RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 ManfQ9CXI5 179 aaKnown RBP4.62□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Mrpl14Q9D1I6 145 aa4.62□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Trappc2lQ9JME7 139 aa4.62□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Fhl3Q9R059 289 aa4.62□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 AgrnA2ASQ1 1950 aa4.61□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Igkv14-100A0A0G2JG36 117 aa4.61□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Olfr904Q7TRC9 310 aa4.61□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Tmem160Q9D938 188 aa4.61□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 CntrlA2AL36 2334 aa4.61□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Esp38A8R0X1 80 aa4.61□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Scgb2b24Q7M747 112 aa4.61□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Klhdc1Q80YG3 406 aa4.61□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Shisa2Q8QZV2 295 aa4.61□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Fam110aQ8R184 296 aa4.61□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Odf3Q920N1 254 aa4.61□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Tstd1E9PY03 133 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Gm6871L7N248 545 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 P01793 123 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 P01801 115 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 P01806 116 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Sub1P11031 127 aaKnown RBP4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Tdgf1P51865 171 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Defb25Q30KN8 71 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Vwc2lQ505H4 222 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Rln3Q8CHK2 141 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Tmem219Q9D123 240 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Pgpep1Q9ESW8 209 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Zfp53Q9Z117 652 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Igkv13-85A0A075B666 115 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Iglv3A0A0B4J1K5 122 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Gm4791J3QQ14 102 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Gm26965M0QWH4 86 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 P01792 123 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Gm9733Q1AN91 178 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Gm6899Q3USS0 134 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Tspan13Q9D8C2 204 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 CklfQ9DAS1 152 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Rnf114Q9ET26 229 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Gm15294V9GXA7 121 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Vmn1r61W4VSP5 300 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Eml6Q5SQM0 1958 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Heatr1G3X9B1 2143 aaKnown RBP4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Cacna1bO55017 2327 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Ighv1-22A0A075B5U7 117 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Trav6d-3A0A075B6B3 112 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Ighv8-8A0A0A6YXQ0 119 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Foxl2O88470 375 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Gpx1P11352 201 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Tctn2Q2MV57 700 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Wfdc8Q4KUS1 273 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Trav6-3Q5R1E6 112 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Samd10Q7TST3 202 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 C330021F23RikQ8C7T0 141 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Olfr877Q8VF62 311 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Mmp17Q9R0S3 578 aa4.6□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Gm17359A0A0G2JEB7 487 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Ccl25O35903 144 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 PkigO70139 76 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Igkv7-33P01632 114 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 P01802 115 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Ssbp4Q3U4B1 363 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Tal2Q62282 108 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Gm13199Q8C8E0 125 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Prr13Q9CQJ5 137 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Rchy1Q9CR50 261 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Tpsg1Q9QUL7 311 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Egr4Q9WUF2 478 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Arl3Q9WUL7 182 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Ighv1-39A0A075B5V5 117 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Gm5157A0A087WRH8 301 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Igkv6-25A0A140T8N7 115 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Gm20708H3BKF4 155 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 P01791 123 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 C2cd4dP0CG09 341 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 RhodP97348 210 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Cks1brtQ3UNC9 96 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Il22ra1Q80XZ4 581 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Olfr1184Q8VG86 311 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Obox1Q9D350 204 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Pla2g2fQ9QZT4 168 aa4.59□□□□□ -1.67
Rc3h1-201ENSMUST00000035911 Dock10Q8BZN6 2150 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Trav14d-1A0A075B6B1 121 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Cpsf4lE9Q2N0 280 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Gm21789J3QMZ1 123 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Gm21870J3QPN2 123 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Q3UNZ8 350 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Trav7-2Q5R1I3 112 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Odf3l1Q810P2 275 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Gm9945Q8BNZ3 91 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Timm21Q8CCM6 249 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 PgpQ8CHP8 321 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 AamdcQ8R0P4 122 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Dtx2Q8R3P2 619 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Prb1Q91X93 504 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 8030423J24RikQ9CX45 142 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Ss18l2Q9D174 77 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Defb5Q9EPV9 64 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 IcosQ9WVS0 200 aa4.59□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Ncoa6Q9JL19 2067 aa4.58□□□□□ -1.68
Rc3h1-201ENSMUST00000035911 Ighv2-6A0A075B6A7 116 aa4.58□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms