RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 COX7CP15954 63 aa4.94□□□□□ -1.62
HDLBP-209ENST00000422933 KLKP1Q107X0 134 aa4.94□□□□□ -1.62
HDLBP-209ENST00000422933 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
HDLBP-209ENST00000422933 S4R3F8 94 aa4.92□□□□□ -1.62
HDLBP-209ENST00000422933 FLGP20930 4061 aaPredicted RBP4.91□□□□□ -1.62
HDLBP-209ENST00000422933 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
HDLBP-209ENST00000422933 NDUFC1O43677 76 aa4.89□□□□□ -1.63
HDLBP-209ENST00000422933 ACYP2P14621 99 aa4.87□□□□□ -1.63
HDLBP-209ENST00000422933 CSAG1Q6PB30 78 aa4.87□□□□□ -1.63
HDLBP-209ENST00000422933 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
HDLBP-209ENST00000422933 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
HDLBP-209ENST00000422933 DMAC1Q96GE9 116 aa4.85□□□□□ -1.63
HDLBP-209ENST00000422933 KRTAP10-6P60371 365 aaPredicted RBP4.84□□□□□ -1.63
HDLBP-209ENST00000422933 LCA10Q71F78 164 aa4.83□□□□□ -1.64
HDLBP-209ENST00000422933 SPTSSBQ8NFR3 76 aa4.82□□□□□ -1.64
HDLBP-209ENST00000422933 CHKB-CPT1BH3BT56 60 aa4.81□□□□□ -1.64
HDLBP-209ENST00000422933 LCE3BQ5TA77 95 aa4.81□□□□□ -1.64
HDLBP-209ENST00000422933 CCDC179H3BU77 68 aa4.76□□□□□ -1.65
HDLBP-209ENST00000422933 H7BZZ5 65 aa4.75□□□□□ -1.65
HDLBP-209ENST00000422933 KRTAP10-10P60014 251 aa4.74□□□□□ -1.65
HDLBP-209ENST00000422933 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
HDLBP-209ENST00000422933 ATP5EP56381 51 aaPredicted RBP4.73□□□□□ -1.65
HDLBP-209ENST00000422933 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
HDLBP-209ENST00000422933 MT2AP02795 61 aa4.69□□□□□ -1.66
HDLBP-209ENST00000422933 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
HDLBP-209ENST00000422933 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
HDLBP-209ENST00000422933 H0YAA0 97 aa4.68□□□□□ -1.66
HDLBP-209ENST00000422933 TMEM258P61165 79 aa4.68□□□□□ -1.66
HDLBP-209ENST00000422933 COA5Q86WW8 74 aa4.68□□□□□ -1.66
HDLBP-209ENST00000422933 CYSTM1Q9H1C7 97 aa4.68□□□□□ -1.66
HDLBP-209ENST00000422933 KRTAP4-8A0A0G2JLE6 195 aa4.66□□□□□ -1.66
HDLBP-209ENST00000422933 MT1FP04733 61 aa4.64□□□□□ -1.67
HDLBP-209ENST00000422933 ADM2Q7Z4H4 148 aa4.64□□□□□ -1.67
HDLBP-209ENST00000422933 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
HDLBP-209ENST00000422933 SEC61GP60059 68 aa4.63□□□□□ -1.67
HDLBP-209ENST00000422933 CRIPTQ9P021 101 aa4.63□□□□□ -1.67
HDLBP-209ENST00000422933 PCP4P48539 62 aa4.61□□□□□ -1.67
HDLBP-209ENST00000422933 KRTAP19-1Q8IUB9 90 aa4.6□□□□□ -1.67
HDLBP-209ENST00000422933 SERP1Q9Y6X1 66 aa4.59□□□□□ -1.67
HDLBP-209ENST00000422933 USH2AO75445 5202 aa4.58□□□□□ -1.68
HDLBP-209ENST00000422933 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
HDLBP-209ENST00000422933 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
HDLBP-209ENST00000422933 R4GN34 69 aa4.55□□□□□ -1.68
HDLBP-209ENST00000422933 P0C880 135 aa4.51□□□□□ -1.69
HDLBP-209ENST00000422933 PRR15LQ9BU68 103 aa4.51□□□□□ -1.69
HDLBP-209ENST00000422933 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
HDLBP-209ENST00000422933 A0A1B0GU69 56 aa4.5□□□□□ -1.69
HDLBP-209ENST00000422933 M0QZ58 72 aa4.5□□□□□ -1.69
HDLBP-209ENST00000422933 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
HDLBP-209ENST00000422933 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
HDLBP-209ENST00000422933 MACF1Q9UPN3 7388 aaKnown RBP4.48□□□□□ -1.69
HDLBP-209ENST00000422933 Q5VV11 94 aa4.47□□□□□ -1.69
HDLBP-209ENST00000422933 V9GYY9 64 aa4.44□□□□□ -1.7
HDLBP-209ENST00000422933 A0A1B0GU33 70 aa4.43□□□□□ -1.7
HDLBP-209ENST00000422933 LINC01554Q52M75 96 aa4.43□□□□□ -1.7
HDLBP-209ENST00000422933 PLAC4Q8WY50 150 aa4.42□□□□□ -1.7
HDLBP-209ENST00000422933 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
HDLBP-209ENST00000422933 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
HDLBP-209ENST00000422933 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.71
HDLBP-209ENST00000422933 SMIM26A0A096LP01 95 aa4.39□□□□□ -1.71
HDLBP-209ENST00000422933 RPS28P62857 69 aaKnown RBP4.39□□□□□ -1.71
HDLBP-209ENST00000422933 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
HDLBP-209ENST00000422933 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
HDLBP-209ENST00000422933 KRTAP6-3Q3LI67 103 aa4.34□□□□□ -1.71
HDLBP-209ENST00000422933 Q1T7F1 81 aa4.33□□□□□ -1.72
HDLBP-209ENST00000422933 A6NN06 94 aa4.32□□□□□ -1.72
HDLBP-209ENST00000422933 UQCR11O14957 56 aa4.32□□□□□ -1.72
HDLBP-209ENST00000422933 MT1BP07438 61 aa4.32□□□□□ -1.72
HDLBP-209ENST00000422933 SPATA8Q6RVD6 105 aa4.31□□□□□ -1.72
HDLBP-209ENST00000422933 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
HDLBP-209ENST00000422933 A0A0D9SG42 100 aa4.3□□□□□ -1.72
HDLBP-209ENST00000422933 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
HDLBP-209ENST00000422933 KRTAP13-4Q3LI77 160 aa4.29□□□□□ -1.72
HDLBP-209ENST00000422933 PSPHP1O15172 72 aa4.28□□□□□ -1.72
HDLBP-209ENST00000422933 SPINT4Q6UDR6 99 aa4.25□□□□□ -1.73
HDLBP-209ENST00000422933 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
HDLBP-209ENST00000422933 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
HDLBP-209ENST00000422933 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
HDLBP-209ENST00000422933 MIR22HGQ0VDD5 57 aa4.22□□□□□ -1.73
HDLBP-209ENST00000422933 A6NED7 52 aa4.2□□□□□ -1.74
HDLBP-209ENST00000422933 K7ERS5 55 aa4.2□□□□□ -1.74
HDLBP-209ENST00000422933 NEBP20929 6669 aa4.2□□□□□ -1.74
HDLBP-209ENST00000422933 A8MU10 97 aa4.18□□□□□ -1.74
HDLBP-209ENST00000422933 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
HDLBP-209ENST00000422933 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
HDLBP-209ENST00000422933 MT1XP80297 61 aa4.13□□□□□ -1.75
HDLBP-209ENST00000422933 KRTAP12-2P59991 146 aa4.12□□□□□ -1.75
HDLBP-209ENST00000422933 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
HDLBP-209ENST00000422933 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
HDLBP-209ENST00000422933 CDC42SE1Q9NRR8 79 aa4.05□□□□□ -1.76
HDLBP-209ENST00000422933 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
HDLBP-209ENST00000422933 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
HDLBP-209ENST00000422933 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
HDLBP-209ENST00000422933 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
HDLBP-209ENST00000422933 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
HDLBP-209ENST00000422933 TNP1P09430 55 aa3.99□□□□□ -1.77
HDLBP-209ENST00000422933 KMT2DO14686 5537 aa3.97□□□□□ -1.77
HDLBP-209ENST00000422933 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
HDLBP-209ENST00000422933 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
HDLBP-209ENST00000422933 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms