RNA–Protein interactions for RNA: ENST00000491674.1

FXR1-221, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-221ENST00000491674 SNURFQ9Y675 71 aa7.89□□□□□ -1.15
FXR1-221ENST00000491674 KRTAP4-12Q9BQ66 201 aa7.88□□□□□ -1.15
FXR1-221ENST00000491674 KRTAP3-1Q9BYR8 98 aa7.88□□□□□ -1.15
FXR1-221ENST00000491674 A8MUN3 132 aa7.85□□□□□ -1.15
FXR1-221ENST00000491674 S4R3F8 94 aa7.8□□□□□ -1.16
FXR1-221ENST00000491674 NDUFC1O43677 76 aa7.75□□□□□ -1.17
FXR1-221ENST00000491674 KRTAP10-6P60371 365 aaPredicted RBP7.75□□□□□ -1.17
FXR1-221ENST00000491674 DMAC1Q96GE9 116 aa7.75□□□□□ -1.17
FXR1-221ENST00000491674 SPANXA2-OT1Q8N9U9 137 aa7.73□□□□□ -1.17
FXR1-221ENST00000491674 LCA10Q71F78 164 aa7.72□□□□□ -1.17
FXR1-221ENST00000491674 KRTAP19-1Q8IUB9 90 aa7.72□□□□□ -1.17
FXR1-221ENST00000491674 KRTAP9-9Q9BYP9 154 aa7.72□□□□□ -1.17
FXR1-221ENST00000491674 KRTAP9-4Q9BYQ2 154 aa7.72□□□□□ -1.17
FXR1-221ENST00000491674 CSAG1Q6PB30 78 aa7.71□□□□□ -1.18
FXR1-221ENST00000491674 ACYP2P14621 99 aa7.7□□□□□ -1.18
FXR1-221ENST00000491674 CCDC179H3BU77 68 aa7.67□□□□□ -1.18
FXR1-221ENST00000491674 H7BZZ5 65 aa7.64□□□□□ -1.19
FXR1-221ENST00000491674 KRTAP4-8A0A0G2JLE6 195 aa7.62□□□□□ -1.19
FXR1-221ENST00000491674 CYSTM1Q9H1C7 97 aa7.62□□□□□ -1.19
FXR1-221ENST00000491674 KRTAP9-8Q9BYQ0 159 aa7.6□□□□□ -1.19
FXR1-221ENST00000491674 CHKB-CPT1BH3BT56 60 aa7.58□□□□□ -1.2
FXR1-221ENST00000491674 SPTSSBQ8NFR3 76 aa7.56□□□□□ -1.2
FXR1-221ENST00000491674 MT2AP02795 61 aa7.55□□□□□ -1.2
FXR1-221ENST00000491674 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
FXR1-221ENST00000491674 ATP5EP56381 51 aaPredicted RBP7.49□□□□□ -1.21
FXR1-221ENST00000491674 COA5Q86WW8 74 aa7.49□□□□□ -1.21
FXR1-221ENST00000491674 MT1FP04733 61 aa7.48□□□□□ -1.21
FXR1-221ENST00000491674 H0YAA0 97 aa7.45□□□□□ -1.22
FXR1-221ENST00000491674 TMEM258P61165 79 aa7.45□□□□□ -1.22
FXR1-221ENST00000491674 PCP4P48539 62 aa7.4□□□□□ -1.22
FXR1-221ENST00000491674 LCE1DQ5T752 114 aa7.39□□□□□ -1.23
FXR1-221ENST00000491674 ADM2Q7Z4H4 148 aa7.39□□□□□ -1.23
FXR1-221ENST00000491674 KRTAP4-7Q9BYR0 210 aa7.36□□□□□ -1.23
FXR1-221ENST00000491674 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
FXR1-221ENST00000491674 CRIPTQ9P021 101 aa7.31□□□□□ -1.24
FXR1-221ENST00000491674 P0C880 135 aa7.25□□□□□ -1.25
FXR1-221ENST00000491674 SEC61GP60059 68 aa7.24□□□□□ -1.25
FXR1-221ENST00000491674 SERP1Q9Y6X1 66 aa7.22□□□□□ -1.25
FXR1-221ENST00000491674 SPRR2GQ9BYE4 73 aa7.2□□□□□ -1.26
FXR1-221ENST00000491674 R4GN34 69 aa7.19□□□□□ -1.26
FXR1-221ENST00000491674 KRTAP4-9Q9BYQ8 210 aa7.17□□□□□ -1.26
FXR1-221ENST00000491674 M0QZ58 72 aa7.14□□□□□ -1.27
FXR1-221ENST00000491674 A0A1B0GU69 56 aa7.12□□□□□ -1.27
FXR1-221ENST00000491674 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
FXR1-221ENST00000491674 Q5VV11 94 aa7.08□□□□□ -1.28
FXR1-221ENST00000491674 PRR15LQ9BU68 103 aa7.08□□□□□ -1.28
FXR1-221ENST00000491674 USH2AO75445 5202 aa7.07□□□□□ -1.28
FXR1-221ENST00000491674 LINC01558Q9Y6Z2 57 aa7.06□□□□□ -1.28
FXR1-221ENST00000491674 A0A1B0GU33 70 aa7.03□□□□□ -1.28
FXR1-221ENST00000491674 LCE4AQ5TA78 99 aa7.03□□□□□ -1.28
FXR1-221ENST00000491674 KRTAP4-2Q9BYR5 136 aa7.03□□□□□ -1.28
FXR1-221ENST00000491674 CRCT1Q9UGL9 99 aa7.03□□□□□ -1.28
FXR1-221ENST00000491674 LINC01554Q52M75 96 aa7.02□□□□□ -1.29
FXR1-221ENST00000491674 RPS28P62857 69 aaKnown RBP7□□□□□ -1.29
FXR1-221ENST00000491674 MT1BP07438 61 aa6.99□□□□□ -1.29
FXR1-221ENST00000491674 V9GYY9 64 aa6.99□□□□□ -1.29
FXR1-221ENST00000491674 SMIM26A0A096LP01 95 aa6.98□□□□□ -1.29
FXR1-221ENST00000491674 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
FXR1-221ENST00000491674 PLAC4Q8WY50 150 aa6.95□□□□□ -1.3
FXR1-221ENST00000491674 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
FXR1-221ENST00000491674 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
FXR1-221ENST00000491674 Q1T7F1 81 aa6.92□□□□□ -1.3
FXR1-221ENST00000491674 SSPOA2VEC9 5147 aa6.9□□□□□ -1.3
FXR1-221ENST00000491674 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
FXR1-221ENST00000491674 KRTAP4-11Q9BYQ6 195 aa6.9□□□□□ -1.3
FXR1-221ENST00000491674 SPATA8Q6RVD6 105 aa6.89□□□□□ -1.31
FXR1-221ENST00000491674 A6NN06 94 aa6.88□□□□□ -1.31
FXR1-221ENST00000491674 A0A0D9SG42 100 aa6.84□□□□□ -1.31
FXR1-221ENST00000491674 KRTAP9-7A8MTY7 169 aa6.84□□□□□ -1.31
FXR1-221ENST00000491674 UQCR11O14957 56 aa6.83□□□□□ -1.32
FXR1-221ENST00000491674 PSPHP1O15172 72 aa6.83□□□□□ -1.32
FXR1-221ENST00000491674 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
FXR1-221ENST00000491674 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
FXR1-221ENST00000491674 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
FXR1-221ENST00000491674 A8MU10 97 aa6.73□□□□□ -1.33
FXR1-221ENST00000491674 SPINT4Q6UDR6 99 aa6.73□□□□□ -1.33
FXR1-221ENST00000491674 FCGBPQ9Y6R7 5405 aaPredicted RBP6.72□□□□□ -1.33
FXR1-221ENST00000491674 MIR22HGQ0VDD5 57 aa6.7□□□□□ -1.34
FXR1-221ENST00000491674 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
FXR1-221ENST00000491674 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
FXR1-221ENST00000491674 MT1XP80297 61 aa6.67□□□□□ -1.34
FXR1-221ENST00000491674 A6NED7 52 aa6.66□□□□□ -1.34
FXR1-221ENST00000491674 KRTAP12-2P59991 146 aa6.63□□□□□ -1.35
FXR1-221ENST00000491674 H3BS24 57 aa6.61□□□□□ -1.35
FXR1-221ENST00000491674 K7ERS5 55 aa6.55□□□□□ -1.36
FXR1-221ENST00000491674 CDC42SE1Q9NRR8 79 aa6.45□□□□□ -1.38
FXR1-221ENST00000491674 MACF1Q9UPN3 7388 aaKnown RBP6.4□□□□□ -1.39
FXR1-221ENST00000491674 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
FXR1-221ENST00000491674 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
FXR1-221ENST00000491674 C10orf95Q9H7T3 257 aa6.34□□□□□ -1.39
FXR1-221ENST00000491674 KRTAP5-3Q6L8H2 238 aa6.32□□□□□ -1.4
FXR1-221ENST00000491674 TNP1P09430 55 aa6.29□□□□□ -1.4
FXR1-221ENST00000491674 KRTAP6-3Q3LI67 103 aa6.26□□□□□ -1.41
FXR1-221ENST00000491674 KRTAP8-1Q8IUC2 63 aa6.24□□□□□ -1.41
FXR1-221ENST00000491674 BRK1Q8WUW1 75 aa6.24□□□□□ -1.41
FXR1-221ENST00000491674 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
FXR1-221ENST00000491674 KMT2DO14686 5537 aa6.18□□□□□ -1.42
FXR1-221ENST00000491674 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
FXR1-221ENST00000491674 KRTAP5-9P26371 169 aa6.14□□□□□ -1.43
FXR1-221ENST00000491674 ROMO1P60602 79 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms