RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ACYP2P14621 99 aa6.25□□□□□ -1.41
TPM1-209ENST00000558072 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
TPM1-209ENST00000558072 FAT4Q6V0I7 4981 aa6.22□□□□□ -1.41
TPM1-209ENST00000558072 TMEM258P61165 79 aa6.22□□□□□ -1.41
TPM1-209ENST00000558072 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
TPM1-209ENST00000558072 CYSTM1Q9H1C7 97 aa6.17□□□□□ -1.42
TPM1-209ENST00000558072 SPTSSBQ8NFR3 76 aa6.16□□□□□ -1.42
TPM1-209ENST00000558072 S4R3F8 94 aa6.16□□□□□ -1.42
TPM1-209ENST00000558072 CHKB-CPT1BH3BT56 60 aa6.14□□□□□ -1.43
TPM1-209ENST00000558072 MT1HP80294 61 aa6.12□□□□□ -1.43
TPM1-209ENST00000558072 CSAG1Q6PB30 78 aa6.1□□□□□ -1.43
TPM1-209ENST00000558072 FLGP20930 4061 aaPredicted RBP6.09□□□□□ -1.43
TPM1-209ENST00000558072 M0R2T5 61 aa6.08□□□□□ -1.44
TPM1-209ENST00000558072 COA5Q86WW8 74 aa6.07□□□□□ -1.44
TPM1-209ENST00000558072 LCA10Q71F78 164 aa6.06□□□□□ -1.44
TPM1-209ENST00000558072 SERP1Q9Y6X1 66 aa6.02□□□□□ -1.45
TPM1-209ENST00000558072 H0YAA0 97 aa5.94□□□□□ -1.46
TPM1-209ENST00000558072 RPS28P62857 69 aaKnown RBP5.94□□□□□ -1.46
TPM1-209ENST00000558072 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
TPM1-209ENST00000558072 SEC61GP60059 68 aa5.92□□□□□ -1.46
TPM1-209ENST00000558072 V9GYY9 64 aa5.88□□□□□ -1.47
TPM1-209ENST00000558072 SMIM26A0A096LP01 95 aa5.85□□□□□ -1.47
TPM1-209ENST00000558072 PRR15LQ9BU68 103 aa5.85□□□□□ -1.47
TPM1-209ENST00000558072 KRTAP9-8Q9BYQ0 159 aa5.83□□□□□ -1.48
TPM1-209ENST00000558072 MT2AP02795 61 aa5.82□□□□□ -1.48
TPM1-209ENST00000558072 ADM2Q7Z4H4 148 aa5.82□□□□□ -1.48
TPM1-209ENST00000558072 A0A1B0GU69 56 aa5.81□□□□□ -1.48
TPM1-209ENST00000558072 CRIPTQ9P021 101 aa5.81□□□□□ -1.48
TPM1-209ENST00000558072 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
TPM1-209ENST00000558072 MT1FP04733 61 aa5.79□□□□□ -1.48
TPM1-209ENST00000558072 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
TPM1-209ENST00000558072 Q1T7F1 81 aa5.76□□□□□ -1.49
TPM1-209ENST00000558072 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
TPM1-209ENST00000558072 M0QZ58 72 aa5.71□□□□□ -1.5
TPM1-209ENST00000558072 R4GN34 69 aa5.7□□□□□ -1.5
TPM1-209ENST00000558072 P0C880 135 aa5.69□□□□□ -1.5
TPM1-209ENST00000558072 A0A1B0GU33 70 aa5.68□□□□□ -1.5
TPM1-209ENST00000558072 KRTAP9-2Q9BYQ4 174 aa5.65□□□□□ -1.5
TPM1-209ENST00000558072 KRTAP9-3Q9BYQ3 159 aa5.63□□□□□ -1.51
TPM1-209ENST00000558072 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.62□□□□□ -1.51
TPM1-209ENST00000558072 UQCR11O14957 56 aa5.62□□□□□ -1.51
TPM1-209ENST00000558072 Q5VV11 94 aa5.62□□□□□ -1.51
TPM1-209ENST00000558072 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
TPM1-209ENST00000558072 PSPHP1O15172 72 aa5.6□□□□□ -1.51
TPM1-209ENST00000558072 KRTAP9-6A0A140TA67 174 aa5.59□□□□□ -1.51
TPM1-209ENST00000558072 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
TPM1-209ENST00000558072 A6NED7 52 aa5.51□□□□□ -1.53
TPM1-209ENST00000558072 A6NN06 94 aa5.51□□□□□ -1.53
TPM1-209ENST00000558072 USH2AO75445 5202 aa5.5□□□□□ -1.53
TPM1-209ENST00000558072 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
TPM1-209ENST00000558072 LINC01554Q52M75 96 aa5.5□□□□□ -1.53
TPM1-209ENST00000558072 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
TPM1-209ENST00000558072 KRTAP19-8Q3LI54 63 aa5.48□□□□□ -1.53
TPM1-209ENST00000558072 SPATA8Q6RVD6 105 aa5.48□□□□□ -1.53
TPM1-209ENST00000558072 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
TPM1-209ENST00000558072 KRTAP13-4Q3LI77 160 aa5.46□□□□□ -1.54
TPM1-209ENST00000558072 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
TPM1-209ENST00000558072 K7ERS5 55 aa5.43□□□□□ -1.54
TPM1-209ENST00000558072 FSIP2Q5CZC0 6907 aa5.42□□□□□ -1.54
TPM1-209ENST00000558072 A0A0D9SG42 100 aa5.42□□□□□ -1.54
TPM1-209ENST00000558072 MT1BP07438 61 aa5.4□□□□□ -1.54
TPM1-209ENST00000558072 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
TPM1-209ENST00000558072 SSPOA2VEC9 5147 aa5.37□□□□□ -1.55
TPM1-209ENST00000558072 SPINT4Q6UDR6 99 aa5.36□□□□□ -1.55
TPM1-209ENST00000558072 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
TPM1-209ENST00000558072 A8MU10 97 aa5.35□□□□□ -1.55
TPM1-209ENST00000558072 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
TPM1-209ENST00000558072 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
TPM1-209ENST00000558072 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
TPM1-209ENST00000558072 CAMK2N1Q7Z7J9 78 aa5.32□□□□□ -1.56
TPM1-209ENST00000558072 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
TPM1-209ENST00000558072 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
TPM1-209ENST00000558072 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
TPM1-209ENST00000558072 BRK1Q8WUW1 75 aa5.26□□□□□ -1.57
TPM1-209ENST00000558072 KRTAP19-6Q3LI70 58 aa5.24□□□□□ -1.57
TPM1-209ENST00000558072 KRTAP10-5P60370 271 aa5.19□□□□□ -1.58
TPM1-209ENST00000558072 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
TPM1-209ENST00000558072 MT1XP80297 61 aa5.14□□□□□ -1.59
TPM1-209ENST00000558072 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
TPM1-209ENST00000558072 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
TPM1-209ENST00000558072 PRO0628Q9UI54 55 aa5.08□□□□□ -1.6
TPM1-209ENST00000558072 TNP1P09430 55 aa5.05□□□□□ -1.6
TPM1-209ENST00000558072 ROMO1P60602 79 aa5.04□□□□□ -1.6
TPM1-209ENST00000558072 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
TPM1-209ENST00000558072 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
TPM1-209ENST00000558072 PMAIP1Q13794 54 aa5□□□□□ -1.61
TPM1-209ENST00000558072 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
TPM1-209ENST00000558072 MACF1Q9UPN3 7388 aaKnown RBP4.95□□□□□ -1.62
TPM1-209ENST00000558072 KRTAP10-7P60409 375 aaPredicted RBP4.95□□□□□ -1.62
TPM1-209ENST00000558072 KRTAP10-12P60413 245 aa4.93□□□□□ -1.62
TPM1-209ENST00000558072 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
TPM1-209ENST00000558072 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
TPM1-209ENST00000558072 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.63
TPM1-209ENST00000558072 PP632Q6XCG6 107 aa4.84□□□□□ -1.63
TPM1-209ENST00000558072 KRTAP9-7A8MTY7 169 aa4.83□□□□□ -1.64
TPM1-209ENST00000558072 KMT2DO14686 5537 aa4.83□□□□□ -1.64
TPM1-209ENST00000558072 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
TPM1-209ENST00000558072 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
TPM1-209ENST00000558072 KRTAP8-1Q8IUC2 63 aa4.78□□□□□ -1.64
TPM1-209ENST00000558072 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms