RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 SpaarA0A1B0GSZ0 75 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Dkk2Q9QYZ8 259 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Abca6Q8K441 1624 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Myh4Q5SX39 1939 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ighv6-7A0A0A6YWU3 119 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 B430305J03RikQ8BQQ8 176 aa6.78□□□□□ -1.32
Clcn3-202ENSMUST00000056508 P03976 113 aa6.78□□□□□ -1.32
Clcn3-202ENSMUST00000056508 CrygaP04345 174 aa6.78□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Gnb2P62880 340 aa6.78□□□□□ -1.32
Clcn3-202ENSMUST00000056508 GchfrP99025 84 aa6.78□□□□□ -1.32
Clcn3-202ENSMUST00000056508 9930022D16RikQ8BG27 128 aa6.78□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Limd2Q8BGB5 128 aa6.78□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Cox7b2Q9D2H1 82 aa6.78□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Rbbp6P97868 1790 aaKnown RBP6.78□□□□□ -1.32
Clcn3-202ENSMUST00000056508 C5P06684 1680 aa6.78□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Duox1A2AQ92 1551 aa6.78□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ighv1-62-1A0A075B5U3 116 aa6.78□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Myh9Q8VDD5 1960 aaKnown RBP6.77□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Igkv17-121A0A0G2JFA8 117 aa6.77□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm10837Q3UTT8 145 aa6.77□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Myh8P13542 1937 aa6.77□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Ighv5-9A0A075B5Q2 117 aa6.77□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Pate1E9Q658 125 aa6.77□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Efna4O08542 206 aa6.77□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Myh3P13541 1940 aa6.77□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Csn3P06796 181 aa6.77□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm5153P01627 120 aa6.77□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Defb43Q30KM9 69 aa6.77□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Defb29Q8BGW9 78 aa6.77□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm5617Q91VN2 117 aa6.77□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Pom121l12A0A1B0GSJ4 278 aa6.76□□□□□ -1.33
Clcn3-202ENSMUST00000056508 HcrtO55241 130 aa6.76□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Lypd1Q8BLC3 141 aa6.76□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Trdv5A0A075B661 115 aa6.76□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Cypt15B1AXS0 87 aa6.76□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm5571P01639 130 aa6.76□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Zfp11P10751 647 aa6.76□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Bri3P28662 125 aa6.76□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Phrf1A6H619 1682 aa6.76□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Rpl36-ps4A0A140T8U4 117 aa6.76□□□□□ -1.33
Clcn3-202ENSMUST00000056508 P01755 137 aa6.76□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm3646F6S692 53 aa6.75□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Rnase2O35291 155 aa6.75□□□□□ -1.33
Clcn3-202ENSMUST00000056508 P01662 111 aa6.75□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm6525A0A0A6YW33 106 aa6.75□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Ear3O35290 156 aa6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 PlnP61014 52 aa6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 4930447A16RikQ9D5F6 132 aa6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 LitafQ9JLJ0 161 aa6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm9920D3YVZ2 140 aa6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Prm2P07978 107 aa6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm10762Q9CZN6 115 aa6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm5615Q3UW02 101 aa6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Fam19a4Q7TPG5 135 aa6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Trav15-2-dv6-2A0A075B650 123 aa6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 P18524 117 aa6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Rps27Q6ZWU9 84 aaKnown RBP6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Kcne3Q9WTW2 103 aa6.74□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Trav9d-1A0A075B699 112 aa6.73□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Defb19Q8K3I8 83 aa6.73□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Ccl28Q9JIL2 130 aa6.73□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Lyz1P17897 148 aa6.73□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm1968Q3T9I3 115 aa6.73□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm10549Q3URY4 149 aa6.73□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Defb12Q8K4N3 78 aa6.73□□□□□ -1.33
Clcn3-202ENSMUST00000056508 TshbP12656 138 aa6.73□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Cela2aP05208 271 aa6.73□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Fxyd3Q61835 88 aa6.73□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Igkv1-135A0A0B4J1H7 120 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm16381A0A1Y7VKT9 73 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Igkv7-33P01632 114 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 9330161L09RikQ9D253 136 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 CltcQ68FD5 1675 aaKnown RBP6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Cdk5rap2Q8K389 1822 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Ear1P97426 155 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 SpinklQ8CEK3 90 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Myh2G3UW82 1942 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Myh1Q5SX40 1942 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Unc13bQ9Z1N9 1602 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Ighv1-59A0A0A6YXE0 117 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Krtap16-1A2A5X5 502 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 SnurfQ9WU12 71 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm10160F6Y577 67 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm20708H3BKF4 155 aa6.72□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Nup153E9Q3G8 1462 aaKnown RBP6.71□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Rpl36aP83882 106 aaKnown RBP6.71□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Gm10277Q6R5C6 214 aa6.71□□□□□ -1.33
Clcn3-202ENSMUST00000056508 Trav4-2A0A075B638 110 aa6.71□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Gm20532G3UXR8 106 aa6.71□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Lama4P97927 1816 aa6.71□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Ighv5-4A0A075B5P9 117 aa6.7□□□□□ -1.34
Clcn3-202ENSMUST00000056508 4930470P17RikQ9D542 155 aa6.7□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Gm5142Q8C5X9 133 aa6.7□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Zc2hc1bQ9D534 172 aa6.7□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Q9D8Q6 235 aa6.7□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Gphb5Q812B2 130 aa6.7□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Gm14862B1AV28 81 aa6.7□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Igkv18-36A0A075B5M9 114 aa6.69□□□□□ -1.34
Clcn3-202ENSMUST00000056508 1700084M14RikB1AT01 78 aa6.69□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Shisal1Q0VBP7 198 aa6.69□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 75.8 ms