RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Pip4p1Q3TWL2 284 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Obox7Q4KL20 218 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Trdv2-2Q5R1A4 116 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Vmn1r195Q5SVD6 316 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 BC048562Q80ZQ7 204 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Sox21Q811W0 276 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 9130230L23RikQ8CC80 163 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Olfr1336Q8VGH5 314 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Hyls1Q9CXX0 307 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Josd1Q9DBJ6 202 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 IcosQ9WVS0 200 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Ighv1-81A0A075B5Y4 117 aa5.65□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Gm2174F6ZVF2 133 aa5.65□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Gm3512L7N206 146 aa5.65□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Saa4P31532 130 aa5.65□□□□□ -1.51
Clrn1-202ENSMUST00000055636 F2rl1P55086 399 aa5.65□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Ripply2Q2WG76 128 aa5.65□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Gm9949Q8C9F4 104 aa5.65□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Lelp1Q9DAE3 120 aa5.65□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Them7Q9DCP4 223 aa5.65□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Dazap1Q9JII5 406 aaKnown RBP5.65□□□□□ -1.51
Clrn1-202ENSMUST00000055636 CompQ9R0G6 755 aa5.65□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Ighv6-7A0A0A6YWU3 119 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Olfr364-ps1A0A140T8Q2 307 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Dlx6P70397 175 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Olfr322Q5NCC8 327 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Shisa2Q8QZV2 295 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Lyzl1Q9CPX3 148 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Rab1bQ9D1G1 201 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Ammecr1Q9JHT5 344 aaKnown RBP5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Celsr2Q9R0M0 2920 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Ighv9-4A0A0A6YWH6 117 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Trav7-1A0A0G2JEV5 112 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 TfpiO54819 306 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Thy1P01831 162 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Ighv3-6P18531 116 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Pgpep1lQ9CWB5 130 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Malsu1Q9CWV0 228 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Rnase4Q9JJH1 148 aa5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 TrrapQ80YV3 2565 aaKnown RBP5.64□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Mtatp8P03930 67 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Cd69P37217 199 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Defa9P50707 93 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Slamf7Q8BHK6 333 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Slc16a4Q8R0M8 500 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Srd5a2Q99N99 254 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Zfp119aQ9JIC0 545 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Gm15294V9GXA7 121 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Gm45623A0A1B0GSF6 103 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 CntfrO88507 372 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 P01791 123 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 P04943 107 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Gata4Q08369 441 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Ppp1r3cQ7TMB3 317 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Olfr745Q7TRL9 328 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Snx22Q8C084 192 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 PgpQ8CHP8 321 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Zg16Q8K0C5 167 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Trpt1Q8K3A2 249 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Trappc2lQ9JME7 139 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Hivep2Q3UHF7 2430 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Ighv7-3A0A075B5R2 120 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Saa3P04918 122 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Gm26566Q8CAC1 153 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Vmn1r197Q8R265 298 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Olfr824Q8VFU4 315 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Tmem189Q99LQ7 271 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Ociad1Q9CRD0 247 aaKnown RBP5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Sec11aQ9R0P6 179 aa5.63□□□□□ -1.51
Clrn1-202ENSMUST00000055636 OtogO55225 2910 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Ighv1-37A0A0A6YW32 117 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Gm9970F6ZED4 185 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Vmn1r60G3UY47 300 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Casp6O08738 276 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Lynx1P0DP60 116 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Mfge8P21956 463 aaKnown RBP5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Tmem97Q8VD00 176 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Rchy1Q9CR50 261 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Lyg1Q9D7Q0 197 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 AcanQ61282 2132 aaKnown RBP5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Ighv1-31A0A0A6YWK5 117 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Vma21-psA0A140T8R2 101 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Gm5426J3QNM7 103 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Gm26965M0QWH4 86 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Cacng7P62956 275 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 V1rd19Q3KNP5 305 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 BB014433Q8C5R5 389 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Stxbp6Q8R3T5 210 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Prss41Q920S2 322 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Chchd5Q9CQP3 110 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Nat6Q9R123 314 aa5.62□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Gm28778A0A087WSK7 233 aa5.61□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Igsf23B2RTN2 239 aa5.61□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Defa13P50711 93 aa5.61□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Fabp6P51162 128 aa5.61□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Defa26Q3L180 93 aa5.61□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Insig2Q91WG1 225 aa5.61□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Chac2Q9CQG1 178 aa5.61□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Necap2Q9D1J1 266 aa5.61□□□□□ -1.51
Clrn1-202ENSMUST00000055636 Wfdc2Q9DAU7 174 aa5.61□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 109.3 ms