RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Defa-rs2P17534 91 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Gm10767Q3TQP0 103 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Smim6Q3U0I6 56 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 H3BKT1 185 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Gm10604Q3V0X7 143 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Prss29Q99MS4 279 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 DscamQ9ERC8 2013 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 CrygbP04344 175 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Tmem219Q9D123 240 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Wdr31Q9JHB4 367 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Gm15294V9GXA7 121 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Trav14n-2A0A0G2JDF5 121 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Igkv5-37A0A140T8N4 115 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 P01680 129 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Gm10645Q3UPY1 145 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 OtorQ9JIE3 128 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Dmxl1Q6PNC0 3013 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Celsr1O35161 3034 aa8.49□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Ighv1-19A0A0A6YWX0 117 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 P01812 117 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Gm20726G3UX18 150 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Gm933J3QPC1 141 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 HampQ9EQ21 83 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Ammecr1Q9JHT5 344 aaKnown RBP8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Egr1P08046 533 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Cdkn1aP39689 159 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Defb47Q30KN1 79 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Fhl4Q8CDC8 279 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Q9CQ90 155 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Gm29644A0A087WPG2 191 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Loxl1P97873 607 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Q4KKZ1 196 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 C330021F23RikQ8C7T0 141 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Tomm6Q9CQN3 74 aa8.48□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Atp5iQ06185 71 aaKnown RBP8.47□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Gm4763Q8CFJ5 196 aa8.47□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Pip4p2Q9CZX7 257 aa8.47□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Igkv6-23A0A140T8N5 115 aa8.47□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Casp6O08738 276 aa8.47□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Defa25Q5G864 92 aa8.47□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Trav2Q5R1I9 109 aa8.47□□□□□ -1.05
Rnf40-201ENSMUST00000033088 1700008P02RikQ9DAJ8 175 aa8.47□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Ighv14-3A0A075B5R9 117 aa8.47□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Adrb3P25962 400 aa8.47□□□□□ -1.05
Rnf40-201ENSMUST00000033088 PlnP61014 52 aa8.47□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Dmxl2Q8BPN8 3032 aa8.46□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Trav14d-1A0A075B6B1 121 aa8.46□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Trav19A0A0B4J1K4 119 aa8.46□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Umad1E0CX23 159 aa8.46□□□□□ -1.05
Rnf40-201ENSMUST00000033088 TtrP07309 147 aa8.46□□□□□ -1.05
Rnf40-201ENSMUST00000033088 LtaP09225 202 aa8.46□□□□□ -1.05
Rnf40-201ENSMUST00000033088 P18532 116 aa8.46□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Srsf1Q6PDM2 248 aaKnown RBP8.46□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Rchy1Q9CR50 261 aa8.46□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Ighv9-3A0A0B4J1J5 117 aa8.46□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Nat8b-psE0CYC6 232 aa8.46□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Ly6lH3BJG9 140 aa8.46□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Sumo2P61957 95 aaKnown RBP8.46□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Pradc1Q9D9N8 188 aa8.46□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Spink1P09036 80 aa8.46□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Znf146Q8BQN6 292 aa8.46□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Arpc1aQ9R0Q6 370 aa8.46□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Zfp292Q9Z2U2 2698 aa8.46□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Ighv1-69A0A0G2JFS5 117 aa8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Igkv19-93A0A0G2JFZ3 115 aa8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 NgfP01139 241 aa8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Hoxd3P09027 433 aa8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Rps20P60867 119 aaKnown RBP8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 MdfiP70331 251 aa8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Rasl11bQ922H7 247 aa8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Q9CQM1 111 aa8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Olfr312Q7TRZ9 308 aa8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Myo15bI7HPW8 3033 aa8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Ighv1-62-3P01754 117 aa8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Samd5Q3V1H9 173 aa8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Ndufc2Q9CQ54 120 aa8.45□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Igkv4-81A0A0G2JEY5 119 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Igkv14-130A0A0G2JF45 117 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Ccl3P10855 92 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 IcosQ9WVS0 200 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Gm26602M0QWA4 95 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Ripply2Q2WG76 128 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Defa20Q45VN2 95 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Ang5Q5GAN1 145 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Cryba4Q9JJV0 196 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Trav4-4-dv10A0A075B651 110 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Trdv1A0A075B657 112 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Gm20379A0A087WR34 119 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Gm42674D3YUT9 64 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Q9D131 166 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Ankrd39Q9D2X0 183 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Gm26938S4R185 226 aa8.44□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Wdfy4E9Q2M9 3149 aa8.43□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Igkv4-80A0A075B5L7 116 aa8.43□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Gm19345G3UYD9 124 aa8.43□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Tcrg-C3L7N479 172 aa8.43□□□□□ -1.06
Rnf40-201ENSMUST00000033088 P03985 172 aa8.43□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Olfr553Q7TRS6 326 aa8.43□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Gm17324Q8C6J8 137 aa8.43□□□□□ -1.06
Rnf40-201ENSMUST00000033088 Ndufa2Q9CQ75 99 aa8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 603 ms