RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 NDUFC1O43677 76 aa5.3□□□□□ -1.56
FN1-214ENST00000460217 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
FN1-214ENST00000460217 MT1HP80294 61 aa5.29□□□□□ -1.56
FN1-214ENST00000460217 SPANXA2-OT1Q8N9U9 137 aa5.29□□□□□ -1.56
FN1-214ENST00000460217 DMAC1Q96GE9 116 aa5.28□□□□□ -1.56
FN1-214ENST00000460217 CCDC179H3BU77 68 aa5.27□□□□□ -1.57
FN1-214ENST00000460217 H7BZZ5 65 aa5.27□□□□□ -1.57
FN1-214ENST00000460217 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
FN1-214ENST00000460217 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
FN1-214ENST00000460217 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
FN1-214ENST00000460217 S4R3F8 94 aa5.21□□□□□ -1.58
FN1-214ENST00000460217 M0R2T5 61 aa5.2□□□□□ -1.58
FN1-214ENST00000460217 ACYP2P14621 99 aa5.2□□□□□ -1.58
FN1-214ENST00000460217 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
FN1-214ENST00000460217 LCA10Q71F78 164 aa5.18□□□□□ -1.58
FN1-214ENST00000460217 KRTAP9-2Q9BYQ4 174 aa5.17□□□□□ -1.58
FN1-214ENST00000460217 PCP4P48539 62 aa5.15□□□□□ -1.59
FN1-214ENST00000460217 ATP5EP56381 51 aaPredicted RBP5.14□□□□□ -1.59
FN1-214ENST00000460217 KRTAP10-6P60371 365 aaPredicted RBP5.14□□□□□ -1.59
FN1-214ENST00000460217 TMEM258P61165 79 aa5.14□□□□□ -1.59
FN1-214ENST00000460217 CSAG1Q6PB30 78 aa5.14□□□□□ -1.59
FN1-214ENST00000460217 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.13□□□□□ -1.59
FN1-214ENST00000460217 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
FN1-214ENST00000460217 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
FN1-214ENST00000460217 CHKB-CPT1BH3BT56 60 aa5.08□□□□□ -1.6
FN1-214ENST00000460217 COA5Q86WW8 74 aa5.08□□□□□ -1.6
FN1-214ENST00000460217 SPTSSBQ8NFR3 76 aa5.07□□□□□ -1.6
FN1-214ENST00000460217 KRTAP9-8Q9BYQ0 159 aa5.07□□□□□ -1.6
FN1-214ENST00000460217 H0YAA0 97 aa5.04□□□□□ -1.6
FN1-214ENST00000460217 MT2AP02795 61 aa5.03□□□□□ -1.6
FN1-214ENST00000460217 MT1FP04733 61 aa4.99□□□□□ -1.61
FN1-214ENST00000460217 KRTAP10-10P60014 251 aa4.96□□□□□ -1.62
FN1-214ENST00000460217 SERP1Q9Y6X1 66 aa4.96□□□□□ -1.62
FN1-214ENST00000460217 ADM2Q7Z4H4 148 aa4.95□□□□□ -1.62
FN1-214ENST00000460217 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
FN1-214ENST00000460217 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
FN1-214ENST00000460217 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
FN1-214ENST00000460217 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
FN1-214ENST00000460217 CRIPTQ9P021 101 aa4.9□□□□□ -1.63
FN1-214ENST00000460217 P0C880 135 aa4.89□□□□□ -1.63
FN1-214ENST00000460217 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
FN1-214ENST00000460217 RPS28P62857 69 aaKnown RBP4.87□□□□□ -1.63
FN1-214ENST00000460217 SEC61GP60059 68 aa4.86□□□□□ -1.63
FN1-214ENST00000460217 SPRR2GQ9BYE4 73 aa4.84□□□□□ -1.63
FN1-214ENST00000460217 LINC01558Q9Y6Z2 57 aa4.83□□□□□ -1.64
FN1-214ENST00000460217 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
FN1-214ENST00000460217 A0A1B0GU69 56 aa4.81□□□□□ -1.64
FN1-214ENST00000460217 SMIM26A0A096LP01 95 aa4.8□□□□□ -1.64
FN1-214ENST00000460217 R4GN34 69 aa4.8□□□□□ -1.64
FN1-214ENST00000460217 M0QZ58 72 aa4.78□□□□□ -1.64
FN1-214ENST00000460217 PRR15LQ9BU68 103 aa4.78□□□□□ -1.64
FN1-214ENST00000460217 V9GYY9 64 aa4.78□□□□□ -1.64
FN1-214ENST00000460217 Q1T7F1 81 aa4.77□□□□□ -1.65
FN1-214ENST00000460217 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
FN1-214ENST00000460217 A0A1B0GU33 70 aa4.75□□□□□ -1.65
FN1-214ENST00000460217 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
FN1-214ENST00000460217 Q5VV11 94 aa4.73□□□□□ -1.65
FN1-214ENST00000460217 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
FN1-214ENST00000460217 MT1BP07438 61 aa4.68□□□□□ -1.66
FN1-214ENST00000460217 USH2AO75445 5202 aa4.68□□□□□ -1.66
FN1-214ENST00000460217 PSPHP1O15172 72 aa4.66□□□□□ -1.66
FN1-214ENST00000460217 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
FN1-214ENST00000460217 A6NN06 94 aa4.65□□□□□ -1.67
FN1-214ENST00000460217 SPATA8Q6RVD6 105 aa4.65□□□□□ -1.67
FN1-214ENST00000460217 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.67
FN1-214ENST00000460217 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
FN1-214ENST00000460217 UQCR11O14957 56 aa4.63□□□□□ -1.67
FN1-214ENST00000460217 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
FN1-214ENST00000460217 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
FN1-214ENST00000460217 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
FN1-214ENST00000460217 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
FN1-214ENST00000460217 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
FN1-214ENST00000460217 A0A0D9SG42 100 aa4.58□□□□□ -1.68
FN1-214ENST00000460217 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
FN1-214ENST00000460217 SSPOA2VEC9 5147 aa4.57□□□□□ -1.68
FN1-214ENST00000460217 A8MU10 97 aa4.55□□□□□ -1.68
FN1-214ENST00000460217 MIR22HGQ0VDD5 57 aa4.55□□□□□ -1.68
FN1-214ENST00000460217 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
FN1-214ENST00000460217 A6NED7 52 aa4.53□□□□□ -1.68
FN1-214ENST00000460217 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
FN1-214ENST00000460217 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
FN1-214ENST00000460217 KRTAP12-2P59991 146 aa4.49□□□□□ -1.69
FN1-214ENST00000460217 SPINT4Q6UDR6 99 aa4.49□□□□□ -1.69
FN1-214ENST00000460217 MT1XP80297 61 aa4.48□□□□□ -1.69
FN1-214ENST00000460217 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
FN1-214ENST00000460217 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
FN1-214ENST00000460217 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
FN1-214ENST00000460217 CDC42SE1Q9NRR8 79 aa4.44□□□□□ -1.7
FN1-214ENST00000460217 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
FN1-214ENST00000460217 K7ERS5 55 aa4.4□□□□□ -1.71
FN1-214ENST00000460217 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
FN1-214ENST00000460217 C10orf95Q9H7T3 257 aa4.3□□□□□ -1.72
FN1-214ENST00000460217 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
FN1-214ENST00000460217 KRTAP10-7P60409 375 aaPredicted RBP4.27□□□□□ -1.73
FN1-214ENST00000460217 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
FN1-214ENST00000460217 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
FN1-214ENST00000460217 TNP1P09430 55 aa4.22□□□□□ -1.73
FN1-214ENST00000460217 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
FN1-214ENST00000460217 ROMO1P60602 79 aa4.17□□□□□ -1.74
FN1-214ENST00000460217 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms