RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 SEC61GP60059 68 aa3.55□□□□□ -1.84
LINC00458-204ENST00000606055 C20orf197Q8N268 126 aa3.55□□□□□ -1.84
LINC00458-204ENST00000606055 KRTAP3-1Q9BYR8 98 aa3.55□□□□□ -1.84
LINC00458-204ENST00000606055 KRTAP10-6P60371 365 aaPredicted RBP3.54□□□□□ -1.84
LINC00458-204ENST00000606055 DMAC1Q96GE9 116 aa3.54□□□□□ -1.84
LINC00458-204ENST00000606055 LORP23490 312 aaPredicted RBP3.52□□□□□ -1.85
LINC00458-204ENST00000606055 ACYP2P14621 99 aa3.5□□□□□ -1.85
LINC00458-204ENST00000606055 SNURFQ9Y675 71 aa3.5□□□□□ -1.85
LINC00458-204ENST00000606055 H7BZZ5 65 aa3.49□□□□□ -1.85
LINC00458-204ENST00000606055 S4R3F8 94 aa3.49□□□□□ -1.85
LINC00458-204ENST00000606055 CSAG1Q6PB30 78 aa3.48□□□□□ -1.85
LINC00458-204ENST00000606055 ATP5EP56381 51 aaPredicted RBP3.47□□□□□ -1.85
LINC00458-204ENST00000606055 H0YAA0 97 aa3.45□□□□□ -1.86
LINC00458-204ENST00000606055 LCA10Q71F78 164 aa3.45□□□□□ -1.86
LINC00458-204ENST00000606055 SPTSSBQ8NFR3 76 aa3.45□□□□□ -1.86
LINC00458-204ENST00000606055 CCDC179H3BU77 68 aa3.44□□□□□ -1.86
LINC00458-204ENST00000606055 KRTAP3-3Q9BYR6 98 aa3.44□□□□□ -1.86
LINC00458-204ENST00000606055 SSPOA2VEC9 5147 aa3.44□□□□□ -1.86
LINC00458-204ENST00000606055 USH2AO75445 5202 aa3.43□□□□□ -1.86
LINC00458-204ENST00000606055 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
LINC00458-204ENST00000606055 TMEM258P61165 79 aa3.43□□□□□ -1.86
LINC00458-204ENST00000606055 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
LINC00458-204ENST00000606055 KRTAP9-8Q9BYQ0 159 aa3.42□□□□□ -1.86
LINC00458-204ENST00000606055 CYSTM1Q9H1C7 97 aa3.42□□□□□ -1.86
LINC00458-204ENST00000606055 MT2AP02795 61 aa3.4□□□□□ -1.87
LINC00458-204ENST00000606055 KRTAP10-10P60014 251 aa3.39□□□□□ -1.87
LINC00458-204ENST00000606055 CHKB-CPT1BH3BT56 60 aa3.38□□□□□ -1.87
LINC00458-204ENST00000606055 MT1FP04733 61 aa3.37□□□□□ -1.87
LINC00458-204ENST00000606055 COA5Q86WW8 74 aa3.37□□□□□ -1.87
LINC00458-204ENST00000606055 CRIPTQ9P021 101 aa3.37□□□□□ -1.87
LINC00458-204ENST00000606055 FCGBPQ9Y6R7 5405 aaPredicted RBP3.37□□□□□ -1.87
LINC00458-204ENST00000606055 V9GYY9 64 aa3.35□□□□□ -1.87
LINC00458-204ENST00000606055 KRTAP9-3Q9BYQ3 159 aa3.31□□□□□ -1.88
LINC00458-204ENST00000606055 SERP1Q9Y6X1 66 aa3.31□□□□□ -1.88
LINC00458-204ENST00000606055 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
LINC00458-204ENST00000606055 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
LINC00458-204ENST00000606055 NEBP20929 6669 aa3.29□□□□□ -1.88
LINC00458-204ENST00000606055 H3BS24 57 aa3.28□□□□□ -1.88
LINC00458-204ENST00000606055 RPS28P62857 69 aaKnown RBP3.28□□□□□ -1.88
LINC00458-204ENST00000606055 ADM2Q7Z4H4 148 aa3.28□□□□□ -1.88
LINC00458-204ENST00000606055 KRTAP3-2Q9BYR7 98 aa3.28□□□□□ -1.88
LINC00458-204ENST00000606055 LCE2BO14633 110 aa3.27□□□□□ -1.89
LINC00458-204ENST00000606055 M0QZ58 72 aa3.25□□□□□ -1.89
LINC00458-204ENST00000606055 KRTAP19-1Q8IUB9 90 aa3.24□□□□□ -1.89
LINC00458-204ENST00000606055 LINC01558Q9Y6Z2 57 aa3.24□□□□□ -1.89
LINC00458-204ENST00000606055 P0C880 135 aa3.23□□□□□ -1.89
LINC00458-204ENST00000606055 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
LINC00458-204ENST00000606055 Q5VV11 94 aa3.23□□□□□ -1.89
LINC00458-204ENST00000606055 PRR15LQ9BU68 103 aa3.22□□□□□ -1.89
LINC00458-204ENST00000606055 R4GN34 69 aa3.22□□□□□ -1.89
LINC00458-204ENST00000606055 A0A1B0GU69 56 aa3.21□□□□□ -1.9
LINC00458-204ENST00000606055 SMIM26A0A096LP01 95 aa3.2□□□□□ -1.9
LINC00458-204ENST00000606055 A6NN06 94 aa3.2□□□□□ -1.9
LINC00458-204ENST00000606055 Q1T7F1 81 aa3.2□□□□□ -1.9
LINC00458-204ENST00000606055 PRO0628Q9UI54 55 aa3.2□□□□□ -1.9
LINC00458-204ENST00000606055 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
LINC00458-204ENST00000606055 A0A1B0GU33 70 aa3.17□□□□□ -1.9
LINC00458-204ENST00000606055 KRTAP19-6Q3LI70 58 aa3.16□□□□□ -1.9
LINC00458-204ENST00000606055 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
LINC00458-204ENST00000606055 MT1BP07438 61 aa3.13□□□□□ -1.91
LINC00458-204ENST00000606055 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
LINC00458-204ENST00000606055 UQCR11O14957 56 aa3.11□□□□□ -1.91
LINC00458-204ENST00000606055 KRTAP13-4Q3LI77 160 aa3.1□□□□□ -1.91
LINC00458-204ENST00000606055 PLAC4Q8WY50 150 aa3.1□□□□□ -1.91
LINC00458-204ENST00000606055 PMAIP1Q13794 54 aa3.07□□□□□ -1.92
LINC00458-204ENST00000606055 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
LINC00458-204ENST00000606055 PRO2289Q9P1D8 64 aa3.06□□□□□ -1.92
LINC00458-204ENST00000606055 KRTAP10-5P60370 271 aa3.05□□□□□ -1.92
LINC00458-204ENST00000606055 LINC01554Q52M75 96 aa3.05□□□□□ -1.92
LINC00458-204ENST00000606055 SPATA8Q6RVD6 105 aa3.05□□□□□ -1.92
LINC00458-204ENST00000606055 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
LINC00458-204ENST00000606055 PSPHP1O15172 72 aa3.04□□□□□ -1.92
LINC00458-204ENST00000606055 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.92
LINC00458-204ENST00000606055 KRTAP12-1P59990 96 aa3.01□□□□□ -1.93
LINC00458-204ENST00000606055 KMT2DO14686 5537 aa3□□□□□ -1.93
LINC00458-204ENST00000606055 MT1XP80297 61 aa3□□□□□ -1.93
LINC00458-204ENST00000606055 A0A0D9SG42 100 aa2.99□□□□□ -1.93
LINC00458-204ENST00000606055 A6NED7 52 aa2.98□□□□□ -1.93
LINC00458-204ENST00000606055 A8MU10 97 aa2.97□□□□□ -1.93
LINC00458-204ENST00000606055 K7ERS5 55 aa2.97□□□□□ -1.93
LINC00458-204ENST00000606055 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
LINC00458-204ENST00000606055 CAMK2N1Q7Z7J9 78 aa2.97□□□□□ -1.93
LINC00458-204ENST00000606055 SPINT4Q6UDR6 99 aa2.96□□□□□ -1.94
LINC00458-204ENST00000606055 CDC42SE1Q9NRR8 79 aa2.96□□□□□ -1.94
LINC00458-204ENST00000606055 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
LINC00458-204ENST00000606055 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
LINC00458-204ENST00000606055 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
LINC00458-204ENST00000606055 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
LINC00458-204ENST00000606055 KTN1-AS1Q86SY8 53 aa2.86□□□□□ -1.95
LINC00458-204ENST00000606055 BRK1Q8WUW1 75 aa2.85□□□□□ -1.95
LINC00458-204ENST00000606055 TNP1P09430 55 aa2.84□□□□□ -1.95
LINC00458-204ENST00000606055 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.95
LINC00458-204ENST00000606055 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
LINC00458-204ENST00000606055 C10orf95Q9H7T3 257 aa2.84□□□□□ -1.95
LINC00458-204ENST00000606055 KRTAP10-7P60409 375 aaPredicted RBP2.83□□□□□ -1.96
LINC00458-204ENST00000606055 KRTAP25-1Q3LHN0 102 aa2.83□□□□□ -1.96
LINC00458-204ENST00000606055 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
LINC00458-204ENST00000606055 KRTAP23-1A1A580 65 aa2.82□□□□□ -1.96
LINC00458-204ENST00000606055 SPRR2FQ96RM1 72 aa2.81□□□□□ -1.96
LINC00458-204ENST00000606055 ROMO1P60602 79 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms