RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Gm10384Q3UQ87 92 aa12.83□□□□□ -0.35
Ccdc88b-201ENSMUST00000113440 Poc1aQ8JZX3 405 aa12.83□□□□□ -0.35
Ccdc88b-201ENSMUST00000113440 Ormdl3Q9CPZ6 153 aa12.83□□□□□ -0.35
Ccdc88b-201ENSMUST00000113440 Lamtor2Q9JHS3 125 aa12.83□□□□□ -0.35
Ccdc88b-201ENSMUST00000113440 Gm17677B3GLJ5 116 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Tex54G3UW99 86 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Foxh1O88621 401 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 P18526 117 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Otx1P80205 355 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Znf329Q6GQR8 522 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Saxo2Q8BQB6 394 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Spcs1Q9D958 161 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Npc2Q9Z0J0 149 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Igkv4-51A0N8I8 119 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Trdv4Q5R1A3 115 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 1700067P10RikG3X8U2 183 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Olfr1382Q7TQT3 311 aa12.83□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Klrd1O54707 179 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 P01723 117 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Arhgap21Q6DFV3 1944 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Rpl36-ps4A0A140T8U4 117 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Defa-rs7P50715 91 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Znf664Q4VA44 261 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Hist2h2beQ64524 126 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Timm21Q8CCM6 249 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 St6galnac6Q9JM95 333 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Gpr132Q9Z282 382 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Gm45844A0A1B0GRQ2 137 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Zfp648D3Z0W3 525 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Wdr83osQ6ZWX0 106 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 C330021F23RikQ8C7T0 141 aa12.82□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Gm45871A0A1B0GRI9 540 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Olfr779E9PUS9 130 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Tnfsf11O35235 316 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Prelid3aQ8VE85 172 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Prr23a3Q9CWP9 254 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Rabac1Q9Z0S9 185 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Gm21974F6W3F3 119 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 EppinQ9DA01 134 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Cep350E9Q309 3095 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Foxi3E0CZH3 425 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Gm21913J3KML9 361 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Gm21776J3QPJ5 361 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 LtaP09225 202 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 AvpP35455 168 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Timp3P39876 211 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Gfra1P97785 468 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Slc35d2Q762D5 326 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Gpr35Q9ES90 307 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Olfr1192-ps1A0A1L1SRD7 309 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Pax8Q00288 457 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 MymxQ2Q5T5 84 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Spink2Q8BMY7 86 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Klhdc3Q8VEM9 382 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Cox6cQ9CPQ1 76 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 CcsQ9WU84 274 aa12.81□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Ighv1-15A0A0A6YXA5 117 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Ighv1-36A0A0A6YXT2 117 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Wnt5bP22726 359 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Gm21394Q497R7 227 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Tmem100Q9CQG9 134 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 TymsP07607 307 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 P18528 98 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 ChtopQ9CY57 249 aaKnown RBP12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Iglc2P01844 104 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Ifitm10Q8BR26 201 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 PgpQ8CHP8 321 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Errfi1Q99JZ7 461 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Srd5a2Q99N99 254 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Eid2bE9Q2Y0 151 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Foxl2O88470 375 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 SeboxP70368 190 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Col5a3Q9JLI2 1739 aa12.8□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Rnase2O35291 155 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 CampP51437 172 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Cd300eQ8K249 196 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Mettl26Q9DCS2 204 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Ccpg1osV9GXK1 122 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 CadB2RQC6 2225 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Cdkn1aP39689 159 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Shisal1Q0VBP7 198 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Tmem177Q8BPE4 311 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Gm10118Q8C8J5 116 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Olfr484Q8VFD3 321 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Osr1Q9WVG7 266 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Pcnx3Q8VI59 2028 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 BC053393A0A0B4J1F6 192 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Pax1P09084 446 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Olfr1419Q7TQS2 343 aa12.79□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Trbv19A0A0B4J1H4 117 aa12.78□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Ascl2O35885 263 aa12.78□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Fbln7Q501P1 440 aa12.78□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 D630044L22RikQ8C701 164 aa12.78□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Olfr976Q8VF15 326 aa12.78□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Efnb3O35393 340 aa12.78□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Zic4Q61467 341 aa12.78□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 9930022D16RikQ8BG27 128 aa12.78□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 1700001C19RikQ8K168 210 aa12.78□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Atp5lQ9CPQ8 103 aa12.78□□□□□ -0.36
Ccdc88b-201ENSMUST00000113440 Hdgfl3Q9JMG7 202 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms