RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Ighv1-49A0A0A6YWX2 117 aa14.75□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Gm4744D3Z3S5 154 aa14.75□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Saa3P04918 122 aa14.75□□□□□ -0.05
Scaf11-201ENSMUST00000047835 PigyP0C1P0 71 aa14.75□□□□□ -0.05
Scaf11-201ENSMUST00000047835 LoxP28301 411 aa14.75□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Igkv19-93A0A0G2JFZ3 115 aa14.74□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Tcl1b2P56841 117 aa14.74□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Gm10447Q3UQ92 135 aa14.74□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Ssbp2Q9CYZ8 361 aa14.74□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Trdv2-1A0A0G2JGB9 116 aa14.74□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Gm7489Q3UT34 171 aa14.74□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Dennd4aE9Q8V6 1869 aa14.74□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Ighv1-16A0A075B5U1 98 aa14.73□□□□□ -0.05
Scaf11-201ENSMUST00000047835 NmbQ9CR53 121 aa14.73□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Psmg3Q9CZH3 122 aa14.73□□□□□ -0.05
Scaf11-201ENSMUST00000047835 LenepQ9WVB6 61 aa14.73□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Gdf15Q9Z0J7 303 aa14.73□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Nlrc5C3VPR6 1915 aa14.73□□□□□ -0.05
Scaf11-201ENSMUST00000047835 PlnP61014 52 aa14.73□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Dock7Q8R1A4 2130 aaKnown RBP14.73□□□□□ -0.05
Scaf11-201ENSMUST00000047835 TtrP07309 147 aa14.73□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Gm6040Q4QY32 63 aa14.73□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Lyzl1Q9CPX3 148 aa14.73□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Pradc1Q9D9N8 188 aa14.73□□□□□ -0.05
Scaf11-201ENSMUST00000047835 P01792 123 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Rpp25lQ99JH1 163 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 ApomQ9Z1R3 190 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 P01736 120 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 NrgnP60761 78 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Mzt1Q8BUR9 78 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Cdk2ap2Q9CPY4 127 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Foxf1Q61080 378 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Ighv1-9A0A0A6YW37 117 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Pex7P97865 318 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Gm10842Q3U587 122 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Olfr1402Q8VET1 320 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Pth2Q91W27 100 aa14.72□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Ighv8-6A0A0A6YXA3 118 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Lgals6O54891 301 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 MsmpB1AWI6 139 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 AponG3X9D6 251 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Megf10Q6DIB5 1147 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Gtsf1lQ9CWD0 151 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Inafm1E9PV59 130 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Minos1Q7TNS2 76 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Ifi27l2aQ8R412 90 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Anapc1P53995 1944 aaKnown RBP14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Nat8b-psE0CYC6 232 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Atp5iQ06185 71 aaKnown RBP14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Gm1553Q66VB7 94 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 LitafQ9JLJ0 161 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Klk4Q9Z0M1 255 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Myo9bQ9QY06 2114 aa14.71□□□□□ -0.05
Scaf11-201ENSMUST00000047835 Plxnb1Q8CJH3 2119 aa14.71□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Esp24A8R0V6 68 aa14.71□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Lypd1Q8BLC3 141 aa14.71□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Tusc5Q8C838 173 aa14.71□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Olfr498Q8VEW2 330 aa14.7□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Cox6cQ9CPQ1 76 aa14.7□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Olfr745Q7TRL9 328 aa14.7□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Clec5aQ9R007 190 aa14.7□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Ighv8-4A0A0A6YW26 117 aa14.7□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Tm4sf19E9Q9H8 206 aa14.7□□□□□ -0.06
Scaf11-201ENSMUST00000047835 BC049762Q8C601 163 aa14.7□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Q9D8L0 127 aa14.7□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Lsm4Q9QXA5 137 aaKnown RBP14.7□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Gm9513B3GLJ6 99 aa14.69□□□□□ -0.06
Scaf11-201ENSMUST00000047835 1700020N15RikL7MTX3 112 aa14.69□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Zfp248Q640N4 576 aa14.69□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Mrpl32Q9DCI9 187 aaKnown RBP14.69□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Trip12G5E870 2025 aaKnown RBP14.69□□□□□ -0.06
Scaf11-201ENSMUST00000047835 MgamB5THE2 1827 aa14.69□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Igkv4-70A0A0B4J1I5 116 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Hist1h2bfP10853 126 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Hist1h2bbQ64475 126 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Hist1h2bkQ8CGP1 126 aaKnown RBP14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Hist1h2bpQ8CGP2 126 aaKnown RBP14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Plpp2Q9DAX2 276 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Gm20458E9PXJ7 78 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Ighv1-39A0A075B5V5 117 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Igkv4-71A0A0G2JEH0 117 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 P03980 138 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Igkv1-99F6XWB2 120 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Lcn2P11672 200 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Defa4P28311 92 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Higd1aQ9JLR9 95 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Gm11020F6ZGD5 61 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 P01789 122 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Trav3-3Q5R1C3 114 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Zc2hc1aQ8BJH1 324 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Snx22Q8C084 192 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 PerpQ9JK95 193 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Tomm40Q9QYA2 361 aa14.68□□□□□ -0.06
Scaf11-201ENSMUST00000047835 MyofQ69ZN7 2048 aaKnown RBP14.67□□□□□ -0.06
Scaf11-201ENSMUST00000047835 D130052B06RikQ3UW13 202 aa14.67□□□□□ -0.06
Scaf11-201ENSMUST00000047835 GgctQ9D7X8 188 aa14.67□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Jmjd1cQ69ZK6 2350 aa14.67□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Dph3Q8K0W9 82 aa14.67□□□□□ -0.06
Scaf11-201ENSMUST00000047835 Sec16aA2AIX1 2377 aa14.67□□□□□ -0.06
Scaf11-201ENSMUST00000047835 F11rO88792 300 aa14.67□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 267.4 ms