RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 C4orf26Q17RF5 130 aa5.3□□□□□ -1.56
MDC1-205ENST00000425072 COX6B2Q6YFQ2 88 aa5.29□□□□□ -1.56
MDC1-205ENST00000425072 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
MDC1-205ENST00000425072 A8MUN3 132 aa5.28□□□□□ -1.56
MDC1-205ENST00000425072 KRTAP4-12Q9BQ66 201 aa5.27□□□□□ -1.57
MDC1-205ENST00000425072 KRTAP4-1Q9BYQ7 146 aa5.27□□□□□ -1.57
MDC1-205ENST00000425072 ACYP2P14621 99 aa5.26□□□□□ -1.57
MDC1-205ENST00000425072 TMEM258P61165 79 aa5.26□□□□□ -1.57
MDC1-205ENST00000425072 MPLKIPQ8TAP9 179 aa5.26□□□□□ -1.57
MDC1-205ENST00000425072 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
MDC1-205ENST00000425072 FAM236DA0A1B0GTK5 79 aa5.25□□□□□ -1.57
MDC1-205ENST00000425072 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
MDC1-205ENST00000425072 FAM236CP0DP71 79 aa5.25□□□□□ -1.57
MDC1-205ENST00000425072 ATP5EP56381 51 aaPredicted RBP5.25□□□□□ -1.57
MDC1-205ENST00000425072 MUC17Q685J3 4493 aa5.25□□□□□ -1.57
MDC1-205ENST00000425072 H1FX-AS1Q4G0G2 97 aa5.22□□□□□ -1.57
MDC1-205ENST00000425072 DMAC1Q96GE9 116 aa5.22□□□□□ -1.57
MDC1-205ENST00000425072 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.17□□□□□ -1.58
MDC1-205ENST00000425072 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
MDC1-205ENST00000425072 CHKB-CPT1BH3BT56 60 aa5.14□□□□□ -1.59
MDC1-205ENST00000425072 SPTSSBQ8NFR3 76 aa5.13□□□□□ -1.59
MDC1-205ENST00000425072 KRTAP19-2Q3LHN2 52 aa5.12□□□□□ -1.59
MDC1-205ENST00000425072 S4R3F8 94 aa5.12□□□□□ -1.59
MDC1-205ENST00000425072 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
MDC1-205ENST00000425072 COA5Q86WW8 74 aa5.1□□□□□ -1.59
MDC1-205ENST00000425072 SERP1Q9Y6X1 66 aa5.1□□□□□ -1.59
MDC1-205ENST00000425072 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
MDC1-205ENST00000425072 CSAG1Q6PB30 78 aa5.08□□□□□ -1.6
MDC1-205ENST00000425072 LCA10Q71F78 164 aa5.06□□□□□ -1.6
MDC1-205ENST00000425072 M0R2T5 61 aa5.02□□□□□ -1.61
MDC1-205ENST00000425072 SMIM26A0A096LP01 95 aa4.98□□□□□ -1.61
MDC1-205ENST00000425072 MT1HP80294 61 aa4.98□□□□□ -1.61
MDC1-205ENST00000425072 SEC61GP60059 68 aa4.96□□□□□ -1.62
MDC1-205ENST00000425072 V9GYY9 64 aa4.96□□□□□ -1.62
MDC1-205ENST00000425072 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.62
MDC1-205ENST00000425072 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
MDC1-205ENST00000425072 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
MDC1-205ENST00000425072 H0YAA0 97 aa4.92□□□□□ -1.62
MDC1-205ENST00000425072 LINC01558Q9Y6Z2 57 aa4.91□□□□□ -1.62
MDC1-205ENST00000425072 PRR15LQ9BU68 103 aa4.9□□□□□ -1.63
MDC1-205ENST00000425072 Q1T7F1 81 aa4.89□□□□□ -1.63
MDC1-205ENST00000425072 A0A1B0GU69 56 aa4.88□□□□□ -1.63
MDC1-205ENST00000425072 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
MDC1-205ENST00000425072 KRTAP10-6P60371 365 aaPredicted RBP4.84□□□□□ -1.63
MDC1-205ENST00000425072 KRTAP9-3Q9BYQ3 159 aa4.84□□□□□ -1.63
MDC1-205ENST00000425072 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
MDC1-205ENST00000425072 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
MDC1-205ENST00000425072 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
MDC1-205ENST00000425072 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
MDC1-205ENST00000425072 CRIPTQ9P021 101 aa4.8□□□□□ -1.64
MDC1-205ENST00000425072 KRTAP4-8A0A0G2JLE6 195 aa4.79□□□□□ -1.64
MDC1-205ENST00000425072 A0A1B0GU33 70 aa4.79□□□□□ -1.64
MDC1-205ENST00000425072 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
MDC1-205ENST00000425072 P0C880 135 aa4.78□□□□□ -1.64
MDC1-205ENST00000425072 SYNE2Q8WXH0 6885 aaKnown RBP4.77□□□□□ -1.65
MDC1-205ENST00000425072 M0QZ58 72 aa4.76□□□□□ -1.65
MDC1-205ENST00000425072 PSPHP1O15172 72 aa4.76□□□□□ -1.65
MDC1-205ENST00000425072 MT2AP02795 61 aa4.76□□□□□ -1.65
MDC1-205ENST00000425072 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
MDC1-205ENST00000425072 R4GN34 69 aa4.74□□□□□ -1.65
MDC1-205ENST00000425072 UQCR11O14957 56 aa4.73□□□□□ -1.65
MDC1-205ENST00000425072 MACF1Q9UPN3 7388 aaKnown RBP4.71□□□□□ -1.66
MDC1-205ENST00000425072 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
MDC1-205ENST00000425072 MT1FP04733 61 aa4.71□□□□□ -1.66
MDC1-205ENST00000425072 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
MDC1-205ENST00000425072 Q5VV11 94 aa4.71□□□□□ -1.66
MDC1-205ENST00000425072 USH2AO75445 5202 aa4.67□□□□□ -1.66
MDC1-205ENST00000425072 A6NED7 52 aa4.66□□□□□ -1.66
MDC1-205ENST00000425072 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.67
MDC1-205ENST00000425072 MIR22HGQ0VDD5 57 aa4.64□□□□□ -1.67
MDC1-205ENST00000425072 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
MDC1-205ENST00000425072 KRTAP13-4Q3LI77 160 aa4.6□□□□□ -1.67
MDC1-205ENST00000425072 LINC01554Q52M75 96 aa4.6□□□□□ -1.67
MDC1-205ENST00000425072 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
MDC1-205ENST00000425072 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
MDC1-205ENST00000425072 A6NN06 94 aa4.57□□□□□ -1.68
MDC1-205ENST00000425072 A0A0D9SG42 100 aa4.56□□□□□ -1.68
MDC1-205ENST00000425072 CDC42SE1Q9NRR8 79 aa4.56□□□□□ -1.68
MDC1-205ENST00000425072 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
MDC1-205ENST00000425072 K7ERS5 55 aa4.54□□□□□ -1.68
MDC1-205ENST00000425072 KRTAP19-8Q3LI54 63 aa4.54□□□□□ -1.68
MDC1-205ENST00000425072 NEBP20929 6669 aa4.53□□□□□ -1.68
MDC1-205ENST00000425072 A8MU10 97 aa4.53□□□□□ -1.68
MDC1-205ENST00000425072 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
MDC1-205ENST00000425072 SPINT4Q6UDR6 99 aa4.51□□□□□ -1.69
MDC1-205ENST00000425072 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
MDC1-205ENST00000425072 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
MDC1-205ENST00000425072 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
MDC1-205ENST00000425072 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
MDC1-205ENST00000425072 MT1BP07438 61 aa4.43□□□□□ -1.7
MDC1-205ENST00000425072 KRTAP12-2P59991 146 aa4.43□□□□□ -1.7
MDC1-205ENST00000425072 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
MDC1-205ENST00000425072 MUC12Q9UKN1 5478 aa4.41□□□□□ -1.7
MDC1-205ENST00000425072 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
MDC1-205ENST00000425072 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
MDC1-205ENST00000425072 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
MDC1-205ENST00000425072 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
MDC1-205ENST00000425072 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
MDC1-205ENST00000425072 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
MDC1-205ENST00000425072 KMT2DO14686 5537 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms