Protein–RNA interactions for Protein: Q30KM9

Defb43, Beta-defensin 43, mousemouse

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb43Q30KM9 Gm25239-201ENSMUST00000174915 86 ntBASIC34,93■■■■□ 3,18
Defb43Q30KM9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32,25■■■□□ 2,75
Defb43Q30KM9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32,12■■■□□ 2,73
Defb43Q30KM9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31,69■■■□□ 2,66
Defb43Q30KM9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31,4■■■□□ 2,62
Defb43Q30KM9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,14■■■□□ 2,58
Defb43Q30KM9 Gm15042-201ENSMUST00000120212 883 ntBASIC30,92■■■□□ 2,54
Defb43Q30KM9 Gm15045-201ENSMUST00000117359 883 ntBASIC30,32■■■□□ 2,44
Defb43Q30KM9 Gm24109-201ENSMUST00000175489 103 ntBASIC30,1■■■□□ 2,41
Defb43Q30KM9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30,08■■■□□ 2,41
Defb43Q30KM9 Psd-208ENSMUST00000224556 2034 ntBASIC29,91■■■□□ 2,38
Defb43Q30KM9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
Defb43Q30KM9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29,55■■■□□ 2,32
Defb43Q30KM9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29,49■■■□□ 2,31
Defb43Q30KM9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29,45■■■□□ 2,31
Defb43Q30KM9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,38■■■□□ 2,29
Defb43Q30KM9 Gm23366-201ENSMUST00000175022 89 ntBASIC29,21■■■□□ 2,27
Defb43Q30KM9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29,11■■■□□ 2,25
Defb43Q30KM9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29,08■■■□□ 2,25
Defb43Q30KM9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29,05■■■□□ 2,24
Defb43Q30KM9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,04■■■□□ 2,24
Defb43Q30KM9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28,98■■■□□ 2,23
Defb43Q30KM9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,93■■■□□ 2,22
Defb43Q30KM9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28,9■■■□□ 2,22
Defb43Q30KM9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28,85■■■□□ 2,21
Defb43Q30KM9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28,82■■■□□ 2,2
Defb43Q30KM9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,8■■■□□ 2,2
Defb43Q30KM9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28,78■■■□□ 2,2
Defb43Q30KM9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28,71■■■□□ 2,19
Defb43Q30KM9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28,69■■■□□ 2,18
Defb43Q30KM9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28,5■■■□□ 2,15
Defb43Q30KM9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28,45■■■□□ 2,14
Defb43Q30KM9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28,43■■■□□ 2,14
Defb43Q30KM9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28,4■■■□□ 2,14
Defb43Q30KM9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,37■■■□□ 2,13
Defb43Q30KM9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28,29■■■□□ 2,12
Defb43Q30KM9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,2■■■□□ 2,1
Defb43Q30KM9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28,1■■■□□ 2,09
Defb43Q30KM9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28,05■■■□□ 2,08
Defb43Q30KM9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27,93■■■□□ 2,06
Defb43Q30KM9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,9■■■□□ 2,06
Defb43Q30KM9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27,85■■■□□ 2,05
Defb43Q30KM9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27,73■■■□□ 2,03
Defb43Q30KM9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27,69■■■□□ 2,02
Defb43Q30KM9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27,61■■■□□ 2,01
Defb43Q30KM9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27,59■■■□□ 2,01
Defb43Q30KM9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27,55■■■□□ 2
Defb43Q30KM9 Gm10524-201ENSMUST00000181931 1893 ntBASIC27,55■■■□□ 2
Defb43Q30KM9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27,54■■■□□ 2
Defb43Q30KM9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27,53■■■□□ 2
Defb43Q30KM9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27,47■■□□□ 1,99
Defb43Q30KM9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27,47■■□□□ 1,99
Defb43Q30KM9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27,47■■□□□ 1,99
Defb43Q30KM9 Gm25238-201ENSMUST00000174914 89 ntBASIC27,46■■□□□ 1,99
Defb43Q30KM9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27,33■■□□□ 1,97
Defb43Q30KM9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27,33■■□□□ 1,97
Defb43Q30KM9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27,33■■□□□ 1,97
Defb43Q30KM9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27,33■■□□□ 1,97
Defb43Q30KM9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27,23■■□□□ 1,95
Defb43Q30KM9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27,21■■□□□ 1,95
Defb43Q30KM9 Gm27325-201ENSMUST00000175467 74 ntBASIC27,17■■□□□ 1,94
Defb43Q30KM9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27,14■■□□□ 1,94
Defb43Q30KM9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27,09■■□□□ 1,93
Defb43Q30KM9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27,09■■□□□ 1,93
Defb43Q30KM9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27,07■■□□□ 1,92
Defb43Q30KM9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27,07■■□□□ 1,92
Defb43Q30KM9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27,06■■□□□ 1,92
Defb43Q30KM9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27,04■■□□□ 1,92
Defb43Q30KM9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27,04■■□□□ 1,92
Defb43Q30KM9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27,01■■□□□ 1,91
Defb43Q30KM9 Gm42596-201ENSMUST00000196305 1958 ntBASIC26,98■■□□□ 1,91
Defb43Q30KM9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26,95■■□□□ 1,91
Defb43Q30KM9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26,9■■□□□ 1,9
Defb43Q30KM9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26,85■■□□□ 1,89
Defb43Q30KM9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26,84■■□□□ 1,89
Defb43Q30KM9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26,79■■□□□ 1,88
Defb43Q30KM9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26,76■■□□□ 1,87
Defb43Q30KM9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26,69■■□□□ 1,86
Defb43Q30KM9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26,65■■□□□ 1,86
Defb43Q30KM9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26,62■■□□□ 1,85
Defb43Q30KM9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26,62■■□□□ 1,85
Defb43Q30KM9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26,61■■□□□ 1,85
Defb43Q30KM9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Defb43Q30KM9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26,55■■□□□ 1,84
Defb43Q30KM9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26,55■■□□□ 1,84
Defb43Q30KM9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Defb43Q30KM9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Defb43Q30KM9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26,46■■□□□ 1,83
Defb43Q30KM9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Defb43Q30KM9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26,45■■□□□ 1,82
Defb43Q30KM9 Rab21-202ENSMUST00000218831 843 ntBASIC26,4■■□□□ 1,82
Defb43Q30KM9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26,39■■□□□ 1,82
Defb43Q30KM9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26,37■■□□□ 1,81
Defb43Q30KM9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Defb43Q30KM9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26,31■■□□□ 1,8
Defb43Q30KM9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26,29■■□□□ 1,8
Defb43Q30KM9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26,27■■□□□ 1,8
Defb43Q30KM9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26,27■■□□□ 1,8
Defb43Q30KM9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26,27■■□□□ 1,8
Defb43Q30KM9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26,26■■□□□ 1,79
Retrieved 100 of 76,532 protein–RNA pairs in 7,1 ms