RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 KRTAP9-8Q9BYQ0 159 aa7.96□□□□□ -1.14
ATG4D-205ENST00000586477 NDUFC1O43677 76 aa7.95□□□□□ -1.14
ATG4D-205ENST00000586477 SPANXA2-OT1Q8N9U9 137 aa7.89□□□□□ -1.15
ATG4D-205ENST00000586477 KRTAP3-1Q9BYR8 98 aa7.89□□□□□ -1.15
ATG4D-205ENST00000586477 DMAC1Q96GE9 116 aa7.87□□□□□ -1.15
ATG4D-205ENST00000586477 S4R3F8 94 aa7.87□□□□□ -1.15
ATG4D-205ENST00000586477 USH2AO75445 5202 aa7.86□□□□□ -1.15
ATG4D-205ENST00000586477 MT2AP02795 61 aa7.83□□□□□ -1.16
ATG4D-205ENST00000586477 ACYP2P14621 99 aa7.82□□□□□ -1.16
ATG4D-205ENST00000586477 SSPOA2VEC9 5147 aa7.8□□□□□ -1.16
ATG4D-205ENST00000586477 CCDC179H3BU77 68 aa7.79□□□□□ -1.16
ATG4D-205ENST00000586477 H7BZZ5 65 aa7.78□□□□□ -1.16
ATG4D-205ENST00000586477 MT1FP04733 61 aa7.77□□□□□ -1.17
ATG4D-205ENST00000586477 CSAG1Q6PB30 78 aa7.77□□□□□ -1.17
ATG4D-205ENST00000586477 LCA10Q71F78 164 aa7.77□□□□□ -1.17
ATG4D-205ENST00000586477 CYSTM1Q9H1C7 97 aa7.71□□□□□ -1.18
ATG4D-205ENST00000586477 CHKB-CPT1BH3BT56 60 aa7.7□□□□□ -1.18
ATG4D-205ENST00000586477 ATP5EP56381 51 aaPredicted RBP7.7□□□□□ -1.18
ATG4D-205ENST00000586477 SPTSSBQ8NFR3 76 aa7.7□□□□□ -1.18
ATG4D-205ENST00000586477 KRTAP9-3Q9BYQ3 159 aa7.7□□□□□ -1.18
ATG4D-205ENST00000586477 LCE2BO14633 110 aa7.69□□□□□ -1.18
ATG4D-205ENST00000586477 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.67□□□□□ -1.18
ATG4D-205ENST00000586477 KRTAP10-10P60014 251 aa7.65□□□□□ -1.18
ATG4D-205ENST00000586477 TMEM258P61165 79 aa7.65□□□□□ -1.18
ATG4D-205ENST00000586477 KRTAP3-3Q9BYR6 98 aa7.65□□□□□ -1.18
ATG4D-205ENST00000586477 KRTAP9-7A8MTY7 169 aa7.64□□□□□ -1.19
ATG4D-205ENST00000586477 FCGBPQ9Y6R7 5405 aaPredicted RBP7.6□□□□□ -1.19
ATG4D-205ENST00000586477 COA5Q86WW8 74 aa7.59□□□□□ -1.19
ATG4D-205ENST00000586477 H0YAA0 97 aa7.56□□□□□ -1.2
ATG4D-205ENST00000586477 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
ATG4D-205ENST00000586477 RPS28P62857 69 aaKnown RBP7.53□□□□□ -1.2
ATG4D-205ENST00000586477 ADM2Q7Z4H4 148 aa7.43□□□□□ -1.22
ATG4D-205ENST00000586477 CRIPTQ9P021 101 aa7.42□□□□□ -1.22
ATG4D-205ENST00000586477 SEC61GP60059 68 aa7.39□□□□□ -1.23
ATG4D-205ENST00000586477 SERP1Q9Y6X1 66 aa7.39□□□□□ -1.23
ATG4D-205ENST00000586477 MACF1Q9UPN3 7388 aaKnown RBP7.39□□□□□ -1.23
ATG4D-205ENST00000586477 KRTAP19-6Q3LI70 58 aa7.38□□□□□ -1.23
ATG4D-205ENST00000586477 SYNE2Q8WXH0 6885 aaKnown RBP7.3□□□□□ -1.24
ATG4D-205ENST00000586477 KRTAP3-2Q9BYR7 98 aa7.28□□□□□ -1.24
ATG4D-205ENST00000586477 P0C880 135 aa7.27□□□□□ -1.25
ATG4D-205ENST00000586477 R4GN34 69 aa7.27□□□□□ -1.25
ATG4D-205ENST00000586477 A0A1B0GU69 56 aa7.25□□□□□ -1.25
ATG4D-205ENST00000586477 SPRR2GQ9BYE4 73 aa7.25□□□□□ -1.25
ATG4D-205ENST00000586477 PRR15LQ9BU68 103 aa7.24□□□□□ -1.25
ATG4D-205ENST00000586477 M0QZ58 72 aa7.2□□□□□ -1.26
ATG4D-205ENST00000586477 V9GYY9 64 aa7.2□□□□□ -1.26
ATG4D-205ENST00000586477 LINC01558Q9Y6Z2 57 aa7.19□□□□□ -1.26
ATG4D-205ENST00000586477 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.26
ATG4D-205ENST00000586477 MT1BP07438 61 aa7.15□□□□□ -1.26
ATG4D-205ENST00000586477 A0A1B0GU33 70 aa7.12□□□□□ -1.27
ATG4D-205ENST00000586477 KRTAP6-3Q3LI67 103 aa7.12□□□□□ -1.27
ATG4D-205ENST00000586477 Q5VV11 94 aa7.12□□□□□ -1.27
ATG4D-205ENST00000586477 KRTAP19-8Q3LI54 63 aa7.11□□□□□ -1.27
ATG4D-205ENST00000586477 Q1T7F1 81 aa7.08□□□□□ -1.28
ATG4D-205ENST00000586477 PRO0628Q9UI54 55 aa7.05□□□□□ -1.28
ATG4D-205ENST00000586477 LINC01554Q52M75 96 aa7.04□□□□□ -1.28
ATG4D-205ENST00000586477 A6NN06 94 aa7□□□□□ -1.29
ATG4D-205ENST00000586477 PLAC4Q8WY50 150 aa7□□□□□ -1.29
ATG4D-205ENST00000586477 UQCR11O14957 56 aa6.97□□□□□ -1.29
ATG4D-205ENST00000586477 KRTAP13-4Q3LI77 160 aa6.96□□□□□ -1.3
ATG4D-205ENST00000586477 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
ATG4D-205ENST00000586477 SPATA8Q6RVD6 105 aa6.94□□□□□ -1.3
ATG4D-205ENST00000586477 PSPHP1O15172 72 aa6.93□□□□□ -1.3
ATG4D-205ENST00000586477 A0A0D9SG42 100 aa6.87□□□□□ -1.31
ATG4D-205ENST00000586477 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
ATG4D-205ENST00000586477 NEBP20929 6669 aa6.84□□□□□ -1.31
ATG4D-205ENST00000586477 MUC12Q9UKN1 5478 aa6.83□□□□□ -1.32
ATG4D-205ENST00000586477 MIR22HGQ0VDD5 57 aa6.83□□□□□ -1.32
ATG4D-205ENST00000586477 A6NED7 52 aa6.79□□□□□ -1.32
ATG4D-205ENST00000586477 SPINT4Q6UDR6 99 aa6.78□□□□□ -1.32
ATG4D-205ENST00000586477 A8MU10 97 aa6.77□□□□□ -1.33
ATG4D-205ENST00000586477 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.33
ATG4D-205ENST00000586477 KRTAP12-1P59990 96 aa6.74□□□□□ -1.33
ATG4D-205ENST00000586477 BRK1Q8WUW1 75 aa6.73□□□□□ -1.33
ATG4D-205ENST00000586477 K7ERS5 55 aa6.71□□□□□ -1.34
ATG4D-205ENST00000586477 KRTAP5-9P26371 169 aa6.71□□□□□ -1.34
ATG4D-205ENST00000586477 KMT2DO14686 5537 aa6.7□□□□□ -1.34
ATG4D-205ENST00000586477 MT1XP80297 61 aa6.69□□□□□ -1.34
ATG4D-205ENST00000586477 KRTAP20-1Q3LI63 56 aa6.69□□□□□ -1.34
ATG4D-205ENST00000586477 KRTAP12-2P59991 146 aa6.68□□□□□ -1.34
ATG4D-205ENST00000586477 MDN1Q9NU22 5596 aa6.68□□□□□ -1.34
ATG4D-205ENST00000586477 CDC42SE1Q9NRR8 79 aa6.61□□□□□ -1.35
ATG4D-205ENST00000586477 PMAIP1Q13794 54 aa6.6□□□□□ -1.35
ATG4D-205ENST00000586477 SPRR2FQ96RM1 72 aa6.5□□□□□ -1.37
ATG4D-205ENST00000586477 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
ATG4D-205ENST00000586477 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
ATG4D-205ENST00000586477 SPRR2EP22531 72 aa6.45□□□□□ -1.38
ATG4D-205ENST00000586477 SPRR2BP35325 72 aa6.45□□□□□ -1.38
ATG4D-205ENST00000586477 SPRR2AP35326 72 aa6.45□□□□□ -1.38
ATG4D-205ENST00000586477 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
ATG4D-205ENST00000586477 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
ATG4D-205ENST00000586477 KTN1-AS1Q86SY8 53 aa6.41□□□□□ -1.38
ATG4D-205ENST00000586477 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
ATG4D-205ENST00000586477 TNP1P09430 55 aa6.38□□□□□ -1.39
ATG4D-205ENST00000586477 KRTAP10-7P60409 375 aaPredicted RBP6.38□□□□□ -1.39
ATG4D-205ENST00000586477 KRTAP10-12P60413 245 aa6.38□□□□□ -1.39
ATG4D-205ENST00000586477 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
ATG4D-205ENST00000586477 LCE1AQ5T7P2 110 aa6.32□□□□□ -1.4
ATG4D-205ENST00000586477 KRTAP25-1Q3LHN0 102 aa6.28□□□□□ -1.4
ATG4D-205ENST00000586477 KRTAP2-2Q9BYT5 123 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 204.1 ms