RNA–Protein interactions for RNA: snR61

snR61, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR61, Length 90 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR61	snR61	MNN2	P38069	597 aa		0.72	□□□□□ -2.29
snR61	snR61	USA1	Q03714	838 aa		0.72	□□□□□ -2.29
snR61	snR61	RAD33	Q04231	177 aa		0.72	□□□□□ -2.29
snR61	snR61	APL5	Q08951	932 aa	Known RBP	0.72	□□□□□ -2.29
snR61	snR61	OSH2	Q12451	1283 aa		0.72	□□□□□ -2.29
snR61	snR61	YDL012C	Q12489	107 aa		0.72	□□□□□ -2.29
snR61	snR61	IMG2	P25642	146 aa	Predicted RBP	0.71	□□□□□ -2.3
snR61	snR61	NIC96	P34077	839 aa		0.71	□□□□□ -2.3
snR61	snR61	CRG1	P38892	291 aa	RIP-Chip data	0.71	□□□□□ -2.3	not detected
snR61	snR61	VAC8	P39968	578 aa		0.71	□□□□□ -2.3
snR61	snR61	NUG1	P40010	520 aa	Known RBP	0.71	□□□□□ -2.3
snR61	snR61	RAD26	P40352	1085 aa		0.71	□□□□□ -2.3
snR61	snR61	YJR039W	P47107	1121 aa		0.71	□□□□□ -2.3
snR61	snR61	BOR1	P53838	576 aa		0.71	□□□□□ -2.3
snR61	snR61	YNL058C	P53947	316 aa		0.71	□□□□□ -2.3
snR61	snR61	SNP1	Q00916	300 aa	Predicted RBP	0.71	□□□□□ -2.3
snR61	snR61	YOR389W	Q08912	624 aa		0.71	□□□□□ -2.3
snR61	snR61	CIT2	P08679	460 aa		0.7	□□□□□ -2.3
snR61	snR61	YPK1	P12688	680 aa	Known RBP	0.7	□□□□□ -2.3
snR61	snR61	PDA1	P16387	420 aa	Known RBP	0.7	□□□□□ -2.3
snR61	snR61	IME1	P21190	360 aa		0.7	□□□□□ -2.3
snR61	snR61	GRX1	P25373	110 aa	Known RBP	0.7	□□□□□ -2.3
snR61	snR61	BUD14	P27637	709 aa		0.7	□□□□□ -2.3
snR61	snR61	SRO77	P38163	1010 aa		0.7	□□□□□ -2.3
snR61	snR61	FTR1	P40088	404 aa		0.7	□□□□□ -2.3
snR61	snR61	PRE5	P40302	234 aa	Known RBP	0.7	□□□□□ -2.3
snR61	snR61	BUD8	P41698	603 aa		0.7	□□□□□ -2.3
snR61	snR61	YPI1	P43587	155 aa		0.7	□□□□□ -2.3
snR61	snR61	ALD6	P54115	500 aa	Known RBP	0.7	□□□□□ -2.3
snR61	snR61	NHX1	Q04121	633 aa		0.7	□□□□□ -2.3
snR61	snR61	CRT10	Q08226	957 aa		0.7	□□□□□ -2.3
snR61	snR61	RTC1	Q08281	1341 aa		0.69	□□□□□ -2.3
snR61	snR61	SOD1	P00445	154 aa	Known RBP	0.69	□□□□□ -2.3
snR61	snR61	PCK1	P10963	549 aa		0.69	□□□□□ -2.3
snR61	snR61	HNM1	P19807	563 aa		0.69	□□□□□ -2.3
snR61	snR61	STO1	P34160	861 aa	Known RBP	0.69	□□□□□ -2.3
snR61	snR61	ERV46	P39727	415 aa		0.69	□□□□□ -2.3
snR61	snR61	YEL025C	P39991	1188 aa		0.69	□□□□□ -2.3
snR61	snR61	ASG1	P40467	964 aa		0.69	□□□□□ -2.3
snR61	snR61	PXA1	P41909	870 aa		0.69	□□□□□ -2.3
snR61	snR61	YJL107C	P42947	387 aa		0.69	□□□□□ -2.3
snR61	snR61	RTA1	P53047	317 aa		0.69	□□□□□ -2.3
snR61	snR61	GPD1	Q00055	391 aa	Known RBP	0.69	□□□□□ -2.3
snR61	snR61	IZH1	Q03419	316 aa		0.69	□□□□□ -2.3
snR61	snR61	GDA1	P32621	518 aa		0.68	□□□□□ -2.3
snR61	snR61	EFM2	P38347	419 aa		0.68	□□□□□ -2.3
snR61	snR61	CAF16	P43569	289 aa		0.68	□□□□□ -2.3
snR61	snR61	PSP1	P50896	841 aa	Known RBP	0.68	□□□□□ -2.3
snR61	snR61	JIP5	Q06214	492 aa	Predicted RBP	0.68	□□□□□ -2.3
snR61	snR61	DAP1	Q12091	152 aa		0.68	□□□□□ -2.3
snR61	snR61	LYS21	Q12122	440 aa	Known RBP	0.68	□□□□□ -2.3
snR61	snR61	YLL056C	Q12177	298 aa		0.68	□□□□□ -2.3
snR61	snR61	CDS1	P38221	457 aa		0.67	□□□□□ -2.3
snR61	snR61	CIR1	P42940	261 aa		0.67	□□□□□ -2.3
snR61	snR61	YGR125W	P53273	1036 aa		0.67	□□□□□ -2.3
snR61	snR61	YNL092W	P53934	400 aa		0.67	□□□□□ -2.3
snR61	snR61	ACS1	Q01574	713 aa		0.67	□□□□□ -2.3
snR61	snR61	YMR254C	Q04838	102 aa		0.67	□□□□□ -2.3
snR61	snR61	ARR3	Q06598	404 aa		0.67	□□□□□ -2.3
snR61	snR61	PPT2	Q12036	173 aa		0.67	□□□□□ -2.3
snR61	snR61	DCS2	Q12123	353 aa		0.67	□□□□□ -2.3
snR61	snR61	YLR112W	Q12130	139 aa		0.67	□□□□□ -2.3
snR61	snR61	NAT1	P12945	854 aa	Known RBP	0.66	□□□□□ -2.3
snR61	snR61	PRE4	P30657	266 aa		0.66	□□□□□ -2.3
snR61	snR61	YKU70	P32807	602 aa		0.66	□□□□□ -2.3
snR61	snR61	BEM4	P39011	633 aa		0.66	□□□□□ -2.3
snR61	snR61	SMK1	P41808	388 aa		0.66	□□□□□ -2.3
snR61	snR61	GSM1	P42950	618 aa		0.66	□□□□□ -2.3
snR61	snR61	MAL11	P53048	616 aa		0.66	□□□□□ -2.3
snR61	snR61	ESBP6	P53918	673 aa		0.66	□□□□□ -2.3
snR61	snR61	HLR1	Q04429	423 aa		0.66	□□□□□ -2.3
snR61	snR61	COG8	Q04632	607 aa		0.66	□□□□□ -2.3
snR61	snR61	RAD34	Q06665	692 aa		0.66	□□□□□ -2.3
snR61	snR61	RPS2	P25443	254 aa	Known RBP	0.65	□□□□□ -2.31
snR61	snR61	KES1	P35844	434 aa	Known RBP	0.65	□□□□□ -2.31
snR61	snR61	EHT1	P38295	451 aa		0.65	□□□□□ -2.31
snR61	snR61	YJR061W	P40355	935 aa		0.65	□□□□□ -2.31
snR61	snR61	MTD1	Q02046	320 aa	Known RBP	0.65	□□□□□ -2.31
snR61	snR61	RNY1	Q02933	434 aa	Known RBP	0.65	□□□□□ -2.31
snR61	snR61	ARP9	Q05123	467 aa		0.65	□□□□□ -2.31
snR61	snR61	CDC9	P04819	755 aa		0.64	□□□□□ -2.31
snR61	snR61	GLN4	P13188	809 aa	Known RBP	0.64	□□□□□ -2.31
snR61	snR61	RAD4	P14736	754 aa		0.64	□□□□□ -2.31
snR61	snR61	RRP43	P25359	394 aa	Predicted RBP	0.64	□□□□□ -2.31
snR61	snR61	HOG1	P32485	435 aa		0.64	□□□□□ -2.31
snR61	snR61	LRO1	P40345	661 aa		0.64	□□□□□ -2.31
snR61	snR61	VPS25	P47142	202 aa		0.64	□□□□□ -2.31
snR61	snR61	YMR210W	Q03649	449 aa		0.64	□□□□□ -2.31
snR61	snR61	DIN7	Q12086	430 aa		0.64	□□□□□ -2.31
snR61	snR61	SFP1	P32432	683 aa		0.63	□□□□□ -2.31
snR61	snR61	ARN1	P38731	627 aa		0.63	□□□□□ -2.31
snR61	snR61	ATG27	P46989	271 aa		0.63	□□□□□ -2.31
snR61	snR61	ORC5	P50874	479 aa		0.63	□□□□□ -2.31
snR61	snR61	PPN1	Q04119	674 aa		0.63	□□□□□ -2.31
snR61	snR61	YLR407W	Q06070	228 aa		0.63	□□□□□ -2.31
snR61	snR61	BAR1	P12630	587 aa		0.62	□□□□□ -2.31
snR61	snR61	GAL11	P19659	1081 aa		0.62	□□□□□ -2.31
snR61	snR61	RAD24	P32641	659 aa		0.62	□□□□□ -2.31
snR61	snR61	PBP2	P38151	413 aa	Known RBP RIP-Chip data	0.62	□□□□□ -2.31	not detected
snR61	snR61	DOT6	P40059	670 aa	Known RBP	0.62	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms