RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Rab33bO35963 229 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Loxl1P97873 607 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Ifna11Q61716 190 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr1419Q7TQS2 343 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Rbfox2Q8BP71 449 aaKnown RBP10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Zmat4Q8BZ94 229 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr123Q8VFQ1 309 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Tcf20Q9EPQ8 1987 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gm21900J3QP38 180 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gm15292L7N231 93 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Klf12O35738 402 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr1453Q8VFX0 307 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Lurap1Q9D6I9 239 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Ms4a12A0A087WSB9 263 aa10.88□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr869E9PX82 323 aa10.88□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gm21974F6W3F3 119 aa10.88□□□□□ -0.67
Nup88-201ENSMUST00000035283 Folr2Q05685 251 aa10.88□□□□□ -0.67
Nup88-201ENSMUST00000035283 Tbr1Q64336 681 aa10.88□□□□□ -0.67
Nup88-201ENSMUST00000035283 Znf641Q8BZ34 422 aa10.88□□□□□ -0.67
Nup88-201ENSMUST00000035283 Trib1Q8K4K4 372 aa10.88□□□□□ -0.67
Nup88-201ENSMUST00000035283 Lamp5Q9D387 280 aa10.88□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr954Q9EQB6 314 aa10.88□□□□□ -0.67
Nup88-201ENSMUST00000035283 Trav12-3A0A075B648 115 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 Ccl2P10148 148 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 Hoxb4P10284 250 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 Cox6a1P43024 111 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 Tff3Q62395 81 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 H2-M10.4Q85ZW8 331 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr303Q8VFP0 319 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 Slc25a15Q9WVD5 301 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 P04946 108 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 Atp6v0cP63082 155 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 Fxyd3Q61835 88 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 Cd33Q63994 403 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr491Q8VG06 310 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 Ap5s1Q9D742 170 aa10.87□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gm13030A2APQ6 143 aa10.86□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gm21913J3KML9 361 aa10.86□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gm21776J3QPJ5 361 aa10.86□□□□□ -0.67
Nup88-201ENSMUST00000035283 P04942 107 aa10.86□□□□□ -0.67
Nup88-201ENSMUST00000035283 Hoxa1P09022 331 aa10.86□□□□□ -0.67
Nup88-201ENSMUST00000035283 Dynlrb1P62627 96 aa10.86□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr1434Q7TQR9 312 aa10.86□□□□□ -0.67
Nup88-201ENSMUST00000035283 P18525 117 aa10.86□□□□□ -0.67
Nup88-201ENSMUST00000035283 Ube2g1P62254 170 aa10.86□□□□□ -0.67
Nup88-201ENSMUST00000035283 RhodP97348 210 aa10.86□□□□□ -0.67
Nup88-201ENSMUST00000035283 Ifna12Q80SS5 189 aa10.86□□□□□ -0.67
Nup88-201ENSMUST00000035283 Col13a1Q9R1N9 751 aa10.86□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gm21060J3KMU4 56 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Cldn1O88551 211 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 P18529 117 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 P18530 117 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 HrkP62816 92 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr996Q7TRA0 314 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gm11733Q8BQP1 125 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gucd1Q8BZI6 239 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Cldn16Q925N4 235 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Hcfc2Q9D968 241 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 1700008P02RikQ9DAJ8 175 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Smg1Q8BKX6 3658 aaKnown RBP10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Ighv8-6A0A0A6YXA3 118 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Trav23A0A0G2JG17 115 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Zfp979A2A799 407 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Tarm1B6A8R8 288 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 StumQ0VBF8 141 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 AY761185Q5ERI8 94 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Dlx1Q64317 255 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Tnfsf18Q7TS55 173 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Ss18l1Q8BW22 402 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Nit1Q8VDK1 323 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr477Q8VGI6 310 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Vps25Q9CQ80 176 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gab2Q9Z1S8 665 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 DysfQ9ESD7 2090 aa10.85□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gm3072F6SKY8 209 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr1535Q7TQU0 326 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gm9945Q8BNZ3 91 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr1402Q8VET1 320 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr1272Q8VGN8 308 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Ly96Q9JHF9 160 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Klf13Q9JJZ6 289 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Trav14n-3A0A075B645 120 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 9830107B12RikD3Z5D6 160 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 P01736 120 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 MgpP19788 104 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Tac3P55099 116 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Rbx1P62878 108 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Pex7P97865 318 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Q08AU9 97 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Ifna14Q810G3 189 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Zfp874aQ8BX23 447 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Rln3Q8CHK2 141 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Siglec12Q91Y57 467 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Rnf7Q9WTZ1 113 aa10.84□□□□□ -0.67
Nup88-201ENSMUST00000035283 Scgb1b11A0A087WQJ0 93 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Gm36368A0A1D5RLK8 91 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Awat1A2ADU9 328 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Zcchc24B2RVL6 241 aaKnown RBP10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 eef1akmt3D3YWP0 232 aa10.83□□□□□ -0.68
Nup88-201ENSMUST00000035283 Rbp4Q00724 201 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms