RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Il22ra1Q80XZ4 581 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 9930022D16RikQ8BG27 128 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Spsb4Q8R5B6 273 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Olfr33Q8VGX7 318 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Olfr961Q9EQ84 314 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Ighv9-4A0A0A6YWH6 117 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Ighv9-3A0A0B4J1J5 117 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Ighv9-1A0A0B4J1P3 117 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Smim13E9Q942 88 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Efnb3O35393 340 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Cxcl13O55038 109 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Pax1P09084 446 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 F2rl1P55086 399 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Dynlt3P56387 116 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Htr1dQ61224 374 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Ifna11Q61716 190 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Trbv19A0A0B4J1H4 117 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 P04212 136 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 P04945 108 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Smim6Q3U0I6 56 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Ube2d2bQ6ZWY6 147 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Vmn1r202Q8R259 302 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Olfr976Q8VF15 326 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Olfr484Q8VFD3 321 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 EsdQ9R0P3 282 aa7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 HelzQ6DFV5 1964 aaKnown RBP7.8□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Foxh1O88621 401 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Cd81P35762 236 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Pcp4P63054 62 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Nkx3-1P97436 237 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Shisa6Q3UH99 525 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Tmprss12Q3V0Q7 336 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Duxbl2Q7TNE6 350 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 CrhQ8CIT0 187 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Tmprss5Q9ER04 455 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Cd200r1Q9ES57 326 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Fhl3Q9R059 289 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Esp4A8R0T8 117 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Gm10073E9Q3T0 114 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Dnajc30P59041 219 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Zic4Q61467 341 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Dlx1Q64317 255 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Spaca3Q9D9X8 221 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Igkv5-37A0A140T8N4 115 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Scgb1b19F6WYW0 93 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Ins2P01326 110 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Zfp27P10077 819 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Spint3Q3UW09 88 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 C1qtnf9Q4ZJN1 333 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Wdr31Q9JHB4 367 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Ccpg1osV9GXK1 122 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Ighv1-67A0A0G2JFN9 117 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Dkk1O54908 272 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 P01723 117 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 C1ql4Q4ZJM9 238 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Immp2lQ8BPT6 175 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Cml3Q9JIY8 226 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 F5O88783 2183 aa7.79□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Olfr1369-ps1A0A140T8K7 317 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Gm6970F7DCP6 221 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Defa3P28310 93 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Defa10P50708 93 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Defa15P50713 93 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Prrx2Q06348 247 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 9430097D07RikQ8BS47 195 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Q9CX63 252 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 AmtnQ9D3J8 213 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Tcl1b2P56841 117 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Pax8Q00288 457 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Srd5a2Q99N99 254 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Bpifa5Q9CQX3 270 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Tnfrsf13cQ9D8D0 175 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Trbv12-2A0A0B4J1H1 124 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Gm45623A0A1B0GSF6 103 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Cypt3B1AY64 174 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Tex54G3UW99 86 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 B020031M17RikQ3UT11 173 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Trav15-1-dv6-1Q5R1D2 117 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Gm10306Q9CUK2 115 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 EppinQ9DA01 134 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 1700008P02RikQ9DAJ8 175 aa7.78□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Gm21900J3QP38 180 aa7.77□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Klk1b22P15948 259 aa7.77□□□□□ -1.16
Ldlr-202ENSMUST00000213114 P18526 117 aa7.77□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Ca5aP23589 299 aa7.77□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Il3raP26952 396 aa7.77□□□□□ -1.16
Ldlr-202ENSMUST00000213114 AsipQ03288 131 aa7.77□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Mbd6Q3TY92 1003 aa7.77□□□□□ -1.16
Ldlr-202ENSMUST00000213114 EpopQ7TNS8 369 aa7.77□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Cox19Q8K0C8 92 aa7.77□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Olfr1441Q8VFV3 318 aa7.77□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Mrpl20Q9CQL4 149 aa7.77□□□□□ -1.16
Ldlr-202ENSMUST00000213114 Myo9aQ8C170 2542 aa7.77□□□□□ -1.17
Ldlr-202ENSMUST00000213114 Heatr5aQ5PRF0 2038 aa7.77□□□□□ -1.17
Ldlr-202ENSMUST00000213114 Igkv6-15A0A140T8M5 115 aa7.77□□□□□ -1.17
Ldlr-202ENSMUST00000213114 Tnfrsf9P20334 256 aa7.77□□□□□ -1.17
Ldlr-202ENSMUST00000213114 Mfge8P21956 463 aaKnown RBP7.77□□□□□ -1.17
Ldlr-202ENSMUST00000213114 Cdkn1aP39689 159 aa7.77□□□□□ -1.17
Ldlr-202ENSMUST00000213114 Srrm4Q8BKA3 608 aa7.77□□□□□ -1.17
Ldlr-202ENSMUST00000213114 Olfr954Q9EQB6 314 aa7.77□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms