RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 BmperQ8CJ69 685 aa17.83■□□□□ 0.45
Smarcc1-201ENSMUST00000088716 Higd1bQ99JY6 98 aa17.83■□□□□ 0.45
Smarcc1-201ENSMUST00000088716 Chd3B1AR17 2055 aa17.83■□□□□ 0.45
Smarcc1-201ENSMUST00000088716 Znf474Q6V5K9 347 aa17.83■□□□□ 0.45
Smarcc1-201ENSMUST00000088716 Spcs1Q9D958 161 aa17.83■□□□□ 0.45
Smarcc1-201ENSMUST00000088716 Spsb3Q571F5 354 aa17.83■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Hspe1Q64433 102 aaKnown RBP17.83■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Rhno1Q8K3A4 235 aa17.83■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Sh3bgrl3Q91VW3 93 aa17.83■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Znf22Q9ERU3 237 aa17.83■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Gm13030A2APQ6 143 aa17.83■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Tmem241Q3UME2 297 aa17.83■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Mrps11Q9DCA2 191 aaKnown RBP17.83■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Vmn1r54Q9EPB8 315 aa17.83■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 C1ql4Q4ZJM9 238 aa17.83■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Olfr779E9PUS9 130 aa17.82■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Lcn2P11672 200 aa17.82■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Rchy1Q9CR50 261 aa17.82■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Carhsp1Q9CR86 148 aa17.82■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Dock8Q8C147 2100 aa17.82■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Foxf2O54743 446 aa17.82■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Sdr39u1Q5M8N4 308 aa17.82■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Tmem167aQ9CR64 72 aa17.82■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Avpi1Q9D7H4 142 aa17.82■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Cox6b1P56391 86 aaKnown RBP17.82■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Gpx7Q99LJ6 186 aa17.82■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Ighv1-26A0A075B5V0 117 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 ElnP54320 860 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Myo16Q5DU14 1919 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Olfr748E9Q9Z0 307 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Ube2d2bQ6ZWY6 147 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Gm45717A0A1B0GT68 152 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Lgals6O54891 301 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 TcraP01849 138 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Ormdl2Q9CQZ0 153 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 HilpdaQ9JLS0 64 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Slc25a15Q9WVD5 301 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Fbln7Q501P1 440 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Gm1553Q66VB7 94 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Gm21616B6ZB74 166 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Mmp23O88676 391 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Gm10762Q9CZN6 115 aa17.81■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Heatr5bQ8C547 2070 aa17.8■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Ucp1P12242 307 aa17.8■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Il3raP26952 396 aa17.8■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 MturnQ8CGA4 131 aa17.8■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Tmem89Q9DA04 169 aa17.8■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Trav7n-4A0A075B620 113 aa17.8■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 3110082J24RikF6Z6Z2 108 aa17.8■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Atp5iQ06185 71 aaKnown RBP17.8■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Nhlrc1Q8BR37 401 aa17.8■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 F11rO88792 300 aa17.8■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Q4KKZ1 196 aa17.8■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Trav19A0A0B4J1K4 119 aa17.79■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Loxhd1C8YR32 2068 aa17.79■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 A0A1Y7VMQ4 148 aa17.79■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Cpsf4lE9Q2N0 280 aa17.79■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Crybb3Q9JJU9 211 aa17.79■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 P01726 129 aa17.79■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Cmc4Q61908 68 aa17.79■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Trav3n-3A0A0G2JEM0 114 aa17.79■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Ms4a12A0A087WSB9 263 aa17.79■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Saa3P04918 122 aa17.79■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Spock3Q8BKV0 436 aa17.79■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Otx1P80205 355 aa17.78■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Ccl12Q62401 104 aa17.78■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 NdpP48744 131 aa17.78■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Vdac2Q60930 295 aaKnown RBP17.78■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Supt4h1aP63271 117 aa17.78■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 UngP97931 306 aa17.78■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Ighv1-81A0A075B5Y4 117 aa17.77■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Igkv13-85A0A075B666 115 aa17.77■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Zfp36P22893 319 aaKnown RBP17.77■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Timp3P39876 211 aa17.77■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Vopp1Q8R1C3 172 aa17.77■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Pgpep1Q9ESW8 209 aa17.77■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Hist1h2bmP10854 126 aa17.77■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Wnt2P21552 360 aa17.77■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Hist1h2bhQ64478 126 aa17.77■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Hist2h2bbQ64525 126 aa17.77■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Hist1h2bcQ6ZWY9 126 aaKnown RBP17.77■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Cdcp2Q8BQH6 427 aa17.77■□□□□ 0.44
Smarcc1-201ENSMUST00000088716 Igkv13-84A0A140T8N3 115 aa17.77■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Igkv4-51A0N8I8 119 aa17.77■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 SbpP15501 199 aa17.77■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Usmg5Q78IK2 58 aa17.77■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Iba57Q8CAK1 358 aaKnown RBP17.77■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 CompQ9R0G6 755 aa17.77■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 1700084M14RikB1AT01 78 aa17.77■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Rnf217D3YYI7 515 aa17.77■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Bak1O08734 209 aa17.77■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Q91WE4 72 aa17.77■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Tac4Q99N14 128 aa17.76■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Fbln5Q9WVH9 448 aa17.76■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Gm20458E9PXJ7 78 aa17.76■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Spink1P09036 80 aa17.76■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Dph3Q8K0W9 82 aa17.76■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Zfhx2Q2MHN3 2562 aa17.76■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Klf14Q19A41 325 aa17.76■□□□□ 0.43
Smarcc1-201ENSMUST00000088716 Olfr1381Q7TQT4 311 aa17.76■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms