RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Gm45753A0A1C7CYU8 86 aa12.63□□□□□ -0.39
Trim28-201ENSMUST00000005705 Omt2bD3YX29 119 aa12.63□□□□□ -0.39
Trim28-201ENSMUST00000005705 Cox11Q6P8I6 275 aa12.63□□□□□ -0.39
Trim28-201ENSMUST00000005705 Rasl10aQ8K5A4 203 aa12.63□□□□□ -0.39
Trim28-201ENSMUST00000005705 Srd5a2Q99N99 254 aa12.63□□□□□ -0.39
Trim28-201ENSMUST00000005705 TbpP29037 316 aa12.62□□□□□ -0.39
Trim28-201ENSMUST00000005705 Tspo2Q9CRZ8 162 aa12.62□□□□□ -0.39
Trim28-201ENSMUST00000005705 Rabac1Q9Z0S9 185 aa12.62□□□□□ -0.39
Trim28-201ENSMUST00000005705 Celsr2Q9R0M0 2920 aa12.62□□□□□ -0.39
Trim28-201ENSMUST00000005705 Ighv1-37A0A0A6YW32 117 aa12.62□□□□□ -0.39
Trim28-201ENSMUST00000005705 Sub1P11031 127 aaKnown RBP12.62□□□□□ -0.39
Trim28-201ENSMUST00000005705 Nhlrc1Q8BR37 401 aa12.62□□□□□ -0.39
Trim28-201ENSMUST00000005705 Dusp14Q9JLY7 198 aa12.62□□□□□ -0.39
Trim28-201ENSMUST00000005705 Muc2Q80Z19 2680 aa12.61□□□□□ -0.39
Trim28-201ENSMUST00000005705 Trdv1A0A075B657 112 aa12.61□□□□□ -0.39
Trim28-201ENSMUST00000005705 Tmem8bB1AWJ5 472 aa12.61□□□□□ -0.39
Trim28-201ENSMUST00000005705 CklfQ9DAS1 152 aa12.61□□□□□ -0.39
Trim28-201ENSMUST00000005705 Defa37K9J724 93 aa12.61□□□□□ -0.39
Trim28-201ENSMUST00000005705 Defa5P28312 93 aa12.61□□□□□ -0.39
Trim28-201ENSMUST00000005705 Svs5P30933 122 aa12.61□□□□□ -0.39
Trim28-201ENSMUST00000005705 Cd69P37217 199 aa12.61□□□□□ -0.39
Trim28-201ENSMUST00000005705 Hif1anQ8BLR9 349 aa12.61□□□□□ -0.39
Trim28-201ENSMUST00000005705 QrfpQ8CE23 124 aa12.61□□□□□ -0.39
Trim28-201ENSMUST00000005705 UrahQ9CRB3 118 aa12.61□□□□□ -0.39
Trim28-201ENSMUST00000005705 AY761184Q9D848 116 aa12.6□□□□□ -0.39
Trim28-201ENSMUST00000005705 Ovol1Q9WTJ2 267 aa12.6□□□□□ -0.39
Trim28-201ENSMUST00000005705 P01794 123 aa12.6□□□□□ -0.39
Trim28-201ENSMUST00000005705 NrgnP60761 78 aa12.6□□□□□ -0.39
Trim28-201ENSMUST00000005705 OtosQ8R448 89 aa12.6□□□□□ -0.39
Trim28-201ENSMUST00000005705 Chchd5Q9CQP3 110 aa12.6□□□□□ -0.39
Trim28-201ENSMUST00000005705 Q9DAZ5 108 aa12.6□□□□□ -0.39
Trim28-201ENSMUST00000005705 H2al2bA9Z055 111 aa12.6□□□□□ -0.39
Trim28-201ENSMUST00000005705 Cysrt1Q9D1E4 142 aa12.6□□□□□ -0.39
Trim28-201ENSMUST00000005705 Arpc1aQ9R0Q6 370 aa12.6□□□□□ -0.39
Trim28-201ENSMUST00000005705 Csmd2V9GX34 3611 aa12.59□□□□□ -0.39
Trim28-201ENSMUST00000005705 Igkv4-90A0A075B5L3 117 aa12.59□□□□□ -0.39
Trim28-201ENSMUST00000005705 Olfr904Q7TRC9 310 aa12.59□□□□□ -0.39
Trim28-201ENSMUST00000005705 9130230L23RikQ8CC80 163 aa12.59□□□□□ -0.39
Trim28-201ENSMUST00000005705 Olfr1431Q8VF59 312 aa12.59□□□□□ -0.39
Trim28-201ENSMUST00000005705 Olfr975Q8VG91 310 aa12.59□□□□□ -0.39
Trim28-201ENSMUST00000005705 Gm2174F6ZVF2 133 aa12.59□□□□□ -0.39
Trim28-201ENSMUST00000005705 Pygo1Q9D0P5 417 aa12.59□□□□□ -0.39
Trim28-201ENSMUST00000005705 TcraP01849 138 aa12.58□□□□□ -0.39
Trim28-201ENSMUST00000005705 Trav7n-5A0A075B604 112 aa12.58□□□□□ -0.4
Trim28-201ENSMUST00000005705 Trav16d-dv11A0A075B617 117 aa12.58□□□□□ -0.4
Trim28-201ENSMUST00000005705 Gpx1P11352 201 aa12.58□□□□□ -0.4
Trim28-201ENSMUST00000005705 Anapc13Q8R034 74 aa12.58□□□□□ -0.4
Trim28-201ENSMUST00000005705 Gm26602M0QWA4 95 aa12.58□□□□□ -0.4
Trim28-201ENSMUST00000005705 Slamf6Q9ET39 351 aa12.58□□□□□ -0.4
Trim28-201ENSMUST00000005705 Rs1Q9Z1L4 224 aa12.58□□□□□ -0.4
Trim28-201ENSMUST00000005705 Igkv4-81A0A0G2JEY5 119 aa12.57□□□□□ -0.4
Trim28-201ENSMUST00000005705 P04944 107 aa12.57□□□□□ -0.4
Trim28-201ENSMUST00000005705 LoxP28301 411 aa12.57□□□□□ -0.4
Trim28-201ENSMUST00000005705 Rnf5O35445 180 aa12.57□□□□□ -0.4
Trim28-201ENSMUST00000005705 Hint1P70349 126 aaKnown RBP12.57□□□□□ -0.4
Trim28-201ENSMUST00000005705 Defa26Q3L180 93 aa12.57□□□□□ -0.4
Trim28-201ENSMUST00000005705 Ttc9cQ810A3 171 aa12.57□□□□□ -0.4
Trim28-201ENSMUST00000005705 Map1lc3aQ91VR7 121 aa12.57□□□□□ -0.4
Trim28-201ENSMUST00000005705 Mrps21P58059 87 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Vsig8Q6P3A4 417 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Setd2E9Q5F9 2537 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Hectd1Q69ZR2 2618 aaKnown RBP12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Gm12845A0A0N4SUM5 588 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Tmem136Q3TYE7 245 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Olfr322Q5NCC8 327 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Olfr317Q5NCD6 327 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Ang2Q64438 145 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Rab1bQ9D1G1 201 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 CtrlQ9ER05 264 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Cryba4Q9JJV0 196 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Trav8-1A0A075B641 109 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Defb33Q30KN3 62 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 SvipQ3UZP4 77 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Trav2Q5R1I9 109 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 HilpdaQ9JLS0 64 aa12.56□□□□□ -0.4
Trim28-201ENSMUST00000005705 Tstd1E9PY03 133 aa12.55□□□□□ -0.4
Trim28-201ENSMUST00000005705 Spata46Q4FZF2 204 aa12.55□□□□□ -0.4
Trim28-201ENSMUST00000005705 Prss41Q920S2 322 aa12.55□□□□□ -0.4
Trim28-201ENSMUST00000005705 Ankrd11E9Q4F7 2643 aa12.55□□□□□ -0.4
Trim28-201ENSMUST00000005705 P06330 118 aa12.55□□□□□ -0.4
Trim28-201ENSMUST00000005705 Khdc1aQ3UWR2 166 aa12.55□□□□□ -0.4
Trim28-201ENSMUST00000005705 Khdc1cQ4KL78 166 aa12.55□□□□□ -0.4
Trim28-201ENSMUST00000005705 Odf3l1Q810P2 275 aa12.55□□□□□ -0.4
Trim28-201ENSMUST00000005705 Hivep2Q3UHF7 2430 aa12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 Zfp493E9Q1L8 384 aa12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 Gm20517G3UVU6 152 aa12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 Fam216bQ8CC14 138 aa12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 TrrapQ80YV3 2565 aaKnown RBP12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 Ly6lH3BJG9 140 aa12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 TgfaP48030 159 aa12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 Gng4P50153 75 aa12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 Plekhb2Q9QZC7 221 aa12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 Nsun4C4P6S0 806 aaKnown RBP12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 Cks1brtQ3UNC9 96 aa12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 Il22ra1Q80XZ4 581 aa12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 Wfdc15bQ9JHY4 80 aa12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 Tcf24V9GWT9 166 aa12.54□□□□□ -0.4
Trim28-201ENSMUST00000005705 Ighv5-6A0A075B5Q0 117 aa12.53□□□□□ -0.4
Trim28-201ENSMUST00000005705 Ovol3D3YYM0 189 aa12.53□□□□□ -0.4
Trim28-201ENSMUST00000005705 P01756 117 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms