RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Cd59aO55186 123 aa11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 CompQ9R0G6 755 aa11.43□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Slc16a4Q8R0M8 500 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Dazap2Q9DCP9 168 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Ighv5-16A0A0B4J1P4 117 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 PpoxP51175 477 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Jsrp1Q3MI48 332 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 H2al3Q9D4U4 128 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Wdr31Q9JHB4 367 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Foxh1O88621 401 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Atp5g2P56383 146 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Znf474Q6V5K9 347 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Slc35d2Q762D5 326 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 AplnrQ9WV08 377 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Gm6525A0A0A6YW33 106 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 P01726 129 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Cdkn1aP39689 159 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Isg15Q64339 161 aaKnown RBP11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Defb3Q9WTL0 63 aa11.42□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Ube2v1Q9CZY3 147 aa11.41□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Rnase6Q9D244 153 aa11.41□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 GgctQ9D7X8 188 aa11.41□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Hils1Q9QYL0 170 aa11.41□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Igkv5-37A0A140T8N4 115 aa11.41□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Gm45717A0A1B0GT68 152 aa11.41□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Gm16503Q8C6M9 103 aa11.41□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Cacna1iE9Q7P2 2199 aa11.41□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Ube2cQ9D1C1 179 aa11.41□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Iglc2P01844 104 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Mob3bQ8VE04 216 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Hyls1Q9CXX0 307 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Olfr177E9Q7W1 309 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 P01649 108 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Wnt5bP22726 359 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Rspo3Q2TJ95 277 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Morn2Q6UL01 79 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Trav6d-3A0A075B6B3 112 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Gm45871A0A1B0GRI9 540 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Efnb3O35393 340 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Ascl2O35885 263 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Cox6a1P43024 111 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Pax8Q00288 457 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Cops9Q3U898 57 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Trav6-3Q5R1E6 112 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 CcsQ9WU84 274 aa11.4□□□□□ -0.58
Pcdha1-202ENSMUST00000193839 Gm4792Q569Q2 183 aa11.4□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 D630044L22RikQ8C701 164 aa11.4□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Bles03Q8VD62 251 aa11.4□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 TirapQ99JY1 241 aa11.4□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 4930583I09RikQ9D2E3 102 aa11.4□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Trav4-4-dv10A0A075B651 110 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Ighv8-2A0A0A6YW58 119 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Gm21974F6W3F3 119 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Olfr1209Q3SXJ3 310 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Klhdc1Q80YG3 406 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 A730015C16RikQ8C992 119 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Ssbp1Q9CYR0 152 aaKnown RBP11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Rpl36-ps4A0A140T8U4 117 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Cphx2Q8BX39 182 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Olfr33Q8VGX7 318 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 4931428L18RikQ9D4S9 127 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Arpc1aQ9R0Q6 370 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 A0A1Y7VLU2 103 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Dtx1Q61010 627 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Eid2bE9Q2Y0 151 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 1700067P10RikG3X8U2 183 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Rnf5O35445 180 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Wipf3P0C7L0 485 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Mogat1Q91ZV4 335 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Jmjd1cQ69ZK6 2350 aa11.39□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Igkv12-89A0A0G2JGW8 112 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 P01660 111 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 9430097D07RikQ8BS47 195 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Atp23Q9CWQ3 201 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Tmem160Q9D938 188 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Ighv1-20A0A0A6YX66 117 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Gm45844A0A1B0GRQ2 137 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Tmem170bP86050 132 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Zic3Q62521 466 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Cdkn2aQ64364 169 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 EppinQ9DA01 134 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Timm10bQ9WV96 100 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 TymsP07607 307 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Ripply2Q2WG76 128 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Spint3Q3UW09 88 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Q8BG31 207 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Ammecr1lQ8JZZ6 310 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Ighv1-34A0A075B5V2 117 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Thap8E9Q695 213 aa11.38□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Trav7n-4A0A075B620 113 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Trbv12-2A0A0B4J1H1 124 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 PlnP61014 52 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Tmem241Q3UME2 297 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Olfr553Q7TRS6 326 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Cbln3Q9JHG0 197 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Cd5lQ9QWK4 352 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Lnp1A0A1B0GSK3 178 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Olfr1382Q7TQT3 311 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Hdgfl3Q9JMG7 202 aa11.37□□□□□ -0.59
Pcdha1-202ENSMUST00000193839 Rspo1Q9Z132 265 aa11.37□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 107.2 ms