RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Uqcrfs1Q9CR68 274 aa8.42□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Awat1A2ADU9 328 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Gm20379A0A087WR34 119 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 H2al2bA9Z055 111 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Spint5J3KMK8 105 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Scgb1b2O35176 93 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Tdgf1P51865 171 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Gm12888Q3UW77 119 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Defa20Q45VN2 95 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Foxs1Q61574 329 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Hspe1Q64433 102 aaKnown RBP8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Zfp420Q7TMN8 578 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 GalmQ8K157 342 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Iglv3A0A0B4J1K5 122 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Klk10Q99M20 278 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Trdv1A0A075B657 112 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Defa-rs12P50716 91 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Olfr1381Q7TQT4 311 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Iah1Q9DB29 249 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Tmem141A2AJB2 108 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 TgfaP48030 159 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 MycbQ6P8Z1 170 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Scn5aQ9JJV9 2019 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Gm13090A2A899 111 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Jsrp1Q3MI48 332 aa8.41□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Igkv9-123A0A140T8N8 117 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Efna2P52801 209 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Foxl1Q64731 336 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Spink2Q8BMY7 86 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Mzt1Q8BUR9 78 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Gm10306Q9CUK2 115 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Gm6793B2RXM2 351 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Vmn1r216Q8R257 298 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 OtorQ9JIE3 128 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Smr2O09133 150 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Ca2P00920 260 aaKnown RBP8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 SbpP15501 199 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Dmrt3Q80WT2 476 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Fbxo46Q8BG80 603 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 D730048I06RikQ9CQB8 106 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Ssbp2Q9CYZ8 361 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 Dctn5Q9QZB9 182 aa8.4□□□□□ -1.06
Ubr1-201ENSMUST00000028728 PigyP0C1P0 71 aa8.4□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Ca5aP23589 299 aa8.4□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Hist1h1tQ07133 208 aa8.4□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Olfr322Q5NCC8 327 aa8.4□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Lhfpl1Q80SV1 220 aa8.4□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Ndufc2Q9CQ54 120 aa8.4□□□□□ -1.07
Ubr1-201ENSMUST00000028728 OtofQ9ESF1 1997 aa8.4□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Rnf182Q8C432 247 aa8.4□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Mob3bQ8VE04 216 aa8.4□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Cabin1G3X8Q1 2187 aaKnown RBP8.4□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Trav7-5A0A0G2JFX6 112 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Nat8b-psE0CYC6 232 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 P18528 98 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Plscr4P58196 326 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Mob4Q6PEB6 225 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Tm2d3Q8BJ83 261 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Gm28269A0A087WSG3 125 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Ighv8-6A0A0A6YXA3 118 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 TcraP01849 138 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Q8VC23 124 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Morn2Q6UL01 79 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Lhx2Q9Z0S2 406 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Cacna1aP97445 2368 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Ighv1-18A0A0A6YXN4 117 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Gm45521A0A1B0GRK0 198 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Wbp1P97764 304 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Trav7n-5A0A075B604 112 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Trav8-1A0A075B641 109 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Foxf2O54743 446 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Csrp2P97314 193 aaKnown RBP8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Prima1Q810F0 153 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Znf146Q8BQN6 292 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Tmem91Q8C581 172 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 PifoQ9D9W1 207 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 CklfQ9DAS1 152 aa8.39□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Tmem238A9JSM3 176 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Gm12169F2Z474 250 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Ralgapa1Q6GYP7 2035 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Ighv5-9A0A075B5Q2 117 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Ighv1-62-2A0A0A6YXZ4 119 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Trav19A0A0B4J1K4 119 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Znf260Q62513 407 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Snrnp200Q6P4T2 2136 aaKnown RBP8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Iba57Q8CAK1 358 aaKnown RBP8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Sh2d6Q9D413 297 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Scn10aQ6QIY3 1958 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Sumo2P61957 95 aaKnown RBP8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Cd33Q63994 403 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Hapln4Q80WM4 400 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Hs3st3b1Q9QZS6 390 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Trav14n-3A0A075B645 120 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Sigmar1O55242 223 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Vdac2Q60930 295 aaKnown RBP8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Mgst3Q9CPU4 153 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Obox1Q9D350 204 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Zdhhc16Q9ESG8 361 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Crim1Q9JLL0 1037 aa8.38□□□□□ -1.07
Ubr1-201ENSMUST00000028728 Myo16Q5DU14 1919 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms