Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Gm25239-201ENSMUST00000174915 86 ntBASIC29,82■■■□□ 2,36
Hes1P35428 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27,45■■□□□ 1,98
Hes1P35428 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27,15■■□□□ 1,94
Hes1P35428 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27,12■■□□□ 1,93
Hes1P35428 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26,47■■□□□ 1,83
Hes1P35428 Gm15042-201ENSMUST00000120212 883 ntBASIC26,37■■□□□ 1,81
Hes1P35428 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26,21■■□□□ 1,79
Hes1P35428 Gm15045-201ENSMUST00000117359 883 ntBASIC25,75■■□□□ 1,71
Hes1P35428 Gm24109-201ENSMUST00000175489 103 ntBASIC25,67■■□□□ 1,7
Hes1P35428 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25,55■■□□□ 1,68
Hes1P35428 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25,42■■□□□ 1,66
Hes1P35428 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Hes1P35428 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25,13■■□□□ 1,61
Hes1P35428 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25,08■■□□□ 1,61
Hes1P35428 Psd-208ENSMUST00000224556 2034 ntBASIC25,07■■□□□ 1,6
Hes1P35428 Gm23366-201ENSMUST00000175022 89 ntBASIC25■■□□□ 1,59
Hes1P35428 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25■■□□□ 1,59
Hes1P35428 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24,85■■□□□ 1,57
Hes1P35428 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24,81■■□□□ 1,56
Hes1P35428 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24,81■■□□□ 1,56
Hes1P35428 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24,7■■□□□ 1,54
Hes1P35428 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,69■■□□□ 1,54
Hes1P35428 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24,61■■□□□ 1,53
Hes1P35428 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24,53■■□□□ 1,52
Hes1P35428 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24,52■■□□□ 1,52
Hes1P35428 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24,48■■□□□ 1,51
Hes1P35428 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24,45■■□□□ 1,5
Hes1P35428 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24,37■■□□□ 1,49
Hes1P35428 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24,36■■□□□ 1,49
Hes1P35428 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24,33■■□□□ 1,49
Hes1P35428 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24,29■■□□□ 1,48
Hes1P35428 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24,27■■□□□ 1,48
Hes1P35428 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24,24■■□□□ 1,47
Hes1P35428 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24,07■■□□□ 1,44
Hes1P35428 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24,02■■□□□ 1,44
Hes1P35428 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23,96■■□□□ 1,43
Hes1P35428 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23,76■■□□□ 1,39
Hes1P35428 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23,73■■□□□ 1,39
Hes1P35428 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23,65■■□□□ 1,38
Hes1P35428 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23,65■■□□□ 1,38
Hes1P35428 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23,65■■□□□ 1,38
Hes1P35428 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23,62■■□□□ 1,37
Hes1P35428 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23,6■■□□□ 1,37
Hes1P35428 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Hes1P35428 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,53■■□□□ 1,36
Hes1P35428 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23,51■■□□□ 1,35
Hes1P35428 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23,48■■□□□ 1,35
Hes1P35428 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23,46■■□□□ 1,35
Hes1P35428 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23,45■■□□□ 1,34
Hes1P35428 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23,41■■□□□ 1,34
Hes1P35428 Gm25238-201ENSMUST00000174914 89 ntBASIC23,41■■□□□ 1,34
Hes1P35428 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23,39■■□□□ 1,33
Hes1P35428 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23,38■■□□□ 1,33
Hes1P35428 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23,34■■□□□ 1,33
Hes1P35428 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23,33■■□□□ 1,33
Hes1P35428 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23,31■■□□□ 1,32
Hes1P35428 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23,3■■□□□ 1,32
Hes1P35428 Gm10524-201ENSMUST00000181931 1893 ntBASIC23,28■■□□□ 1,32
Hes1P35428 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23,24■■□□□ 1,31
Hes1P35428 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,22■■□□□ 1,31
Hes1P35428 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23,19■■□□□ 1,3
Hes1P35428 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23,13■■□□□ 1,29
Hes1P35428 Gm27325-201ENSMUST00000175467 74 ntBASIC23,12■■□□□ 1,29
Hes1P35428 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23,09■■□□□ 1,29
Hes1P35428 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23,08■■□□□ 1,28
Hes1P35428 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Hes1P35428 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23,05■■□□□ 1,28
Hes1P35428 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23,05■■□□□ 1,28
Hes1P35428 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23,03■■□□□ 1,28
Hes1P35428 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1,27
Hes1P35428 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1,27
Hes1P35428 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22,95■■□□□ 1,26
Hes1P35428 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22,94■■□□□ 1,26
Hes1P35428 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22,91■■□□□ 1,26
Hes1P35428 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22,89■■□□□ 1,25
Hes1P35428 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22,86■■□□□ 1,25
Hes1P35428 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22,86■■□□□ 1,25
Hes1P35428 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22,85■■□□□ 1,25
Hes1P35428 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22,83■■□□□ 1,25
Hes1P35428 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22,82■■□□□ 1,24
Hes1P35428 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22,81■■□□□ 1,24
Hes1P35428 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22,76■■□□□ 1,23
Hes1P35428 Gm42596-201ENSMUST00000196305 1958 ntBASIC22,76■■□□□ 1,23
Hes1P35428 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22,71■■□□□ 1,23
Hes1P35428 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22,65■■□□□ 1,22
Hes1P35428 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22,63■■□□□ 1,21
Hes1P35428 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22,6■■□□□ 1,21
Hes1P35428 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22,57■■□□□ 1,2
Hes1P35428 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22,57■■□□□ 1,2
Hes1P35428 Rab21-202ENSMUST00000218831 843 ntBASIC22,55■■□□□ 1,2
Hes1P35428 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
Hes1P35428 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
Hes1P35428 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22,46■■□□□ 1,19
Hes1P35428 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22,45■■□□□ 1,18
Hes1P35428 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22,4■■□□□ 1,18
Hes1P35428 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22,38■■□□□ 1,17
Hes1P35428 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22,38■■□□□ 1,17
Hes1P35428 Gm25262-201ENSMUST00000174934 133 ntBASIC22,37■■□□□ 1,17
Hes1P35428 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22,35■■□□□ 1,17
Hes1P35428 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22,34■■□□□ 1,17
Retrieved 100 of 76,532 protein–RNA pairs in 43,2 ms