Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 Gm25239-201ENSMUST00000174915 86 ntBASIC31,16■■■□□ 2,58
Sh2d6Q9D413 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28,7■■■□□ 2,18
Sh2d6Q9D413 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28,33■■■□□ 2,13
Sh2d6Q9D413 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28,06■■■□□ 2,08
Sh2d6Q9D413 Gm15042-201ENSMUST00000120212 883 ntBASIC27,5■■□□□ 1,99
Sh2d6Q9D413 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27,41■■□□□ 1,98
Sh2d6Q9D413 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27,11■■□□□ 1,93
Sh2d6Q9D413 Gm15045-201ENSMUST00000117359 883 ntBASIC26,91■■□□□ 1,9
Sh2d6Q9D413 Gm24109-201ENSMUST00000175489 103 ntBASIC26,87■■□□□ 1,89
Sh2d6Q9D413 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,84
Sh2d6Q9D413 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Sh2d6Q9D413 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26,27■■□□□ 1,8
Sh2d6Q9D413 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26,09■■□□□ 1,77
Sh2d6Q9D413 Gm23366-201ENSMUST00000175022 89 ntBASIC26,08■■□□□ 1,77
Sh2d6Q9D413 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25,96■■□□□ 1,75
Sh2d6Q9D413 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Sh2d6Q9D413 Psd-208ENSMUST00000224556 2034 ntBASIC25,92■■□□□ 1,74
Sh2d6Q9D413 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Sh2d6Q9D413 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25,71■■□□□ 1,71
Sh2d6Q9D413 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25,67■■□□□ 1,7
Sh2d6Q9D413 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25,59■■□□□ 1,69
Sh2d6Q9D413 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25,59■■□□□ 1,69
Sh2d6Q9D413 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25,47■■□□□ 1,67
Sh2d6Q9D413 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25,46■■□□□ 1,67
Sh2d6Q9D413 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25,35■■□□□ 1,65
Sh2d6Q9D413 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25,34■■□□□ 1,65
Sh2d6Q9D413 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25,32■■□□□ 1,64
Sh2d6Q9D413 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25,31■■□□□ 1,64
Sh2d6Q9D413 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25,22■■□□□ 1,63
Sh2d6Q9D413 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Sh2d6Q9D413 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25,07■■□□□ 1,6
Sh2d6Q9D413 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24,98■■□□□ 1,59
Sh2d6Q9D413 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24,87■■□□□ 1,57
Sh2d6Q9D413 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24,87■■□□□ 1,57
Sh2d6Q9D413 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24,84■■□□□ 1,57
Sh2d6Q9D413 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24,68■■□□□ 1,54
Sh2d6Q9D413 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24,63■■□□□ 1,53
Sh2d6Q9D413 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Sh2d6Q9D413 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Sh2d6Q9D413 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24,53■■□□□ 1,52
Sh2d6Q9D413 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24,51■■□□□ 1,51
Sh2d6Q9D413 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24,51■■□□□ 1,51
Sh2d6Q9D413 Gm25238-201ENSMUST00000174914 89 ntBASIC24,49■■□□□ 1,51
Sh2d6Q9D413 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24,48■■□□□ 1,51
Sh2d6Q9D413 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,47■■□□□ 1,51
Sh2d6Q9D413 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,39■■□□□ 1,5
Sh2d6Q9D413 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24,3■■□□□ 1,48
Sh2d6Q9D413 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24,29■■□□□ 1,48
Sh2d6Q9D413 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24,28■■□□□ 1,48
Sh2d6Q9D413 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24,27■■□□□ 1,48
Sh2d6Q9D413 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,22■■□□□ 1,47
Sh2d6Q9D413 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24,18■■□□□ 1,46
Sh2d6Q9D413 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24,13■■□□□ 1,45
Sh2d6Q9D413 Gm27325-201ENSMUST00000175467 74 ntBASIC24,12■■□□□ 1,45
Sh2d6Q9D413 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24,1■■□□□ 1,45
Sh2d6Q9D413 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24,09■■□□□ 1,45
Sh2d6Q9D413 Gm10524-201ENSMUST00000181931 1893 ntBASIC24,08■■□□□ 1,45
Sh2d6Q9D413 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24,07■■□□□ 1,44
Sh2d6Q9D413 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24,05■■□□□ 1,44
Sh2d6Q9D413 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23,98■■□□□ 1,43
Sh2d6Q9D413 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23,96■■□□□ 1,43
Sh2d6Q9D413 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23,91■■□□□ 1,42
Sh2d6Q9D413 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23,91■■□□□ 1,42
Sh2d6Q9D413 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23,87■■□□□ 1,41
Sh2d6Q9D413 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23,87■■□□□ 1,41
Sh2d6Q9D413 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23,83■■□□□ 1,41
Sh2d6Q9D413 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23,81■■□□□ 1,4
Sh2d6Q9D413 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23,78■■□□□ 1,4
Sh2d6Q9D413 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23,78■■□□□ 1,4
Sh2d6Q9D413 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23,77■■□□□ 1,4
Sh2d6Q9D413 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23,75■■□□□ 1,39
Sh2d6Q9D413 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23,74■■□□□ 1,39
Sh2d6Q9D413 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23,72■■□□□ 1,39
Sh2d6Q9D413 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,71■■□□□ 1,39
Sh2d6Q9D413 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23,69■■□□□ 1,38
Sh2d6Q9D413 Gm42596-201ENSMUST00000196305 1958 ntBASIC23,62■■□□□ 1,37
Sh2d6Q9D413 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23,61■■□□□ 1,37
Sh2d6Q9D413 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23,54■■□□□ 1,36
Sh2d6Q9D413 Rab21-202ENSMUST00000218831 843 ntBASIC23,53■■□□□ 1,36
Sh2d6Q9D413 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23,51■■□□□ 1,35
Sh2d6Q9D413 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23,5■■□□□ 1,35
Sh2d6Q9D413 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23,49■■□□□ 1,35
Sh2d6Q9D413 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23,49■■□□□ 1,35
Sh2d6Q9D413 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23,43■■□□□ 1,34
Sh2d6Q9D413 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,42■■□□□ 1,34
Sh2d6Q9D413 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23,36■■□□□ 1,33
Sh2d6Q9D413 Gm25262-201ENSMUST00000174934 133 ntBASIC23,36■■□□□ 1,33
Sh2d6Q9D413 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23,3■■□□□ 1,32
Sh2d6Q9D413 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23,3■■□□□ 1,32
Sh2d6Q9D413 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23,25■■□□□ 1,31
Sh2d6Q9D413 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23,24■■□□□ 1,31
Sh2d6Q9D413 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23,23■■□□□ 1,31
Sh2d6Q9D413 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23,23■■□□□ 1,31
Sh2d6Q9D413 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23,19■■□□□ 1,3
Sh2d6Q9D413 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23,18■■□□□ 1,3
Sh2d6Q9D413 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23,18■■□□□ 1,3
Sh2d6Q9D413 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23,13■■□□□ 1,29
Sh2d6Q9D413 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23,12■■□□□ 1,29
Sh2d6Q9D413 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23,09■■□□□ 1,29
Sh2d6Q9D413 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Retrieved 100 of 76,532 protein–RNA pairs in 10,8 ms