RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 Igkv3-9A0A140T8P4 119 aa13.95□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Wt1P22561 449 aa13.95□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Tdgf1P51865 171 aa13.95□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Cela2aP05208 271 aa13.95□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Myod1P10085 318 aa13.95□□□□□ -0.18
Shroom3-211ENSMUST00000225438 PolP10400 120 aa13.95□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Ighv1-55A0A075B5W6 117 aa13.95□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Gm12253Q5NC48 229 aa13.95□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Dpm3Q9D1Q4 92 aa13.95□□□□□ -0.18
Shroom3-211ENSMUST00000225438 CckP09240 115 aa13.94□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Fam110dQ80X91 271 aa13.94□□□□□ -0.18
Shroom3-211ENSMUST00000225438 NmbQ9CR53 121 aa13.94□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Gm15080A2BI02 449 aa13.94□□□□□ -0.18
Shroom3-211ENSMUST00000225438 SprnQ8BWU1 147 aa13.94□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Rnf183Q8QZS5 190 aa13.94□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Ccl17F6R5P4 103 aa13.94□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Znrd1Q791N7 123 aa13.94□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Bcl6bO88282 474 aa13.94□□□□□ -0.18
Shroom3-211ENSMUST00000225438 P0C1Z5 52 aa13.94□□□□□ -0.18
Shroom3-211ENSMUST00000225438 BC049762Q8C601 163 aa13.94□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Cacna1gQ5SUF7 2381 aa13.94□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Dad1P61804 113 aa13.93□□□□□ -0.18
Shroom3-211ENSMUST00000225438 SeboxP70368 190 aa13.93□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Mapk1ip1lQ8BH93 242 aa13.93□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Gm9513B3GLJ6 99 aa13.93□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Sbf2E9PXF8 1872 aa13.93□□□□□ -0.18
Shroom3-211ENSMUST00000225438 TdhQ8K3F7 373 aa13.93□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Wfdc11A2A5H7 82 aa13.93□□□□□ -0.18
Shroom3-211ENSMUST00000225438 P01787 123 aa13.93□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Edn1P22387 202 aa13.93□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Cacna1eQ61290 2272 aa13.93□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Trbv3A0A0A6YYE2 117 aa13.93□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Igkv4-53A0A0G2JFC6 119 aa13.93□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Ca5aP23589 299 aa13.92□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Gm16686Q3UMN9 131 aa13.92□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Ncor2Q9WU42 2472 aaKnown RBP13.92□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Polr3kQ9CQZ7 108 aa13.92□□□□□ -0.18
Shroom3-211ENSMUST00000225438 OtofQ9ESF1 1997 aa13.92□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Nup214Q80U93 2085 aa13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Rpl32P62911 135 aaKnown RBP13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Pfn1P62962 140 aa13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Lmo1Q924W9 156 aa13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Gm33815A0A087WNV3 176 aa13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Gm27027S4R1M6 97 aa13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Med12lQ8BQM9 2157 aa13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Armcx4E9PWM3 2356 aa13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Gm28269A0A087WSG3 125 aa13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Igkv4-59A0A0B4J1I8 117 aa13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Igkv8-34A0A0G2JDU0 121 aa13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 P01680 129 aa13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 MdfiP70331 251 aa13.91□□□□□ -0.18
Shroom3-211ENSMUST00000225438 SpinklQ8CEK3 90 aa13.9□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Ahctf1Q8CJF7 2243 aaKnown RBP13.9□□□□□ -0.18
Shroom3-211ENSMUST00000225438 H2al1nQ497L1 109 aa13.9□□□□□ -0.18
Shroom3-211ENSMUST00000225438 VsirQ9D659 308 aa13.9□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Sbf1Q6ZPE2 1867 aa13.9□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Mcm3apQ9WUU9 1971 aa13.9□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Foxi3E0CZH3 425 aa13.9□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Minos1Q7TNS2 76 aa13.9□□□□□ -0.18
Shroom3-211ENSMUST00000225438 COA4Q8BT51 87 aa13.9□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Vopp1Q8R1C3 172 aa13.9□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Timm10bQ9WV96 100 aa13.9□□□□□ -0.18
Shroom3-211ENSMUST00000225438 Igkv4-61A0A0G2JH00 117 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 LeprotO89013 131 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 P01786 117 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Lrrk1Q3UHC2 2014 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Ighv1-58A0A075B5W9 117 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Fhl4Q8CDC8 279 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Supt4h1bQ9Z199 117 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Trav14d-3-dv8A0A075B619 120 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 P01790 122 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Qrich2A0A140LIY9 2337 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Ighv5-8A0A075B676 92 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 E130218I03RikA0A0U1RNU5 63 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Gm10188Q3V432 135 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Tpsg1Q9QUL7 311 aa13.89□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Fam208bQ5DTT3 2382 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Prok1Q14A28 105 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Rnf144bQ8BKD6 301 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Msrb3Q8BU85 253 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Atp6v0bQ91V37 205 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Hist2h2beQ64524 126 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Gbf1Q6DFZ1 1861 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Fgf4P11403 202 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Isg15Q64339 161 aaKnown RBP13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Mogat1Q91ZV4 335 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Gm19410A0A140LJC7 2098 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Smim10l1A0A087WNQ7 89 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Brd3osA0A1B0GRB6 84 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Nr2c2apQ3TV70 140 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 BC048502Q80Y74 154 aa13.88□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Gm815Q3UWS2 115 aa13.87□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Chchd5Q9CQP3 110 aa13.87□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Ighv8-4A0A0A6YW26 117 aa13.87□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Reg3dQ9QUS9 175 aa13.87□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Igkv4-63A0A0G2JFU6 117 aa13.87□□□□□ -0.19
Shroom3-211ENSMUST00000225438 P18528 98 aa13.87□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Gm10881P01642 115 aa13.87□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Hoxd3P09027 433 aa13.87□□□□□ -0.19
Shroom3-211ENSMUST00000225438 Med13Q5SWW4 2171 aa13.87□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 57.6 ms