RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Gm17359A0A0G2JEB7 487 aa9.4□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Tmem8bB1AWJ5 472 aa9.4□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Cdkn1aP39689 159 aa9.4□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Ssbp4Q3U4B1 363 aa9.4□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Trav14-2A0A075B694 121 aa9.4□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Ighv1-20A0A0A6YX66 117 aa9.4□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Sigmar1O55242 223 aa9.4□□□□□ -0.9
Rfx1-201ENSMUST00000005600 LoxP28301 411 aa9.4□□□□□ -0.9
Rfx1-201ENSMUST00000005600 ElaneQ3UP87 265 aa9.4□□□□□ -0.9
Rfx1-201ENSMUST00000005600 GlrxQ9QUH0 107 aa9.4□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Tmem95P0DJF3 176 aa9.4□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Sptan1P16546 2472 aaKnown RBP9.4□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Ccl6P27784 116 aa9.4□□□□□ -0.91
Rfx1-201ENSMUST00000005600 NpbQ8K4P1 119 aa9.4□□□□□ -0.91
Rfx1-201ENSMUST00000005600 CntfrO88507 372 aa9.39□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Cd24P24807 76 aa9.39□□□□□ -0.91
Rfx1-201ENSMUST00000005600 P01756 117 aa9.39□□□□□ -0.91
Rfx1-201ENSMUST00000005600 P01757 117 aa9.39□□□□□ -0.91
Rfx1-201ENSMUST00000005600 OtorQ9JIE3 128 aa9.39□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gpx1P11352 201 aa9.39□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Aqp6Q8C4A0 293 aa9.39□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Q9D131 166 aa9.39□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Map1aQ9QYR6 2776 aa9.39□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Sap30O88574 220 aa9.38□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Vps13cQ8BX70 3748 aa9.38□□□□□ -0.91
Rfx1-201ENSMUST00000005600 P01748 117 aa9.38□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gm5105Q8C6Y9 112 aa9.38□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Olfr498Q8VEW2 330 aa9.38□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Trav16d-dv11A0A075B617 117 aa9.38□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Znf239P24399 201 aa9.38□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Slc25a16Q8C0K5 332 aa9.38□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Svs5P30933 122 aa9.38□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Mrps21P58059 87 aa9.38□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Rbfox3Q8BIF2 374 aa9.38□□□□□ -0.91
Rfx1-201ENSMUST00000005600 TctaQ8VEA7 122 aa9.38□□□□□ -0.91
Rfx1-201ENSMUST00000005600 AcanQ61282 2132 aaKnown RBP9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Igsf23B2RTN2 239 aa9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Abca4O35600 2310 aa9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Trav7-5A0A0G2JFX6 112 aa9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gm10036E9PYL9 178 aaKnown RBP9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gp9O88186 177 aa9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Defa-rs2P17534 91 aa9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 9130230L23RikQ8CC80 163 aa9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gtsf1lQ9CWD0 151 aa9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Rif1Q6PR54 2419 aaKnown RBP9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Ighv1-31A0A0A6YWK5 117 aa9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Esp3J3QN49 87 aa9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gm26602M0QWA4 95 aa9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 CklfQ9DAS1 152 aa9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Nit2Q9JHW2 276 aa9.37□□□□□ -0.91
Rfx1-201ENSMUST00000005600 KalrnA2CG49 2964 aa9.36□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Ncor2Q9WU42 2472 aaKnown RBP9.36□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gm12888Q3UW77 119 aa9.36□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Atxn7l1Q9CZ05 146 aa9.36□□□□□ -0.91
Rfx1-201ENSMUST00000005600 SvipQ3UZP4 77 aa9.36□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Ptprz1B9EKR1 2312 aa9.36□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Olfr322Q5NCC8 327 aa9.36□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Olfr317Q5NCD6 327 aa9.36□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Spink6Q8BT20 105 aa9.36□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Wisp2Q9Z0G4 251 aa9.36□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gm29289A0A087WPY7 166 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gm4064A0A087WR82 380 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 H2al2bA9Z055 111 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gm10352B2RWR6 380 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gm21693J3QK27 380 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Rbmy1a1O35698 380 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 NdpP48744 131 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 ManfQ9CXI5 179 aaKnown RBP9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Sec16aA2AIX1 2377 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 A730046J19RikA0A1B0GSN8 89 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Vsig4F6TUL9 280 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Prok1Q14A28 105 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 7420426K07RikQ3UX66 186 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Obp2aQ8K1H9 176 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Rnf185Q91YT2 192 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Dusp14Q9JLY7 198 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Trav19A0A0B4J1K4 119 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Cox11Q6P8I6 275 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Spock3Q8BKV0 436 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Dmxl2Q8BPN8 3032 aa9.35□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gm2174F6ZVF2 133 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Atp6v0bQ91V37 205 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Cks1brtQ3UNC9 96 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Spata46Q4FZF2 204 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Hspe1Q64433 102 aaKnown RBP9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Snrnp40Q6PE01 358 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Hif1anQ8BLR9 349 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Shisa9Q9CZN4 424 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Trav21-dv12A0A075B6C4 109 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gm28038F7BCN9 126 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Defa37K9J724 93 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Defa5P28312 93 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Cks1bP61025 79 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 TcraP01849 138 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Lynx1P0DP60 116 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Fxyd7P59648 80 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Olfr1209Q3SXJ3 310 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Gm4763Q8CFJ5 196 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Tmem210Q9D2F0 147 aa9.34□□□□□ -0.91
Rfx1-201ENSMUST00000005600 Hrct1Q9D6B9 109 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms