RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 PmvkQ9D1G2 192 aa11.92□□□□□ -0.5
Usp38-201ENSMUST00000042724 Ighv1-49A0A0A6YWX2 117 aa11.92□□□□□ -0.5
Usp38-201ENSMUST00000042724 Gm20517G3UVU6 152 aa11.92□□□□□ -0.5
Usp38-201ENSMUST00000042724 Tac4Q99N14 128 aa11.92□□□□□ -0.5
Usp38-201ENSMUST00000042724 OtoglF7A4A7 2325 aa11.92□□□□□ -0.5
Usp38-201ENSMUST00000042724 Smim10l1A0A087WNQ7 89 aa11.92□□□□□ -0.5
Usp38-201ENSMUST00000042724 CtsgP28293 261 aa11.92□□□□□ -0.5
Usp38-201ENSMUST00000042724 BlcapP62951 87 aa11.92□□□□□ -0.5
Usp38-201ENSMUST00000042724 HilpdaQ9JLS0 64 aa11.92□□□□□ -0.5
Usp38-201ENSMUST00000042724 Ighv8-4A0A0A6YW26 117 aa11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 Gm45717A0A1B0GT68 152 aa11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 Gm15557A6PWY0 234 aa11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 Reg3gO09049 174 aa11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 P01786 117 aa11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 Hoxb4P10284 250 aa11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 Spata25Q9DA57 226 aa11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 Gnb1lQ9EQ15 326 aa11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 Q8R092 253 aa11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 V1ra8Q9EQ48 279 aa11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 Tns1E9Q0S6 1888 aaKnown RBP11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 Gm9913Q8BQQ2 135 aa11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 Cysrt1Q9D1E4 142 aa11.91□□□□□ -0.5
Usp38-201ENSMUST00000042724 Dido1Q8C9B9 2256 aaKnown RBP11.9□□□□□ -0.5
Usp38-201ENSMUST00000042724 Cox7a2lQ61387 111 aa11.9□□□□□ -0.5
Usp38-201ENSMUST00000042724 Snx22Q8C084 192 aa11.9□□□□□ -0.5
Usp38-201ENSMUST00000042724 Tex48Q9DA81 110 aa11.9□□□□□ -0.5
Usp38-201ENSMUST00000042724 Gm9949Q8C9F4 104 aa11.9□□□□□ -0.5
Usp38-201ENSMUST00000042724 Tet1Q3URK3 2007 aaKnown RBP11.9□□□□□ -0.5
Usp38-201ENSMUST00000042724 Gm933J3QPC1 141 aa11.9□□□□□ -0.5
Usp38-201ENSMUST00000042724 Ighv1-23A0A0A6YVW3 117 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 Ighv1-52A0A0A6YXC3 117 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 1500009C09RikD3YYW9 81 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 ColqO35348 457 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 Atp6v0bQ91V37 205 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 UrahQ9CRB3 118 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 Lrp4Q8VI56 1905 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 Trav14-3A0A075B607 120 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 4930447F04RikA2AFR2 126 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gm5150Q1AN92 299 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 Tomm7Q9D173 55 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 Sptbn4E9PX29 2561 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 P01793 123 aa11.89□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gm17455G3UW87 128 aa11.88□□□□□ -0.51
Usp38-201ENSMUST00000042724 Zfand3Q497H0 227 aa11.88□□□□□ -0.51
Usp38-201ENSMUST00000042724 Trav8-1A0A075B641 109 aa11.88□□□□□ -0.51
Usp38-201ENSMUST00000042724 Bak1O08734 209 aa11.88□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gm9958Q8C9U4 106 aa11.88□□□□□ -0.51
Usp38-201ENSMUST00000042724 Trav14n-2A0A0G2JDF5 121 aa11.88□□□□□ -0.51
Usp38-201ENSMUST00000042724 Tex54G3UW99 86 aa11.88□□□□□ -0.51
Usp38-201ENSMUST00000042724 SeboxP70368 190 aa11.88□□□□□ -0.51
Usp38-201ENSMUST00000042724 Fam24aQ8CF27 98 aa11.88□□□□□ -0.51
Usp38-201ENSMUST00000042724 Shisal2aA2A9G7 189 aa11.88□□□□□ -0.51
Usp38-201ENSMUST00000042724 Synj2bpQ9D6K5 145 aa11.88□□□□□ -0.51
Usp38-201ENSMUST00000042724 Ighv1-50A0A075B5W1 117 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gpx1P11352 201 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 Lmo4P61969 165 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 Mlst8Q9DCJ1 326 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 Trav14d-1A0A075B6B1 121 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 Ighv1-77A0A0G2JGS9 117 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gm5089A1L3C8 106 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 Tcl1b4P56844 120 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 Fam110dQ80X91 271 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gm28038F7BCN9 126 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 Leap2Q91V13 76 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 Col13a1Q9R1N9 751 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 Piezo2Q8CD54 2822 aa11.87□□□□□ -0.51
Usp38-201ENSMUST00000042724 P03985 172 aa11.86□□□□□ -0.51
Usp38-201ENSMUST00000042724 1700020N15RikL7MTX3 112 aa11.86□□□□□ -0.51
Usp38-201ENSMUST00000042724 P01739 132 aa11.86□□□□□ -0.51
Usp38-201ENSMUST00000042724 P06330 118 aa11.86□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gp9O88186 177 aa11.86□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gm10188Q3V432 135 aa11.86□□□□□ -0.51
Usp38-201ENSMUST00000042724 Card19Q9D1I2 183 aa11.86□□□□□ -0.51
Usp38-201ENSMUST00000042724 Ncoa6Q9JL19 2067 aa11.86□□□□□ -0.51
Usp38-201ENSMUST00000042724 Nhlrc1Q8BR37 401 aa11.86□□□□□ -0.51
Usp38-201ENSMUST00000042724 Bub3Q9WVA3 326 aa11.86□□□□□ -0.51
Usp38-201ENSMUST00000042724 Iglv1A0A075B663 117 aa11.85□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gm815Q3UWS2 115 aa11.85□□□□□ -0.51
Usp38-201ENSMUST00000042724 Ndufa4Q62425 82 aaKnown RBP11.85□□□□□ -0.51
Usp38-201ENSMUST00000042724 Rnf114Q9ET26 229 aa11.85□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gm10553J3QPF1 123 aa11.85□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gm5941Q497P9 117 aa11.85□□□□□ -0.51
Usp38-201ENSMUST00000042724 8030423J24RikQ9CX45 142 aa11.85□□□□□ -0.51
Usp38-201ENSMUST00000042724 Chd8Q09XV5 2582 aaKnown RBP11.85□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gm6040Q4QY32 63 aa11.85□□□□□ -0.51
Usp38-201ENSMUST00000042724 Vmn1r197Q8R265 298 aa11.85□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gm20481G3UXK4 153 aa11.85□□□□□ -0.51
Usp38-201ENSMUST00000042724 P01738 130 aa11.85□□□□□ -0.51
Usp38-201ENSMUST00000042724 P01750 117 aa11.84□□□□□ -0.51
Usp38-201ENSMUST00000042724 Trav7d-3Q5R1I1 112 aa11.84□□□□□ -0.51
Usp38-201ENSMUST00000042724 Dmrt3Q80WT2 476 aa11.84□□□□□ -0.51
Usp38-201ENSMUST00000042724 Plac1Q9JI83 173 aa11.84□□□□□ -0.51
Usp38-201ENSMUST00000042724 Tmem238A9JSM3 176 aa11.84□□□□□ -0.51
Usp38-201ENSMUST00000042724 Gm9925F6T2U3 160 aa11.84□□□□□ -0.51
Usp38-201ENSMUST00000042724 Defa-rs2P17534 91 aa11.84□□□□□ -0.51
Usp38-201ENSMUST00000042724 Adamts20P59511 1906 aa11.83□□□□□ -0.52
Usp38-201ENSMUST00000042724 Hbb-bsA8DUK4 147 aa11.83□□□□□ -0.52
Usp38-201ENSMUST00000042724 Hbb-b1P02088 147 aa11.83□□□□□ -0.52
Usp38-201ENSMUST00000042724 E130116L18RikQ8BMV6 101 aa11.83□□□□□ -0.52
Usp38-201ENSMUST00000042724 Sdk1Q3UH53 2193 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms