RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Erg28Q9ERY9 140 aa11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Sdk1Q3UH53 2193 aa11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Trav14-3A0A075B607 120 aa11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Shisal2aA2A9G7 189 aa11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Gm21060J3KMU4 56 aa11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Cd24P24807 76 aa11.55□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Brwd1Q921C3 2304 aa11.55□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Olfr904Q7TRC9 310 aa11.55□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Tspo2Q9CRZ8 162 aa11.55□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Obox1Q9D350 204 aa11.55□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Col6a3E9PWQ3 3284 aa11.55□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Gm20379A0A087WR34 119 aa11.55□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Thy1P01831 162 aa11.55□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Cnn3Q9DAW9 330 aaKnown RBP11.55□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Ighv3-8A0A075B5T0 131 aa11.54□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Hspe1Q64433 102 aaKnown RBP11.54□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Igkv4-81A0A0G2JEY5 119 aa11.54□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Csn3P06796 181 aa11.54□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Olfr745Q7TRL9 328 aa11.54□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Gm29644A0A087WPG2 191 aa11.54□□□□□ -0.56
Rtf1-201ENSMUST00000028767 P04944 107 aa11.54□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Dmrtc2Q8CGW9 370 aa11.54□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Gm10188Q3V432 135 aa11.53□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Prr23a3Q9CWP9 254 aa11.53□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Q9D727 114 aa11.53□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Trav16d-dv11A0A075B617 117 aa11.53□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Edn1P22387 202 aa11.53□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Zfp248Q640N4 576 aa11.53□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Znf787Q8BIF9 381 aa11.53□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Trav14d-1A0A075B6B1 121 aa11.53□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Igkv20-101-2A0A0G2JDU3 113 aa11.53□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Usp9xP70398 2559 aaKnown RBP11.53□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Znrf2Q71FD5 238 aa11.53□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Defa3P28310 93 aa11.52□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Defa10P50708 93 aa11.52□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Defa15P50713 93 aa11.52□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Tctex1d4Q8CDY7 219 aa11.52□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Cysrt1Q9D1E4 142 aa11.52□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Card19Q9D1I2 183 aa11.52□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Tmem210Q9D2F0 147 aa11.52□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Lamtor2Q9JHS3 125 aa11.52□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Tmem141A2AJB2 108 aa11.52□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Plp1P60202 277 aa11.52□□□□□ -0.57
Rtf1-201ENSMUST00000028767 H2al2bA9Z055 111 aa11.51□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Olfr322Q5NCC8 327 aa11.51□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Htr1dQ61224 374 aa11.51□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Nbl1Q61477 178 aa11.51□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Usmg5Q78IK2 58 aa11.51□□□□□ -0.57
Rtf1-201ENSMUST00000028767 DdtO35215 118 aa11.51□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Tmem40Q4FJU9 225 aa11.51□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Spock3Q8BKV0 436 aa11.51□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Tmem97Q8VD00 176 aa11.51□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Cxcl14Q9WUQ5 99 aa11.51□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Gm33815A0A087WNV3 176 aa11.5□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Srsf9Q9D0B0 222 aaKnown RBP11.5□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Defa37K9J724 93 aa11.5□□□□□ -0.57
Rtf1-201ENSMUST00000028767 P01726 129 aa11.5□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Defa5P28312 93 aa11.5□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Zcwpw2Q08EN7 125 aa11.5□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Trav12-3A0A075B648 115 aa11.5□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Mrpl20Q9CQL4 149 aa11.5□□□□□ -0.57
Rtf1-201ENSMUST00000028767 TirapQ99JY1 241 aa11.5□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Celsr3Q91ZI0 3301 aa11.5□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Edn3P48299 214 aa11.49□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Atp5iQ06185 71 aaKnown RBP11.49□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Ang5Q5GAN1 145 aa11.49□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Ighv1-74A0A0G2JGK2 117 aa11.49□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Hoxb4P10284 250 aa11.49□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Olfr1323Q8VF35 309 aa11.49□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Olfr1199Q8VF94 310 aa11.49□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Sp5Q9JHX2 398 aa11.49□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Dusp14Q9JLY7 198 aa11.49□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Gm5468Q8C3D3 155 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Myo15bI7HPW8 3033 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Ca1P13634 261 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Mllt11P97783 90 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Srsf1Q6PDM2 248 aaKnown RBP11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 8030423J24RikQ9CX45 142 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Dpm3Q9D1Q4 92 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Ighv1-9A0A0A6YW37 117 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Esp4A8R0T8 117 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Tm4sf20Q9CQY8 226 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 HilpdaQ9JLS0 64 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Trav8-1A0A075B641 109 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 PlnP61014 52 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 TdhQ8K3F7 373 aa11.48□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Gm5294J3QP53 216 aa11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Olfr975Q8VG91 310 aa11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Ttc28Q80XJ3 2450 aa11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Trav14n-2A0A0G2JDF5 121 aa11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Isg15Q64339 161 aaKnown RBP11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Gtf2h5Q8K2X8 71 aa11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Myo9aQ8C170 2542 aa11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 E130116L18RikQ8BMV6 101 aa11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Ighv8-4A0A0A6YW26 117 aa11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 BlcapP62951 87 aa11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Gm9944Q8C559 102 aa11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Gpx7Q99LJ6 186 aa11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Bhlha15Q9QYC3 197 aa11.47□□□□□ -0.57
Rtf1-201ENSMUST00000028767 Ankhd1E9PUR0 2548 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 96.3 ms