RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Olfr976Q8VF15 326 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Q9D727 114 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Dolpp1Q9JMF7 238 aa13.11□□□□□ -0.31
Trim28-201ENSMUST00000005705 Trav7n-4A0A075B620 113 aa13.1□□□□□ -0.31
Trim28-201ENSMUST00000005705 P04946 108 aa13.1□□□□□ -0.31
Trim28-201ENSMUST00000005705 Gm6993A0A1W2P738 69 aa13.1□□□□□ -0.31
Trim28-201ENSMUST00000005705 Slc25a5P51881 298 aaKnown RBP13.1□□□□□ -0.31
Trim28-201ENSMUST00000005705 Ube2g1P62254 170 aa13.1□□□□□ -0.31
Trim28-201ENSMUST00000005705 Loxl1P97873 607 aa13.1□□□□□ -0.31
Trim28-201ENSMUST00000005705 SeleQ00690 612 aa13.1□□□□□ -0.31
Trim28-201ENSMUST00000005705 V1ra8Q9EQ48 279 aa13.1□□□□□ -0.31
Trim28-201ENSMUST00000005705 Ly96Q9JHF9 160 aa13.1□□□□□ -0.31
Trim28-201ENSMUST00000005705 Trav9d-1A0A075B699 112 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Trav3n-3A0A0G2JEM0 114 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 BC030500E9Q6W0 185 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr1331K7N684 317 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 RhodP97348 210 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr1333Q7TQV7 317 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Smim19Q80ZU4 107 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Ap5s1Q9D742 170 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 9830107B12RikD3Z5D6 160 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Gm21775J3KMK6 180 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 P18532 116 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 SlpiP97430 131 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Cd52Q64389 74 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Hes7Q8BKT2 225 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Ighv9-2A0A0B4J1J4 117 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Ccl6P27784 116 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Olfr965Q7TRA7 312 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Rbfox2Q8BP71 449 aaKnown RBP13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Znf641Q8BZ34 422 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Ammecr1lQ8JZZ6 310 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Slc17a9Q8VCL5 447 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Sh2d6Q9D413 297 aa13.09□□□□□ -0.31
Trim28-201ENSMUST00000005705 Trav6d-3A0A075B6B3 112 aa13.08□□□□□ -0.32
Trim28-201ENSMUST00000005705 Gimap1P70224 277 aa13.08□□□□□ -0.32
Trim28-201ENSMUST00000005705 Trav6-3Q5R1E6 112 aa13.08□□□□□ -0.32
Trim28-201ENSMUST00000005705 Olfr984Q8VFN1 314 aa13.08□□□□□ -0.32
Trim28-201ENSMUST00000005705 Olfr961Q9EQ84 314 aa13.08□□□□□ -0.32
Trim28-201ENSMUST00000005705 Gm21974F6W3F3 119 aa13.08□□□□□ -0.32
Trim28-201ENSMUST00000005705 Trav6-2Q5R1I4 113 aa13.08□□□□□ -0.32
Trim28-201ENSMUST00000005705 Dido1Q8C9B9 2256 aaKnown RBP13.08□□□□□ -0.32
Trim28-201ENSMUST00000005705 TroQ6DIC6 2087 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 AsipQ03288 131 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 Tbr1Q64336 681 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 Vmn1r202Q8R259 302 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 Hcfc2Q9D968 241 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 Gsx1P31315 261 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 Prop1P97458 223 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 A930003A15RikQ3U552 87 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 SelplgQ62170 397 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 Cox19Q8K0C8 92 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 Immp1lQ9CQU8 166 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 Abca2P41234 2434 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 Olfr1419Q7TQS2 343 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 Scnm1Q8K136 229 aa13.07□□□□□ -0.32
Trim28-201ENSMUST00000005705 Notch3Q61982 2318 aa13.06□□□□□ -0.32
Trim28-201ENSMUST00000005705 Znf385cA2A5E6 429 aa13.06□□□□□ -0.32
Trim28-201ENSMUST00000005705 Wfdc11A2A5H7 82 aa13.06□□□□□ -0.32
Trim28-201ENSMUST00000005705 Olfr978E9Q985 311 aa13.06□□□□□ -0.32
Trim28-201ENSMUST00000005705 Fgfbp1O70514 251 aa13.06□□□□□ -0.32
Trim28-201ENSMUST00000005705 Cdkn1bP46414 197 aa13.06□□□□□ -0.32
Trim28-201ENSMUST00000005705 Bmp5P49003 452 aa13.06□□□□□ -0.32
Trim28-201ENSMUST00000005705 Klf13Q9JJZ6 289 aa13.06□□□□□ -0.32
Trim28-201ENSMUST00000005705 Trbv26A0A0B4J1P5 115 aa13.06□□□□□ -0.32
Trim28-201ENSMUST00000005705 Cited2O35740 269 aa13.06□□□□□ -0.32
Trim28-201ENSMUST00000005705 Phxr2P15972 65 aa13.06□□□□□ -0.32
Trim28-201ENSMUST00000005705 Gm36368A0A1D5RLK8 91 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 Vmn1r1E9PVR6 306 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 1700003H04RikE9PXM2 192 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 Olfr1402Q8VET1 320 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 Tm4sf20Q9CQY8 226 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 Q9D7E4 109 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 Fam213bQ9DB60 201 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 Ptpn13Q64512 2453 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 Gm21900J3QP38 180 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 Gm26965M0QWH4 86 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 Lynx1P0DP60 116 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 Hes1P35428 282 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 Abca12E9Q876 2595 aa13.05□□□□□ -0.32
Trim28-201ENSMUST00000005705 NgfP01139 241 aa13.04□□□□□ -0.32
Trim28-201ENSMUST00000005705 ErhP84089 104 aa13.04□□□□□ -0.32
Trim28-201ENSMUST00000005705 Gm10645Q3UPY1 145 aa13.04□□□□□ -0.32
Trim28-201ENSMUST00000005705 Ss18l1Q8BW22 402 aa13.04□□□□□ -0.32
Trim28-201ENSMUST00000005705 Gm9944Q8C559 102 aa13.04□□□□□ -0.32
Trim28-201ENSMUST00000005705 Olfr958Q8VEY3 312 aa13.04□□□□□ -0.32
Trim28-201ENSMUST00000005705 Fam206aQ80ZQ9 193 aaKnown RBP13.04□□□□□ -0.32
Trim28-201ENSMUST00000005705 Olfr982Q8VGB3 321 aa13.04□□□□□ -0.32
Trim28-201ENSMUST00000005705 Oxld1Q9CR10 201 aa13.04□□□□□ -0.32
Trim28-201ENSMUST00000005705 AhspQ9CY02 102 aa13.04□□□□□ -0.32
Trim28-201ENSMUST00000005705 Ighv5-9A0A075B5Q2 117 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 Rnf212F6TQD1 307 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 LfngO09010 378 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 Q08AU9 97 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 Tctex1d2Q9CQ66 144 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 Olfr954Q9EQB6 314 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 Platr25A0A1Y7VIZ1 466 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 Itgb1bp1O35671 200 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 P01736 120 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 Tpsab1Q02844 273 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms