RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 DMAC1Q96GE9 116 aa6.85□□□□□ -1.31
UPK1A-202ENST00000379013 S4R3F8 94 aa6.84□□□□□ -1.31
UPK1A-202ENST00000379013 ACYP2P14621 99 aa6.83□□□□□ -1.32
UPK1A-202ENST00000379013 USH2AO75445 5202 aa6.82□□□□□ -1.32
UPK1A-202ENST00000379013 CCDC179H3BU77 68 aa6.81□□□□□ -1.32
UPK1A-202ENST00000379013 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
UPK1A-202ENST00000379013 H7BZZ5 65 aa6.8□□□□□ -1.32
UPK1A-202ENST00000379013 KRTAP9-8Q9BYQ0 159 aa6.8□□□□□ -1.32
UPK1A-202ENST00000379013 ATP5EP56381 51 aaPredicted RBP6.78□□□□□ -1.32
UPK1A-202ENST00000379013 SSPOA2VEC9 5147 aa6.77□□□□□ -1.32
UPK1A-202ENST00000379013 CSAG1Q6PB30 78 aa6.74□□□□□ -1.33
UPK1A-202ENST00000379013 SPTSSBQ8NFR3 76 aa6.74□□□□□ -1.33
UPK1A-202ENST00000379013 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
UPK1A-202ENST00000379013 LCA10Q71F78 164 aa6.73□□□□□ -1.33
UPK1A-202ENST00000379013 TMEM258P61165 79 aa6.72□□□□□ -1.33
UPK1A-202ENST00000379013 CYSTM1Q9H1C7 97 aa6.72□□□□□ -1.33
UPK1A-202ENST00000379013 MT2AP02795 61 aa6.67□□□□□ -1.34
UPK1A-202ENST00000379013 MT1FP04733 61 aa6.62□□□□□ -1.35
UPK1A-202ENST00000379013 COA5Q86WW8 74 aa6.62□□□□□ -1.35
UPK1A-202ENST00000379013 KRTAP3-3Q9BYR6 98 aa6.61□□□□□ -1.35
UPK1A-202ENST00000379013 FCGBPQ9Y6R7 5405 aaPredicted RBP6.6□□□□□ -1.35
UPK1A-202ENST00000379013 LCE2BO14633 110 aa6.58□□□□□ -1.36
UPK1A-202ENST00000379013 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
UPK1A-202ENST00000379013 RPS28P62857 69 aaKnown RBP6.57□□□□□ -1.36
UPK1A-202ENST00000379013 H0YAA0 97 aa6.56□□□□□ -1.36
UPK1A-202ENST00000379013 KRTAP10-10P60014 251 aa6.51□□□□□ -1.37
UPK1A-202ENST00000379013 SERP1Q9Y6X1 66 aa6.48□□□□□ -1.37
UPK1A-202ENST00000379013 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.46□□□□□ -1.38
UPK1A-202ENST00000379013 SEC61GP60059 68 aa6.46□□□□□ -1.38
UPK1A-202ENST00000379013 ADM2Q7Z4H4 148 aa6.45□□□□□ -1.38
UPK1A-202ENST00000379013 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
UPK1A-202ENST00000379013 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
UPK1A-202ENST00000379013 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
UPK1A-202ENST00000379013 PRR15LQ9BU68 103 aa6.36□□□□□ -1.39
UPK1A-202ENST00000379013 SYNE2Q8WXH0 6885 aaKnown RBP6.36□□□□□ -1.39
UPK1A-202ENST00000379013 A0A1B0GU69 56 aa6.34□□□□□ -1.39
UPK1A-202ENST00000379013 V9GYY9 64 aa6.33□□□□□ -1.4
UPK1A-202ENST00000379013 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
UPK1A-202ENST00000379013 R4GN34 69 aa6.32□□□□□ -1.4
UPK1A-202ENST00000379013 P0C880 135 aa6.3□□□□□ -1.4
UPK1A-202ENST00000379013 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
UPK1A-202ENST00000379013 KRTAP3-2Q9BYR7 98 aa6.29□□□□□ -1.4
UPK1A-202ENST00000379013 SMIM26A0A096LP01 95 aa6.28□□□□□ -1.4
UPK1A-202ENST00000379013 SVIPQ8NHG7 77 aa6.28□□□□□ -1.4
UPK1A-202ENST00000379013 LINC01558Q9Y6Z2 57 aa6.28□□□□□ -1.4
UPK1A-202ENST00000379013 M0QZ58 72 aa6.27□□□□□ -1.41
UPK1A-202ENST00000379013 SPRR2GQ9BYE4 73 aa6.25□□□□□ -1.41
UPK1A-202ENST00000379013 A0A1B0GU33 70 aa6.21□□□□□ -1.42
UPK1A-202ENST00000379013 Q1T7F1 81 aa6.21□□□□□ -1.42
UPK1A-202ENST00000379013 Q5VV11 94 aa6.19□□□□□ -1.42
UPK1A-202ENST00000379013 KRTAP19-8Q3LI54 63 aa6.12□□□□□ -1.43
UPK1A-202ENST00000379013 UQCR11O14957 56 aa6.11□□□□□ -1.43
UPK1A-202ENST00000379013 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
UPK1A-202ENST00000379013 MT1BP07438 61 aa6.08□□□□□ -1.44
UPK1A-202ENST00000379013 PLAC4Q8WY50 150 aa6.08□□□□□ -1.44
UPK1A-202ENST00000379013 A6NN06 94 aa6.07□□□□□ -1.44
UPK1A-202ENST00000379013 PSPHP1O15172 72 aa6.07□□□□□ -1.44
UPK1A-202ENST00000379013 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
UPK1A-202ENST00000379013 SPATA8Q6RVD6 105 aa6.03□□□□□ -1.44
UPK1A-202ENST00000379013 KRTAP6-3Q3LI67 103 aa6□□□□□ -1.45
UPK1A-202ENST00000379013 A0A0D9SG42 100 aa5.98□□□□□ -1.45
UPK1A-202ENST00000379013 A6NED7 52 aa5.97□□□□□ -1.45
UPK1A-202ENST00000379013 MIR22HGQ0VDD5 57 aa5.97□□□□□ -1.45
UPK1A-202ENST00000379013 PRO0628Q9UI54 55 aa5.97□□□□□ -1.45
UPK1A-202ENST00000379013 NEBP20929 6669 aa5.97□□□□□ -1.45
UPK1A-202ENST00000379013 MUC12Q9UKN1 5478 aa5.96□□□□□ -1.45
UPK1A-202ENST00000379013 PRO2289Q9P1D8 64 aa5.93□□□□□ -1.46
UPK1A-202ENST00000379013 K7ERS5 55 aa5.9□□□□□ -1.46
UPK1A-202ENST00000379013 SPINT4Q6UDR6 99 aa5.9□□□□□ -1.46
UPK1A-202ENST00000379013 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
UPK1A-202ENST00000379013 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
UPK1A-202ENST00000379013 A8MU10 97 aa5.88□□□□□ -1.47
UPK1A-202ENST00000379013 BRK1Q8WUW1 75 aa5.86□□□□□ -1.47
UPK1A-202ENST00000379013 KRTAP12-1P59990 96 aa5.85□□□□□ -1.47
UPK1A-202ENST00000379013 KMT2DO14686 5537 aa5.83□□□□□ -1.48
UPK1A-202ENST00000379013 MDN1Q9NU22 5596 aa5.82□□□□□ -1.48
UPK1A-202ENST00000379013 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
UPK1A-202ENST00000379013 CDC42SE1Q9NRR8 79 aa5.8□□□□□ -1.48
UPK1A-202ENST00000379013 MT1XP80297 61 aa5.75□□□□□ -1.49
UPK1A-202ENST00000379013 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
UPK1A-202ENST00000379013 TNP1P09430 55 aa5.56□□□□□ -1.52
UPK1A-202ENST00000379013 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
UPK1A-202ENST00000379013 KRTAP20-1Q3LI63 56 aa5.55□□□□□ -1.52
UPK1A-202ENST00000379013 C10orf95Q9H7T3 257 aa5.52□□□□□ -1.53
UPK1A-202ENST00000379013 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
UPK1A-202ENST00000379013 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
UPK1A-202ENST00000379013 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
UPK1A-202ENST00000379013 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
UPK1A-202ENST00000379013 KRTAP10-7P60409 375 aaPredicted RBP5.48□□□□□ -1.53
UPK1A-202ENST00000379013 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
UPK1A-202ENST00000379013 KTN1-AS1Q86SY8 53 aa5.48□□□□□ -1.53
UPK1A-202ENST00000379013 ROMO1P60602 79 aa5.47□□□□□ -1.53
UPK1A-202ENST00000379013 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
UPK1A-202ENST00000379013 SPRR2EP22531 72 aa5.43□□□□□ -1.54
UPK1A-202ENST00000379013 SPRR2BP35325 72 aa5.43□□□□□ -1.54
UPK1A-202ENST00000379013 SPRR2AP35326 72 aa5.43□□□□□ -1.54
UPK1A-202ENST00000379013 KRTAP2-3P0C7H8 128 aa5.41□□□□□ -1.54
UPK1A-202ENST00000379013 LCE1AQ5T7P2 110 aa5.41□□□□□ -1.54
UPK1A-202ENST00000379013 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
UPK1A-202ENST00000379013 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms