A0B4J1K1 110 aa11.54□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Shisal2aA2A9G7 189 aa11.54□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Defb47Q30KN1 79 aa11.54□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Minos1Q7TNS2 76 aa11.54□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Atp6v0e1Q9CQD8 81 aa11.54□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Tomm7Q9D173 55 aa11.54□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 4933414I15RikQ9D4D5 133 aa11.54□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Obsl1D3YYU8 1804 aaKnown RBP11.54□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Igkv4-62A0A0G2JDW9 117 aa11.54□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Cacna1iE9Q7P2 2199 aa11.54□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 P01802 115 aa11.54□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 P04942 107 aa11.53□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Fam216bQ8CC14 138 aa11.53□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 CrebbpP45481 2441 aa11.53□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Rp1l1Q8CGM2 1859 aa11.53□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Gm6040Q4QY32 63 aa11.53□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Nxph4G3X9N5 304 aa11.53□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Lypd8Q9D7S0 255 aa11.53□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 BC107364E9Q5A2 140 aa11.52□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Foxi2Q3I5G5 311 aa11.52□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Mrpl52Q9D0Y8 121 aa11.52□□□□□ -0.56
Pcdha1-201ENSMUST00000070797 Rp1P56716 2095 aa11.52□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 A0A286YE02 88 aa11.52□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Gm15097E9QA14 449 aa11.52□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Pou2af1Q64693 256 aa11.52□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Luzp4B1AV09 449 aa11.52□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Gm15127B1AVZ5 449 aa11.52□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Gm15107B1B0X0 449 aa11.52□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Cmc4Q61908 68 aa11.52□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Pgpep1lQ9CWB5 130 aa11.51□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Vsig4F6TUL9 280 aa11.51□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 P01658 132 aa11.51□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 P01725 110 aa11.51□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 P01812 117 aa11.51□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Fam24aQ8CF27 98 aa11.51□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Ang2Q64438 145 aa11.51□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Zmat4Q8BZ94 229 aa11.51□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Loxl1P97873 607 aa11.5□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 MplkipQ9D011 178 aa11.5□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Fstl3Q9EQC7 256 aa11.5□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Timm17aQ9Z0V8 171 aa11.5□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Gm21060J3KMU4 56 aa11.5□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Stpg1Q9D2F5 341 aa11.5□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Tmem131O70472 1877 aa11.5□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Colca2F8VPY8 239 aa11.5□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Rmi2Q3UPE3 149 aa11.5□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Cabin1G3X8Q1 2187 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms