RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Gm45871A0A1B0GRI9 540 aa19.3■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Spint3Q3UW09 88 aa19.3■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Fam19a2Q7TPG7 131 aa19.3■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Trav16d-dv11A0A075B617 117 aa19.29■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Gm17727E9Q4V7 109 aa19.29■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Polr3kQ9CQZ7 108 aa19.29■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Gm10912Q3UXH0 145 aa19.29■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 3100002H09RikQ9CXW6 140 aa19.29■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Rnase2aQ8K196 155 aa19.29■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Gm35549A0A0N4SUS7 141 aa19.29■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Ss18Q62280 418 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Morn3Q8C5T4 241 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Gm11444F6QMA6 170 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Cd69P37217 199 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Cks1bP61025 79 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Ubald2Q8BQH4 164 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Iba57Q8CAK1 358 aaKnown RBP19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Olfr1323Q8VF35 309 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Tspoap1Q7TNF8 1846 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Gm42957D6RFQ2 366 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Znf664Q4VA44 261 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Morn2Q6UL01 79 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Dmrt3Q80WT2 476 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Prss28Q924N9 274 aa19.28■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Ms4a12A0A087WSB9 263 aa19.27■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Gm7849D3YX03 116 aa19.27■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 Foxh1O88621 401 aa19.27■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 LenepQ9WVB6 61 aa19.27■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 TcraP01849 138 aa19.27■□□□□ 0.68
Sh3rf1-201ENSMUST00000034060 SeboxP70368 190 aa19.27■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 RhogP84096 191 aa19.27■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Crybb3Q9JJU9 211 aa19.27■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Siglec15A7E1W8 342 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Cox8bP48772 70 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Plpp2Q9DAX2 276 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Hint1P70349 126 aaKnown RBP19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Dmrtc2Q8CGW9 370 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Mogat1Q91ZV4 335 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Itgb1bp1O35671 200 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 BC049762Q8C601 163 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Nat6Q9R123 314 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Ighv1-76A0A0G2JFE9 117 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 F11rO88792 300 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Pax9P47242 342 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Q8VC23 124 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 HilpdaQ9JLS0 64 aa19.26■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Gm9944Q8C559 102 aa19.25■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Iglv3A0A0B4J1K5 122 aa19.25■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Igkv14-100A0A0G2JG36 117 aa19.25■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Slc25a47Q6IS41 310 aa19.25■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Gm4894Q8CA09 118 aa19.25■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 ApohQ01339 345 aa19.25■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Gpr82Q8BZR0 328 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Tmem129Q8K304 362 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Tex48Q9DA81 110 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Phpt1Q9DAK9 124 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Defb6Q91VD6 63 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Tmem238A9JSM3 176 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Il3raP26952 396 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Shank3Q4ACU6 1730 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Gbf1Q6DFZ1 1861 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Ighv7-2A0A0A6YX91 119 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Rnf5O35445 180 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Iglc2P01844 104 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Dctn5Q9QZB9 182 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Slc25a15Q9WVD5 301 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Klk4Q9Z0M1 255 aa19.24■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Defa28D3Z1V9 94 aa19.23■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Defa25Q5G864 92 aa19.23■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Gtsf1lQ9CWD0 151 aa19.23■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Gm36368A0A1D5RLK8 91 aa19.23■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 P01783 136 aa19.23■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 LtaP09225 202 aa19.23■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Trdv1A0A075B657 112 aa19.23■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 CrygsO35486 178 aa19.23■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Lrrc25Q8K1T1 297 aa19.23■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Pth2Q91W27 100 aa19.23■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Tm4sf20Q9CQY8 226 aa19.23■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Tex36Q9D5N9 219 aa19.23■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Taf1Q80UV9 1891 aa19.22■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Ssbp2Q9CYZ8 361 aa19.22■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Slc25a39Q9D8K8 359 aa19.22■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 PikfyveQ9Z1T6 2097 aa19.22■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Nhlrc1Q8BR37 401 aa19.22■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Ss18l1Q8BW22 402 aa19.22■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Klk7Q91VE3 249 aa19.22■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Lyzl1Q9CPX3 148 aa19.22■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Ccl17F6R5P4 103 aa19.22■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Defa4P28311 92 aa19.22■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 RflnaQ7TS73 204 aa19.22■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Znf319Q9ERR8 581 aa19.22■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Igkv6-14A0A140T8P1 115 aa19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Gm6793B2RXM2 351 aa19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Loxl2P58022 776 aa19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Srsf6Q3TWW8 339 aaKnown RBP19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Mrpl36Q99N90 102 aa19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Trav19A0A0B4J1K4 119 aa19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 AY761184Q9D848 116 aa19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Pgpep1Q9ESW8 209 aa19.21■□□□□ 0.67
Sh3rf1-201ENSMUST00000034060 Fxyd1Q9Z239 92 aa19.21■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 68.7 ms