RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Tcl1b4P56844 120 aa12.35□□□□□ -0.43
Chd3-201ENSMUST00000092971 Csrp2P97314 193 aaKnown RBP12.35□□□□□ -0.43
Chd3-201ENSMUST00000092971 Runx1Q03347 451 aa12.35□□□□□ -0.43
Chd3-201ENSMUST00000092971 Igkv8-16A0A0G2JDG9 121 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 A0A1Y7VLU2 103 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 Sod1P08228 154 aaKnown RBP12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 Prok1Q14A28 105 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 Ang6Q5GAN0 147 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 Kif26bQ7TNC6 2112 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 Gm20219A0A1B0GRQ3 87 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 Trav6d-3A0A075B6B3 112 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 Trav7-1A0A0G2JEV5 112 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 Trav6-3Q5R1E6 112 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 Igkv4-57A0A0A6YYE7 117 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 Gm16381A0A1Y7VKT9 73 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 Spink10Q8CAC8 162 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 PifoQ9D9W1 207 aa12.34□□□□□ -0.43
Chd3-201ENSMUST00000092971 Igkv4-74A0A0B4J1I3 119 aa12.33□□□□□ -0.43
Chd3-201ENSMUST00000092971 Igkv20-101-2A0A0G2JDU3 113 aa12.33□□□□□ -0.43
Chd3-201ENSMUST00000092971 Pax9P47242 342 aa12.33□□□□□ -0.43
Chd3-201ENSMUST00000092971 SlpiP97430 131 aa12.33□□□□□ -0.43
Chd3-201ENSMUST00000092971 2210407C18RikQ6YI28 220 aa12.33□□□□□ -0.43
Chd3-201ENSMUST00000092971 Lamb2Q61292 1799 aa12.33□□□□□ -0.44
Chd3-201ENSMUST00000092971 Dock2Q8C3J5 1828 aa12.33□□□□□ -0.44
Chd3-201ENSMUST00000092971 Gm20517G3UVU6 152 aa12.33□□□□□ -0.44
Chd3-201ENSMUST00000092971 Supt4h1aP63271 117 aa12.33□□□□□ -0.44
Chd3-201ENSMUST00000092971 Usmg5Q78IK2 58 aa12.33□□□□□ -0.44
Chd3-201ENSMUST00000092971 Igkv6-13A0A0G2JGY3 119 aa12.32□□□□□ -0.44
Chd3-201ENSMUST00000092971 Prdm6Q3UZD5 596 aa12.32□□□□□ -0.44
Chd3-201ENSMUST00000092971 Tcrg-C1A0A075B5Z0 172 aa12.32□□□□□ -0.44
Chd3-201ENSMUST00000092971 Gm11110Q3U4K9 109 aa12.32□□□□□ -0.44
Chd3-201ENSMUST00000092971 Igkv6-32A0A140T8N9 115 aa12.32□□□□□ -0.44
Chd3-201ENSMUST00000092971 C1qtnf5Q8K479 243 aa12.32□□□□□ -0.44
Chd3-201ENSMUST00000092971 Ighv1-80A0A075B5Y3 117 aa12.32□□□□□ -0.44
Chd3-201ENSMUST00000092971 Carhsp1Q9CR86 148 aa12.32□□□□□ -0.44
Chd3-201ENSMUST00000092971 Ifi27l2aQ8R412 90 aa12.32□□□□□ -0.44
Chd3-201ENSMUST00000092971 PmvkQ9D1G2 192 aa12.32□□□□□ -0.44
Chd3-201ENSMUST00000092971 Zfp951A0A087WRH0 451 aa12.31□□□□□ -0.44
Chd3-201ENSMUST00000092971 Ighv1-31A0A0A6YWK5 117 aa12.31□□□□□ -0.44
Chd3-201ENSMUST00000092971 LeprotO89013 131 aa12.31□□□□□ -0.44
Chd3-201ENSMUST00000092971 Folr2Q05685 251 aa12.31□□□□□ -0.44
Chd3-201ENSMUST00000092971 Tmem171Q4KL18 322 aa12.31□□□□□ -0.44
Chd3-201ENSMUST00000092971 Fbln5Q9WVH9 448 aa12.31□□□□□ -0.44
Chd3-201ENSMUST00000092971 Col18a1P39061 1774 aa12.31□□□□□ -0.44
Chd3-201ENSMUST00000092971 Prh1P05142 261 aa12.31□□□□□ -0.44
Chd3-201ENSMUST00000092971 Gm10604Q3V0X7 143 aa12.31□□□□□ -0.44
Chd3-201ENSMUST00000092971 Ube2wQ8VDW4 151 aa12.31□□□□□ -0.44
Chd3-201ENSMUST00000092971 Atp23Q9CWQ3 201 aa12.31□□□□□ -0.44
Chd3-201ENSMUST00000092971 Tcf24V9GWT9 166 aa12.31□□□□□ -0.44
Chd3-201ENSMUST00000092971 PhipQ8VDD9 1821 aaKnown RBP12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Fam208bQ5DTT3 2382 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Igkv4-80A0A075B5L7 116 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 KprpB2RUR4 657 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Gata1P17679 413 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Alpk2Q91ZB0 2144 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Gm19410A0A140LJC7 2098 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Trbv12-2A0A0B4J1H1 124 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Socs3O35718 225 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Ca1P13634 261 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 OtofQ9ESF1 1997 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Ighv14-1A0A075B5R4 117 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 GhrhP16043 103 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Smim26Q3V460 107 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Trdv4Q5R1A3 115 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Stpg1Q9D2F5 341 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Nit2Q9JHW2 276 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Ralgapa1Q6GYP7 2035 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Bdp1Q571C7 2467 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Foxf2O54743 446 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 P01790 122 aa12.3□□□□□ -0.44
Chd3-201ENSMUST00000092971 Lrrk1Q3UHC2 2014 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Iglc2P01844 104 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 CrygbP04344 175 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Rpl32-psP17932 135 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Psme4Q5SSW2 1843 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Marf1Q8BJ34 1730 aaKnown RBP12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Pear1Q8VIK5 1034 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Q8R092 253 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Pnrc2Q9CR73 140 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Atad5Q4QY64 1826 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Asxl3Q8C4A5 2259 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Trpm7Q923J1 1863 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 4930546C10RikE9Q4Y3 121 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Gm20878L7N244 103 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Gm7489Q3UT34 171 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Lime1Q9EQR5 269 aa12.29□□□□□ -0.44
Chd3-201ENSMUST00000092971 Med12A2AGH6 2190 aa12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 Scn9aQ62205 1984 aa12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 Ubr3Q5U430 1889 aa12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 Cmc4Q61908 68 aa12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 Timm21Q8CCM6 249 aa12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 Dpm2Q9Z324 84 aa12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 SisF8VQM5 1818 aa12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 Klrd1O54707 179 aa12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 P18533 117 aa12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 Pgpep1lQ9CWB5 130 aa12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 Polr2aP08775 1970 aaKnown RBP12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 Hbb-bsA8DUK4 147 aa12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 Hbb-b1P02088 147 aa12.28□□□□□ -0.44
Chd3-201ENSMUST00000092971 Mtatp8P03930 67 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms