Protein–RNA interactions for Protein: W4VSP5

Vmn1r61, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r61W4VSP5 Gm25239-201ENSMUST00000174915 86 ntBASIC29,36■■■□□ 2,29
Vmn1r61W4VSP5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27,04■■□□□ 1,92
Vmn1r61W4VSP5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26,9■■□□□ 1,9
Vmn1r61W4VSP5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26,8■■□□□ 1,88
Vmn1r61W4VSP5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25,98■■□□□ 1,75
Vmn1r61W4VSP5 Gm15042-201ENSMUST00000120212 883 ntBASIC25,94■■□□□ 1,74
Vmn1r61W4VSP5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25,91■■□□□ 1,74
Vmn1r61W4VSP5 Gm24109-201ENSMUST00000175489 103 ntBASIC25,3■■□□□ 1,64
Vmn1r61W4VSP5 Gm15045-201ENSMUST00000117359 883 ntBASIC25,28■■□□□ 1,64
Vmn1r61W4VSP5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Vmn1r61W4VSP5 Psd-208ENSMUST00000224556 2034 ntBASIC25,12■■□□□ 1,61
Vmn1r61W4VSP5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24,83■■□□□ 1,57
Vmn1r61W4VSP5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24,78■■□□□ 1,56
Vmn1r61W4VSP5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24,77■■□□□ 1,56
Vmn1r61W4VSP5 Gm23366-201ENSMUST00000175022 89 ntBASIC24,66■■□□□ 1,54
Vmn1r61W4VSP5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,62■■□□□ 1,53
Vmn1r61W4VSP5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24,47■■□□□ 1,51
Vmn1r61W4VSP5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24,46■■□□□ 1,51
Vmn1r61W4VSP5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24,32■■□□□ 1,48
Vmn1r61W4VSP5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,31■■□□□ 1,48
Vmn1r61W4VSP5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Vmn1r61W4VSP5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24,13■■□□□ 1,45
Vmn1r61W4VSP5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24,12■■□□□ 1,45
Vmn1r61W4VSP5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24,07■■□□□ 1,44
Vmn1r61W4VSP5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24,03■■□□□ 1,44
Vmn1r61W4VSP5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1,43
Vmn1r61W4VSP5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23,99■■□□□ 1,43
Vmn1r61W4VSP5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23,91■■□□□ 1,42
Vmn1r61W4VSP5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23,87■■□□□ 1,41
Vmn1r61W4VSP5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23,85■■□□□ 1,41
Vmn1r61W4VSP5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23,79■■□□□ 1,4
Vmn1r61W4VSP5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23,78■■□□□ 1,4
Vmn1r61W4VSP5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23,74■■□□□ 1,39
Vmn1r61W4VSP5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23,74■■□□□ 1,39
Vmn1r61W4VSP5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23,61■■□□□ 1,37
Vmn1r61W4VSP5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23,5■■□□□ 1,35
Vmn1r61W4VSP5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23,45■■□□□ 1,34
Vmn1r61W4VSP5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23,45■■□□□ 1,34
Vmn1r61W4VSP5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23,38■■□□□ 1,33
Vmn1r61W4VSP5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,36■■□□□ 1,33
Vmn1r61W4VSP5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23,34■■□□□ 1,33
Vmn1r61W4VSP5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23,34■■□□□ 1,33
Vmn1r61W4VSP5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23,28■■□□□ 1,32
Vmn1r61W4VSP5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23,27■■□□□ 1,32
Vmn1r61W4VSP5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23,2■■□□□ 1,3
Vmn1r61W4VSP5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23,17■■□□□ 1,3
Vmn1r61W4VSP5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23,16■■□□□ 1,3
Vmn1r61W4VSP5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,15■■□□□ 1,3
Vmn1r61W4VSP5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23,12■■□□□ 1,29
Vmn1r61W4VSP5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23,1■■□□□ 1,29
Vmn1r61W4VSP5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23,07■■□□□ 1,28
Vmn1r61W4VSP5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23,06■■□□□ 1,28
Vmn1r61W4VSP5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23,05■■□□□ 1,28
Vmn1r61W4VSP5 Gm25238-201ENSMUST00000174914 89 ntBASIC23,03■■□□□ 1,28
Vmn1r61W4VSP5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22,96■■□□□ 1,27
Vmn1r61W4VSP5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22,94■■□□□ 1,26
Vmn1r61W4VSP5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22,83■■□□□ 1,25
Vmn1r61W4VSP5 Gm10524-201ENSMUST00000181931 1893 ntBASIC22,81■■□□□ 1,24
Vmn1r61W4VSP5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22,77■■□□□ 1,24
Vmn1r61W4VSP5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22,77■■□□□ 1,23
Vmn1r61W4VSP5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22,76■■□□□ 1,23
Vmn1r61W4VSP5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22,75■■□□□ 1,23
Vmn1r61W4VSP5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22,74■■□□□ 1,23
Vmn1r61W4VSP5 Gm27325-201ENSMUST00000175467 74 ntBASIC22,72■■□□□ 1,23
Vmn1r61W4VSP5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22,66■■□□□ 1,22
Vmn1r61W4VSP5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22,65■■□□□ 1,22
Vmn1r61W4VSP5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22,57■■□□□ 1,2
Vmn1r61W4VSP5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22,57■■□□□ 1,2
Vmn1r61W4VSP5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22,55■■□□□ 1,2
Vmn1r61W4VSP5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22,53■■□□□ 1,2
Vmn1r61W4VSP5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22,5■■□□□ 1,19
Vmn1r61W4VSP5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22,47■■□□□ 1,19
Vmn1r61W4VSP5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22,47■■□□□ 1,19
Vmn1r61W4VSP5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22,47■■□□□ 1,19
Vmn1r61W4VSP5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22,43■■□□□ 1,18
Vmn1r61W4VSP5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22,4■■□□□ 1,18
Vmn1r61W4VSP5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22,4■■□□□ 1,18
Vmn1r61W4VSP5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22,38■■□□□ 1,17
Vmn1r61W4VSP5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22,36■■□□□ 1,17
Vmn1r61W4VSP5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22,33■■□□□ 1,17
Vmn1r61W4VSP5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22,3■■□□□ 1,16
Vmn1r61W4VSP5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22,29■■□□□ 1,16
Vmn1r61W4VSP5 Gm42596-201ENSMUST00000196305 1958 ntBASIC22,29■■□□□ 1,16
Vmn1r61W4VSP5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,28■■□□□ 1,16
Vmn1r61W4VSP5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22,24■■□□□ 1,15
Vmn1r61W4VSP5 Rab21-202ENSMUST00000218831 843 ntBASIC22,24■■□□□ 1,15
Vmn1r61W4VSP5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,21■■□□□ 1,15
Vmn1r61W4VSP5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22,2■■□□□ 1,14
Vmn1r61W4VSP5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22,19■■□□□ 1,14
Vmn1r61W4VSP5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22,17■■□□□ 1,14
Vmn1r61W4VSP5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22,16■■□□□ 1,14
Vmn1r61W4VSP5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22,16■■□□□ 1,14
Vmn1r61W4VSP5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22,16■■□□□ 1,14
Vmn1r61W4VSP5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22,15■■□□□ 1,14
Vmn1r61W4VSP5 Gm25262-201ENSMUST00000174934 133 ntBASIC22,13■■□□□ 1,13
Vmn1r61W4VSP5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22,13■■□□□ 1,13
Vmn1r61W4VSP5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22,11■■□□□ 1,13
Vmn1r61W4VSP5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22,06■■□□□ 1,12
Vmn1r61W4VSP5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22,03■■□□□ 1,12
Vmn1r61W4VSP5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22,03■■□□□ 1,12
Retrieved 100 of 76,532 protein–RNA pairs in 54,6 ms