RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 COX6B2Q6YFQ2 88 aa5.07□□□□□ -1.6
SF3B3-207ENST00000566095 COA5Q86WW8 74 aa5.06□□□□□ -1.6
SF3B3-207ENST00000566095 MUC17Q685J3 4493 aa5.05□□□□□ -1.6
SF3B3-207ENST00000566095 C4orf26Q17RF5 130 aa5.04□□□□□ -1.6
SF3B3-207ENST00000566095 SPTSSBQ8NFR3 76 aa5.04□□□□□ -1.6
SF3B3-207ENST00000566095 Q1T7F1 81 aa5.03□□□□□ -1.6
SF3B3-207ENST00000566095 MPLKIPQ8TAP9 179 aa5.03□□□□□ -1.6
SF3B3-207ENST00000566095 SVIPQ8NHG7 77 aa5□□□□□ -1.61
SF3B3-207ENST00000566095 RNF213Q63HN8 5207 aa5□□□□□ -1.61
SF3B3-207ENST00000566095 CHKB-CPT1BH3BT56 60 aa4.99□□□□□ -1.61
SF3B3-207ENST00000566095 H1FX-AS1Q4G0G2 97 aa4.99□□□□□ -1.61
SF3B3-207ENST00000566095 KRTAP4-1Q9BYQ7 146 aa4.97□□□□□ -1.61
SF3B3-207ENST00000566095 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.62
SF3B3-207ENST00000566095 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
SF3B3-207ENST00000566095 S4R3F8 94 aa4.93□□□□□ -1.62
SF3B3-207ENST00000566095 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
SF3B3-207ENST00000566095 LCE2CQ5TA81 110 aa4.91□□□□□ -1.62
SF3B3-207ENST00000566095 PRR15LQ9BU68 103 aa4.89□□□□□ -1.63
SF3B3-207ENST00000566095 CSAG1Q6PB30 78 aa4.86□□□□□ -1.63
SF3B3-207ENST00000566095 SEC61GP60059 68 aa4.84□□□□□ -1.63
SF3B3-207ENST00000566095 M0R2T5 61 aa4.83□□□□□ -1.64
SF3B3-207ENST00000566095 LCA10Q71F78 164 aa4.83□□□□□ -1.64
SF3B3-207ENST00000566095 A0A1B0GU69 56 aa4.82□□□□□ -1.64
SF3B3-207ENST00000566095 H0YAA0 97 aa4.82□□□□□ -1.64
SF3B3-207ENST00000566095 KRTAP19-2Q3LHN2 52 aa4.81□□□□□ -1.64
SF3B3-207ENST00000566095 Q5VV11 94 aa4.79□□□□□ -1.64
SF3B3-207ENST00000566095 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-207ENST00000566095 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
SF3B3-207ENST00000566095 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
SF3B3-207ENST00000566095 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
SF3B3-207ENST00000566095 PSPHP1O15172 72 aa4.75□□□□□ -1.65
SF3B3-207ENST00000566095 MT1HP80294 61 aa4.75□□□□□ -1.65
SF3B3-207ENST00000566095 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
SF3B3-207ENST00000566095 UQCR11O14957 56 aa4.74□□□□□ -1.65
SF3B3-207ENST00000566095 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
SF3B3-207ENST00000566095 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
SF3B3-207ENST00000566095 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
SF3B3-207ENST00000566095 A6NED7 52 aa4.68□□□□□ -1.66
SF3B3-207ENST00000566095 SPATA8Q6RVD6 105 aa4.68□□□□□ -1.66
SF3B3-207ENST00000566095 A0A1B0GU33 70 aa4.67□□□□□ -1.66
SF3B3-207ENST00000566095 M0QZ58 72 aa4.65□□□□□ -1.67
SF3B3-207ENST00000566095 KRTAP10-6P60371 365 aaPredicted RBP4.65□□□□□ -1.67
SF3B3-207ENST00000566095 ADM2Q7Z4H4 148 aa4.65□□□□□ -1.67
SF3B3-207ENST00000566095 PRO0628Q9UI54 55 aa4.65□□□□□ -1.67
SF3B3-207ENST00000566095 CRIPTQ9P021 101 aa4.63□□□□□ -1.67
SF3B3-207ENST00000566095 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
SF3B3-207ENST00000566095 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
SF3B3-207ENST00000566095 KRTAP10-10P60014 251 aa4.57□□□□□ -1.68
SF3B3-207ENST00000566095 R4GN34 69 aa4.56□□□□□ -1.68
SF3B3-207ENST00000566095 P0C880 135 aa4.54□□□□□ -1.68
SF3B3-207ENST00000566095 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
SF3B3-207ENST00000566095 MT2AP02795 61 aa4.53□□□□□ -1.68
SF3B3-207ENST00000566095 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
SF3B3-207ENST00000566095 A6NN06 94 aa4.51□□□□□ -1.69
SF3B3-207ENST00000566095 K7ERS5 55 aa4.51□□□□□ -1.69
SF3B3-207ENST00000566095 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
SF3B3-207ENST00000566095 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
SF3B3-207ENST00000566095 MT1FP04733 61 aa4.48□□□□□ -1.69
SF3B3-207ENST00000566095 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
SF3B3-207ENST00000566095 KRTAP13-4Q3LI77 160 aa4.44□□□□□ -1.7
SF3B3-207ENST00000566095 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
SF3B3-207ENST00000566095 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
SF3B3-207ENST00000566095 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
SF3B3-207ENST00000566095 A8MU10 97 aa4.41□□□□□ -1.7
SF3B3-207ENST00000566095 LINC01554Q52M75 96 aa4.41□□□□□ -1.7
SF3B3-207ENST00000566095 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
SF3B3-207ENST00000566095 PLAC4Q8WY50 150 aa4.37□□□□□ -1.71
SF3B3-207ENST00000566095 A0A0D9SG42 100 aa4.36□□□□□ -1.71
SF3B3-207ENST00000566095 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
SF3B3-207ENST00000566095 KRTAP19-1Q8IUB9 90 aa4.35□□□□□ -1.71
SF3B3-207ENST00000566095 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
SF3B3-207ENST00000566095 SPINT4Q6UDR6 99 aa4.31□□□□□ -1.72
SF3B3-207ENST00000566095 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
SF3B3-207ENST00000566095 KRTAP12-2P59991 146 aa4.29□□□□□ -1.72
SF3B3-207ENST00000566095 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
SF3B3-207ENST00000566095 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
SF3B3-207ENST00000566095 ROMO1P60602 79 aa4.25□□□□□ -1.73
SF3B3-207ENST00000566095 PRO2289Q9P1D8 64 aa4.24□□□□□ -1.73
SF3B3-207ENST00000566095 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
SF3B3-207ENST00000566095 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
SF3B3-207ENST00000566095 MT1BP07438 61 aa4.21□□□□□ -1.74
SF3B3-207ENST00000566095 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
SF3B3-207ENST00000566095 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
SF3B3-207ENST00000566095 NEBP20929 6669 aa4.16□□□□□ -1.74
SF3B3-207ENST00000566095 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
SF3B3-207ENST00000566095 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
SF3B3-207ENST00000566095 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
SF3B3-207ENST00000566095 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
SF3B3-207ENST00000566095 KRTAP10-5P60370 271 aa4.09□□□□□ -1.75
SF3B3-207ENST00000566095 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
SF3B3-207ENST00000566095 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
SF3B3-207ENST00000566095 TNP1P09430 55 aa4.06□□□□□ -1.76
SF3B3-207ENST00000566095 USH2AO75445 5202 aa4.06□□□□□ -1.76
SF3B3-207ENST00000566095 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
SF3B3-207ENST00000566095 MT1XP80297 61 aa4.05□□□□□ -1.76
SF3B3-207ENST00000566095 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
SF3B3-207ENST00000566095 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
SF3B3-207ENST00000566095 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
SF3B3-207ENST00000566095 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
SF3B3-207ENST00000566095 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms