Protein–RNA interactions for Protein: W4VSP5

Vmn1r61, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r61W4VSP5 Gm25239-201ENSMUST00000174915 86 ntBASIC29.36■■■□□ 2.29
Vmn1r61W4VSP5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Vmn1r61W4VSP5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Vmn1r61W4VSP5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Vmn1r61W4VSP5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Vmn1r61W4VSP5 Gm15042-201ENSMUST00000120212 883 ntBASIC25.94■■□□□ 1.74
Vmn1r61W4VSP5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Vmn1r61W4VSP5 Gm24109-201ENSMUST00000175489 103 ntBASIC25.3■■□□□ 1.64
Vmn1r61W4VSP5 Gm15045-201ENSMUST00000117359 883 ntBASIC25.28■■□□□ 1.64
Vmn1r61W4VSP5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Vmn1r61W4VSP5 Psd-208ENSMUST00000224556 2034 ntBASIC25.12■■□□□ 1.61
Vmn1r61W4VSP5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Vmn1r61W4VSP5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Vmn1r61W4VSP5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Vmn1r61W4VSP5 Gm23366-201ENSMUST00000175022 89 ntBASIC24.66■■□□□ 1.54
Vmn1r61W4VSP5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Vmn1r61W4VSP5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Vmn1r61W4VSP5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vmn1r61W4VSP5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.32■■□□□ 1.48
Vmn1r61W4VSP5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Vmn1r61W4VSP5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Vmn1r61W4VSP5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vmn1r61W4VSP5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vmn1r61W4VSP5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Vmn1r61W4VSP5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Vmn1r61W4VSP5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Vmn1r61W4VSP5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Vmn1r61W4VSP5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Vmn1r61W4VSP5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vmn1r61W4VSP5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vmn1r61W4VSP5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vmn1r61W4VSP5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.78■■□□□ 1.4
Vmn1r61W4VSP5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.74■■□□□ 1.39
Vmn1r61W4VSP5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vmn1r61W4VSP5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Vmn1r61W4VSP5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Vmn1r61W4VSP5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.45■■□□□ 1.34
Vmn1r61W4VSP5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Vmn1r61W4VSP5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.38■■□□□ 1.33
Vmn1r61W4VSP5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Vmn1r61W4VSP5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
Vmn1r61W4VSP5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Vmn1r61W4VSP5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vmn1r61W4VSP5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Vmn1r61W4VSP5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.2■■□□□ 1.3
Vmn1r61W4VSP5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vmn1r61W4VSP5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Vmn1r61W4VSP5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Vmn1r61W4VSP5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vmn1r61W4VSP5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.1■■□□□ 1.29
Vmn1r61W4VSP5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Vmn1r61W4VSP5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Vmn1r61W4VSP5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Vmn1r61W4VSP5 Gm25238-201ENSMUST00000174914 89 ntBASIC23.03■■□□□ 1.28
Vmn1r61W4VSP5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.96■■□□□ 1.27
Vmn1r61W4VSP5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Vmn1r61W4VSP5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Vmn1r61W4VSP5 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.81■■□□□ 1.24
Vmn1r61W4VSP5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
Vmn1r61W4VSP5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Vmn1r61W4VSP5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vmn1r61W4VSP5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.75■■□□□ 1.23
Vmn1r61W4VSP5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vmn1r61W4VSP5 Gm27325-201ENSMUST00000175467 74 ntBASIC22.72■■□□□ 1.23
Vmn1r61W4VSP5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vmn1r61W4VSP5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Vmn1r61W4VSP5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.57■■□□□ 1.2
Vmn1r61W4VSP5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.57■■□□□ 1.2
Vmn1r61W4VSP5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Vmn1r61W4VSP5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.53■■□□□ 1.2
Vmn1r61W4VSP5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.5■■□□□ 1.19
Vmn1r61W4VSP5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vmn1r61W4VSP5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vmn1r61W4VSP5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vmn1r61W4VSP5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r61W4VSP5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Vmn1r61W4VSP5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Vmn1r61W4VSP5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r61W4VSP5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Vmn1r61W4VSP5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vmn1r61W4VSP5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r61W4VSP5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r61W4VSP5 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.29■■□□□ 1.16
Vmn1r61W4VSP5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vmn1r61W4VSP5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.24■■□□□ 1.15
Vmn1r61W4VSP5 Rab21-202ENSMUST00000218831 843 ntBASIC22.24■■□□□ 1.15
Vmn1r61W4VSP5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r61W4VSP5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r61W4VSP5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r61W4VSP5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Vmn1r61W4VSP5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r61W4VSP5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r61W4VSP5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.16■■□□□ 1.14
Vmn1r61W4VSP5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vmn1r61W4VSP5 Gm25262-201ENSMUST00000174934 133 ntBASIC22.13■■□□□ 1.13
Vmn1r61W4VSP5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.13■■□□□ 1.13
Vmn1r61W4VSP5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r61W4VSP5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Vmn1r61W4VSP5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vmn1r61W4VSP5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms