Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Trav15-2-dv6-2A0A075B650 Gm25239-201ENSMUST00000174915 86 ntBASIC28,02■■■□□ 2,08
Trav15-2-dv6-2A0A075B650 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27,34■■□□□ 1,97
Trav15-2-dv6-2A0A075B650 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27,34■■□□□ 1,97
Trav15-2-dv6-2A0A075B650 Psd-208ENSMUST00000224556 2034 ntBASIC26,56■■□□□ 1,84
Trav15-2-dv6-2A0A075B650 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26,18■■□□□ 1,78
Trav15-2-dv6-2A0A075B650 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Trav15-2-dv6-2A0A075B650 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25,83■■□□□ 1,73
Trav15-2-dv6-2A0A075B650 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25,77■■□□□ 1,72
Trav15-2-dv6-2A0A075B650 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25,53■■□□□ 1,68
Trav15-2-dv6-2A0A075B650 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Trav15-2-dv6-2A0A075B650 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Trav15-2-dv6-2A0A075B650 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Trav15-2-dv6-2A0A075B650 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25,34■■□□□ 1,65
Trav15-2-dv6-2A0A075B650 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Trav15-2-dv6-2A0A075B650 Gm15042-201ENSMUST00000120212 883 ntBASIC25,26■■□□□ 1,63
Trav15-2-dv6-2A0A075B650 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25,17■■□□□ 1,62
Trav15-2-dv6-2A0A075B650 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,96■■□□□ 1,59
Trav15-2-dv6-2A0A075B650 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24,91■■□□□ 1,58
Trav15-2-dv6-2A0A075B650 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24,88■■□□□ 1,57
Trav15-2-dv6-2A0A075B650 Gm15045-201ENSMUST00000117359 883 ntBASIC24,84■■□□□ 1,57
Trav15-2-dv6-2A0A075B650 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,78■■□□□ 1,56
Trav15-2-dv6-2A0A075B650 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24,68■■□□□ 1,54
Trav15-2-dv6-2A0A075B650 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24,55■■□□□ 1,52
Trav15-2-dv6-2A0A075B650 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24,49■■□□□ 1,51
Trav15-2-dv6-2A0A075B650 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24,49■■□□□ 1,51
Trav15-2-dv6-2A0A075B650 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24,47■■□□□ 1,51
Trav15-2-dv6-2A0A075B650 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24,42■■□□□ 1,5
Trav15-2-dv6-2A0A075B650 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
Trav15-2-dv6-2A0A075B650 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24,38■■□□□ 1,49
Trav15-2-dv6-2A0A075B650 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24,37■■□□□ 1,49
Trav15-2-dv6-2A0A075B650 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24,33■■□□□ 1,49
Trav15-2-dv6-2A0A075B650 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24,28■■□□□ 1,48
Trav15-2-dv6-2A0A075B650 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24,24■■□□□ 1,47
Trav15-2-dv6-2A0A075B650 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24,19■■□□□ 1,46
Trav15-2-dv6-2A0A075B650 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24,17■■□□□ 1,46
Trav15-2-dv6-2A0A075B650 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24,02■■□□□ 1,44
Trav15-2-dv6-2A0A075B650 Gm10524-201ENSMUST00000181931 1893 ntBASIC24,01■■□□□ 1,43
Trav15-2-dv6-2A0A075B650 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23,96■■□□□ 1,43
Trav15-2-dv6-2A0A075B650 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23,93■■□□□ 1,42
Trav15-2-dv6-2A0A075B650 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23,92■■□□□ 1,42
Trav15-2-dv6-2A0A075B650 Gm24109-201ENSMUST00000175489 103 ntBASIC23,92■■□□□ 1,42
Trav15-2-dv6-2A0A075B650 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23,87■■□□□ 1,41
Trav15-2-dv6-2A0A075B650 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23,85■■□□□ 1,41
Trav15-2-dv6-2A0A075B650 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23,77■■□□□ 1,4
Trav15-2-dv6-2A0A075B650 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23,77■■□□□ 1,4
Trav15-2-dv6-2A0A075B650 Gm42596-201ENSMUST00000196305 1958 ntBASIC23,69■■□□□ 1,38
Trav15-2-dv6-2A0A075B650 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23,6■■□□□ 1,37
Trav15-2-dv6-2A0A075B650 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23,59■■□□□ 1,37
Trav15-2-dv6-2A0A075B650 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23,57■■□□□ 1,36
Trav15-2-dv6-2A0A075B650 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Trav15-2-dv6-2A0A075B650 Gm23366-201ENSMUST00000175022 89 ntBASIC23,5■■□□□ 1,35
Trav15-2-dv6-2A0A075B650 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23,48■■□□□ 1,35
Trav15-2-dv6-2A0A075B650 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23,48■■□□□ 1,35
Trav15-2-dv6-2A0A075B650 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23,46■■□□□ 1,35
Trav15-2-dv6-2A0A075B650 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23,45■■□□□ 1,35
Trav15-2-dv6-2A0A075B650 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23,42■■□□□ 1,34
Trav15-2-dv6-2A0A075B650 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23,38■■□□□ 1,33
Trav15-2-dv6-2A0A075B650 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23,38■■□□□ 1,33
Trav15-2-dv6-2A0A075B650 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23,34■■□□□ 1,33
Trav15-2-dv6-2A0A075B650 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23,34■■□□□ 1,33
Trav15-2-dv6-2A0A075B650 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23,3■■□□□ 1,32
Trav15-2-dv6-2A0A075B650 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23,25■■□□□ 1,31
Trav15-2-dv6-2A0A075B650 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23,25■■□□□ 1,31
Trav15-2-dv6-2A0A075B650 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23,22■■□□□ 1,31
Trav15-2-dv6-2A0A075B650 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23,2■■□□□ 1,3
Trav15-2-dv6-2A0A075B650 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23,19■■□□□ 1,3
Trav15-2-dv6-2A0A075B650 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23,18■■□□□ 1,3
Trav15-2-dv6-2A0A075B650 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23,14■■□□□ 1,29
Trav15-2-dv6-2A0A075B650 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23,13■■□□□ 1,29
Trav15-2-dv6-2A0A075B650 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23,11■■□□□ 1,29
Trav15-2-dv6-2A0A075B650 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23,09■■□□□ 1,29
Trav15-2-dv6-2A0A075B650 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Trav15-2-dv6-2A0A075B650 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23,04■■□□□ 1,28
Trav15-2-dv6-2A0A075B650 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23,01■■□□□ 1,27
Trav15-2-dv6-2A0A075B650 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22,96■■□□□ 1,27
Trav15-2-dv6-2A0A075B650 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22,94■■□□□ 1,26
Trav15-2-dv6-2A0A075B650 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22,91■■□□□ 1,26
Trav15-2-dv6-2A0A075B650 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22,83■■□□□ 1,25
Trav15-2-dv6-2A0A075B650 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22,83■■□□□ 1,24
Trav15-2-dv6-2A0A075B650 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22,82■■□□□ 1,24
Trav15-2-dv6-2A0A075B650 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22,82■■□□□ 1,24
Trav15-2-dv6-2A0A075B650 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22,78■■□□□ 1,24
Trav15-2-dv6-2A0A075B650 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22,69■■□□□ 1,22
Trav15-2-dv6-2A0A075B650 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22,67■■□□□ 1,22
Trav15-2-dv6-2A0A075B650 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22,66■■□□□ 1,22
Trav15-2-dv6-2A0A075B650 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22,63■■□□□ 1,21
Trav15-2-dv6-2A0A075B650 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22,58■■□□□ 1,21
Trav15-2-dv6-2A0A075B650 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22,58■■□□□ 1,21
Trav15-2-dv6-2A0A075B650 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22,56■■□□□ 1,2
Trav15-2-dv6-2A0A075B650 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
Trav15-2-dv6-2A0A075B650 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22,51■■□□□ 1,19
Trav15-2-dv6-2A0A075B650 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22,51■■□□□ 1,19
Trav15-2-dv6-2A0A075B650 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22,51■■□□□ 1,19
Trav15-2-dv6-2A0A075B650 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22,49■■□□□ 1,19
Trav15-2-dv6-2A0A075B650 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22,48■■□□□ 1,19
Trav15-2-dv6-2A0A075B650 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22,45■■□□□ 1,18
Trav15-2-dv6-2A0A075B650 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22,45■■□□□ 1,18
Trav15-2-dv6-2A0A075B650 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,17
Trav15-2-dv6-2A0A075B650 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22,38■■□□□ 1,17
Retrieved 100 of 76,532 protein–RNA pairs in 14,9 ms