Protein–RNA interactions for Protein: Q8K3A2

Trpt1, tRNA 2'-phosphotransferase 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpt1Q8K3A2 Gm25239-201ENSMUST00000174915 86 ntBASIC27,15■■□□□ 1,94
Trpt1Q8K3A2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26,09■■□□□ 1,77
Trpt1Q8K3A2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Trpt1Q8K3A2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25,18■■□□□ 1,62
Trpt1Q8K3A2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24,87■■□□□ 1,57
Trpt1Q8K3A2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Trpt1Q8K3A2 Psd-208ENSMUST00000224556 2034 ntBASIC24,32■■□□□ 1,48
Trpt1Q8K3A2 Gm15042-201ENSMUST00000120212 883 ntBASIC24,2■■□□□ 1,46
Trpt1Q8K3A2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24,13■■□□□ 1,45
Trpt1Q8K3A2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1,43
Trpt1Q8K3A2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23,79■■□□□ 1,4
Trpt1Q8K3A2 Gm15045-201ENSMUST00000117359 883 ntBASIC23,74■■□□□ 1,39
Trpt1Q8K3A2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Trpt1Q8K3A2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23,47■■□□□ 1,35
Trpt1Q8K3A2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23,44■■□□□ 1,34
Trpt1Q8K3A2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,4■■□□□ 1,34
Trpt1Q8K3A2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23,34■■□□□ 1,33
Trpt1Q8K3A2 Gm24109-201ENSMUST00000175489 103 ntBASIC23,32■■□□□ 1,32
Trpt1Q8K3A2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,27■■□□□ 1,31
Trpt1Q8K3A2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23,24■■□□□ 1,31
Trpt1Q8K3A2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23,11■■□□□ 1,29
Trpt1Q8K3A2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,92■■□□□ 1,26
Trpt1Q8K3A2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22,91■■□□□ 1,26
Trpt1Q8K3A2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22,91■■□□□ 1,26
Trpt1Q8K3A2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22,89■■□□□ 1,26
Trpt1Q8K3A2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22,88■■□□□ 1,25
Trpt1Q8K3A2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22,84■■□□□ 1,25
Trpt1Q8K3A2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22,81■■□□□ 1,24
Trpt1Q8K3A2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22,8■■□□□ 1,24
Trpt1Q8K3A2 Gm23366-201ENSMUST00000175022 89 ntBASIC22,74■■□□□ 1,23
Trpt1Q8K3A2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22,73■■□□□ 1,23
Trpt1Q8K3A2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Trpt1Q8K3A2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22,64■■□□□ 1,22
Trpt1Q8K3A2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22,62■■□□□ 1,21
Trpt1Q8K3A2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,6■■□□□ 1,21
Trpt1Q8K3A2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,59■■□□□ 1,21
Trpt1Q8K3A2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22,59■■□□□ 1,21
Trpt1Q8K3A2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22,52■■□□□ 1,2
Trpt1Q8K3A2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22,5■■□□□ 1,19
Trpt1Q8K3A2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22,41■■□□□ 1,18
Trpt1Q8K3A2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22,34■■□□□ 1,17
Trpt1Q8K3A2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22,33■■□□□ 1,16
Trpt1Q8K3A2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22,3■■□□□ 1,16
Trpt1Q8K3A2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22,23■■□□□ 1,15
Trpt1Q8K3A2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22,23■■□□□ 1,15
Trpt1Q8K3A2 Gm10524-201ENSMUST00000181931 1893 ntBASIC22,21■■□□□ 1,15
Trpt1Q8K3A2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22,2■■□□□ 1,14
Trpt1Q8K3A2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22,14■■□□□ 1,14
Trpt1Q8K3A2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22,14■■□□□ 1,14
Trpt1Q8K3A2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22,06■■□□□ 1,12
Trpt1Q8K3A2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21,91■■□□□ 1,1
Trpt1Q8K3A2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21,88■■□□□ 1,09
Trpt1Q8K3A2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21,87■■□□□ 1,09
Trpt1Q8K3A2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21,83■■□□□ 1,09
Trpt1Q8K3A2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21,74■■□□□ 1,07
Trpt1Q8K3A2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21,73■■□□□ 1,07
Trpt1Q8K3A2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21,71■■□□□ 1,07
Trpt1Q8K3A2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21,7■■□□□ 1,06
Trpt1Q8K3A2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21,67■■□□□ 1,06
Trpt1Q8K3A2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21,66■■□□□ 1,06
Trpt1Q8K3A2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21,62■■□□□ 1,05
Trpt1Q8K3A2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21,6■■□□□ 1,05
Trpt1Q8K3A2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Trpt1Q8K3A2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21,57■■□□□ 1,04
Trpt1Q8K3A2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21,56■■□□□ 1,04
Trpt1Q8K3A2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21,56■■□□□ 1,04
Trpt1Q8K3A2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21,53■■□□□ 1,04
Trpt1Q8K3A2 Gm42596-201ENSMUST00000196305 1958 ntBASIC21,52■■□□□ 1,04
Trpt1Q8K3A2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Trpt1Q8K3A2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21,48■■□□□ 1,03
Trpt1Q8K3A2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21,47■■□□□ 1,03
Trpt1Q8K3A2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21,46■■□□□ 1,03
Trpt1Q8K3A2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Trpt1Q8K3A2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Trpt1Q8K3A2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21,43■■□□□ 1,02
Trpt1Q8K3A2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21,41■■□□□ 1,02
Trpt1Q8K3A2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21,41■■□□□ 1,02
Trpt1Q8K3A2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21,4■■□□□ 1,02
Trpt1Q8K3A2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21,38■■□□□ 1,01
Trpt1Q8K3A2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21,34■■□□□ 1,01
Trpt1Q8K3A2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Trpt1Q8K3A2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Trpt1Q8K3A2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21,29■■□□□ 1
Trpt1Q8K3A2 Gm27325-201ENSMUST00000175467 74 ntBASIC21,29■■□□□ 1
Trpt1Q8K3A2 Gm25238-201ENSMUST00000174914 89 ntBASIC21,27■■□□□ 1
Trpt1Q8K3A2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Trpt1Q8K3A2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21,24■□□□□ 0,99
Trpt1Q8K3A2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21,2■□□□□ 0,98
Trpt1Q8K3A2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21,16■□□□□ 0,98
Trpt1Q8K3A2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Trpt1Q8K3A2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21,1■□□□□ 0,97
Trpt1Q8K3A2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21,09■□□□□ 0,97
Trpt1Q8K3A2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21,08■□□□□ 0,97
Trpt1Q8K3A2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21,07■□□□□ 0,96
Trpt1Q8K3A2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21,06■□□□□ 0,96
Trpt1Q8K3A2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21,01■□□□□ 0,95
Trpt1Q8K3A2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0,95
Trpt1Q8K3A2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20,99■□□□□ 0,95
Trpt1Q8K3A2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20,98■□□□□ 0,95
Trpt1Q8K3A2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20,97■□□□□ 0,95
Retrieved 100 of 76,532 protein–RNA pairs in 11,4 ms