RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Brd3osA0A1B0GRB6 84 aa13.65□□□□□ -0.22
Col17a1-201ENSMUST00000026045 NpsP0C0P8 89 aa13.65□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Trav6d-4Q5R1I0 115 aa13.65□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Cysltr1Q99JA4 352 aa13.65□□□□□ -0.22
Col17a1-201ENSMUST00000026045 D930048N14RikA2AA67 225 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 P01801 115 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Cox7cP17665 63 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 AgerQ62151 402 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Mrpl16Q99N93 251 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Tex36Q9D5N9 219 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Dock4P59764 1978 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Trav6d-3A0A075B6B3 112 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Reg1P43137 165 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Gm7489Q3UT34 171 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Trav6-3Q5R1E6 112 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Pmaip1Q9JM54 103 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Gm17677B3GLJ5 116 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Zfp36P22893 319 aaKnown RBP13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 HrkP62816 92 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Timm23Q9WTQ8 209 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Tcf24V9GWT9 166 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Dkk1O54908 272 aa13.64□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Vwa8Q8CC88 1905 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Siglec15A7E1W8 342 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 A930003A15RikQ3U552 87 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Zic4Q61467 341 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 GrhprQ91Z53 328 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Dynlrb2Q9DAJ5 96 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Plekhb2Q9QZC7 221 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 CrebbpP45481 2441 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Trdv1A0A075B657 112 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Trav12d-3A0A075B6A4 115 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Mllt11P97783 90 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Mettl26Q9DCS2 204 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Tomm6Q9CQN3 74 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Ighv1-76A0A0G2JFE9 117 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Rnf138Q9CQE0 245 aaKnown RBP13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 GlrxQ9QUH0 107 aa13.63□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Gm5294J3QP53 216 aa13.62□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Slc25a48Q8BW66 306 aa13.62□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Rpp25lQ99JH1 163 aa13.62□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Tcl1b2P56841 117 aa13.62□□□□□ -0.23
Col17a1-201ENSMUST00000026045 SvipQ3UZP4 77 aa13.62□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Gm26602M0QWA4 95 aa13.62□□□□□ -0.23
Col17a1-201ENSMUST00000026045 RlfA2A7F4 1918 aa13.61□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Kif26aQ52KG5 1881 aa13.61□□□□□ -0.23
Col17a1-201ENSMUST00000026045 VsirQ9D659 308 aa13.61□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Pate4Q09098 99 aa13.61□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Gm10521E9PZK0 135 aa13.61□□□□□ -0.23
Col17a1-201ENSMUST00000026045 P01787 123 aa13.61□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Foxi1Q922I5 372 aa13.61□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Plxna4Q80UG2 1893 aa13.61□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Cfap46E9Q2C0 2641 aa13.61□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Igkv4-71A0A0G2JEH0 117 aa13.61□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Wnt2P21552 360 aa13.6□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Il22ra2Q80XF5 230 aa13.6□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Rnase2aQ8K196 155 aa13.6□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Phlda3Q9WV95 125 aa13.6□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Gm904Q3V2L5 102 aa13.6□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Rnf144bQ8BKD6 301 aa13.6□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Gm5129F6YHA9 99 aa13.6□□□□□ -0.23
Col17a1-201ENSMUST00000026045 P04945 108 aa13.6□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Ighv1-18A0A0A6YXN4 117 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 BC035044E0CXF8 138 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 P18532 116 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Tcf15Q60756 195 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Lhfpl1Q80SV1 220 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Tmem243B2RVB9 118 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Wdr86D3Z757 380 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Zcchc24B2RVL6 241 aaKnown RBP13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 CrygcQ61597 174 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Dock10Q8BZN6 2150 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Foxf2O54743 446 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Ly86O88188 162 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Arpc1aQ9R0Q6 370 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Plxna2P70207 1894 aa13.59□□□□□ -0.23
Col17a1-201ENSMUST00000026045 P01790 122 aa13.58□□□□□ -0.23
Col17a1-201ENSMUST00000026045 Ly6g6dQ9Z1Q3 135 aa13.58□□□□□ -0.23
Col17a1-201ENSMUST00000026045 MsmbO08540 113 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 P01736 120 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 P01788 123 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 CrygbP04344 175 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Ccl3P10855 92 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Trav14n-2A0A0G2JDF5 121 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Igkv4-63A0A0G2JFU6 117 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Gm7102J3QQ10 178 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Hils1Q9QYL0 170 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Tpsab1Q02844 273 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 GaptQ8CB93 157 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 4931428L18RikQ9D4S9 127 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Colca2F8VPY8 239 aa13.58□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Znf385cA2A5E6 429 aa13.57□□□□□ -0.24
Col17a1-201ENSMUST00000026045 KncnQ307W7 124 aa13.57□□□□□ -0.24
Col17a1-201ENSMUST00000026045 GalmQ8K157 342 aa13.57□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Ss18l1Q8BW22 402 aa13.57□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Trav14-3A0A075B607 120 aa13.57□□□□□ -0.24
Col17a1-201ENSMUST00000026045 HampQ9EQ21 83 aa13.57□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Osr1Q9WVG7 266 aa13.56□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Lrrk1Q3UHC2 2014 aa13.56□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Igkv13-85A0A075B666 115 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms