RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C YDR341CQ05506 607 aaKnown RBP2.39□□□□□ -2.03
ATG11YPR049C HSP42Q12329 375 aa2.39□□□□□ -2.03
ATG11YPR049C YGR161W-CQ3E744 92 aa2.39□□□□□ -2.03
ATG11YPR049C RER2P35196 286 aa2.38□□□□□ -2.03
ATG11YPR049C VBA5P36172 582 aa2.38□□□□□ -2.03
ATG11YPR049C CHS6P40955 746 aa2.38□□□□□ -2.03
ATG11YPR049C IES1P43579 692 aa2.38□□□□□ -2.03
ATG11YPR049C VPS25P47142 202 aa2.38□□□□□ -2.03
ATG11YPR049C MRX6P48564 524 aa2.38□□□□□ -2.03
ATG11YPR049C ALT2P52892 507 aa2.38□□□□□ -2.03
ATG11YPR049C SPC98P53540 846 aa2.38□□□□□ -2.03
ATG11YPR049C RKM2Q03942 479 aa2.38□□□□□ -2.03
ATG11YPR049C ACM1Q08981 209 aa2.38□□□□□ -2.03
ATG11YPR049C GPR1Q12361 961 aa2.38□□□□□ -2.03
ATG11YPR049C ACC1Q00955 2233 aaKnown RBP2.38□□□□□ -2.03
ATG11YPR049C GAL10P04397 699 aa2.38□□□□□ -2.03
ATG11YPR049C CDC43P18898 376 aa2.38□□□□□ -2.03
ATG11YPR049C SIF2P38262 535 aa2.38□□□□□ -2.03
ATG11YPR049C YBR238CP38330 731 aaKnown RBP2.38□□□□□ -2.03
ATG11YPR049C CRP1P38845 465 aaKnown RBP2.38□□□□□ -2.03
ATG11YPR049C OSW5P40219 148 aa2.38□□□□□ -2.03
ATG11YPR049C ENP2P48234 707 aaKnown RBP2.38□□□□□ -2.03
ATG11YPR049C YNL146WP53906 100 aa2.38□□□□□ -2.03
ATG11YPR049C AAT1Q01802 451 aa2.38□□□□□ -2.03
ATG11YPR049C RCR2Q03446 210 aaKnown RBP2.38□□□□□ -2.03
ATG11YPR049C FMP25Q08023 583 aa2.38□□□□□ -2.03
ATG11YPR049C RIM11P38615 370 aa2.38□□□□□ -2.03
ATG11YPR049C SPT8P38915 602 aa2.38□□□□□ -2.03
ATG11YPR049C SEC26P41810 973 aaKnown RBP2.38□□□□□ -2.03
ATG11YPR049C THI6P41835 540 aa2.38□□□□□ -2.03
ATG11YPR049C SHE10P53075 577 aa2.38□□□□□ -2.03
ATG11YPR049C RTS3P53289 263 aa2.38□□□□□ -2.03
ATG11YPR049C MRD1Q06106 887 aaKnown RBP2.38□□□□□ -2.03
ATG11YPR049C ESC2Q06340 456 aa2.38□□□□□ -2.03
ATG11YPR049C LEA1Q08963 238 aaPredicted RBP2.38□□□□□ -2.03
ATG11YPR049C PUB1P32588 453 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
ATG11YPR049C CSE2P33308 149 aa2.37□□□□□ -2.03
ATG11YPR049C YNG2P38806 282 aaKnown RBP2.37□□□□□ -2.03
ATG11YPR049C BTT1P40314 149 aaPredicted RBP2.37□□□□□ -2.03
ATG11YPR049C NUP82P40368 713 aa2.37□□□□□ -2.03
ATG11YPR049C DAS1P47005 663 aa2.37□□□□□ -2.03
ATG11YPR049C VPS16Q03308 798 aa2.37□□□□□ -2.03
ATG11YPR049C YKL151CP36059 337 aa2.37□□□□□ -2.03
ATG11YPR049C SRX1P36077 127 aa2.37□□□□□ -2.03
ATG11YPR049C ECM13P38195 257 aa2.37□□□□□ -2.03
ATG11YPR049C PCA1P38360 1216 aa2.37□□□□□ -2.03
ATG11YPR049C ERV46P39727 415 aa2.37□□□□□ -2.03
ATG11YPR049C NOP13P53883 403 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
ATG11YPR049C CDC45Q08032 650 aa2.37□□□□□ -2.03
ATG11YPR049C SMC5Q08204 1093 aa2.37□□□□□ -2.03
ATG11YPR049C GPB1Q08886 897 aa2.37□□□□□ -2.03
ATG11YPR049C CTF3Q12748 733 aa2.37□□□□□ -2.03
ATG11YPR049C PHO8P11491 566 aa2.37□□□□□ -2.03
ATG11YPR049C STI1P15705 589 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
ATG11YPR049C CCR4P31384 837 aaKnown RBP2.37□□□□□ -2.03
ATG11YPR049C TSA1P34760 196 aaKnown RBP2.37□□□□□ -2.03
ATG11YPR049C PIC2P40035 300 aa2.37□□□□□ -2.03
ATG11YPR049C YFL066CP43538 392 aa2.37□□□□□ -2.03
ATG11YPR049C POB3Q04636 552 aaKnown RBP2.37□□□□□ -2.03
ATG11YPR049C YOL024WQ08172 172 aa2.37□□□□□ -2.03
ATG11YPR049C CLN3P13365 580 aa2.36□□□□□ -2.03
ATG11YPR049C RPL8AP17076 256 aaKnown RBP2.36□□□□□ -2.03
ATG11YPR049C HEL1P36113 551 aa2.36□□□□□ -2.03
ATG11YPR049C ATG12P38316 186 aa2.36□□□□□ -2.03
ATG11YPR049C SAK1P38990 1142 aa2.36□□□□□ -2.03
ATG11YPR049C STU2P46675 888 aa2.36□□□□□ -2.03
ATG11YPR049C BIR1P47134 954 aa2.36□□□□□ -2.03
ATG11YPR049C CCM1P48237 864 aaPredicted RBP2.36□□□□□ -2.03
ATG11YPR049C UTP8P53276 713 aaKnown RBP2.36□□□□□ -2.03
ATG11YPR049C MRPL22P53881 309 aa2.36□□□□□ -2.03
ATG11YPR049C HER2Q03557 464 aa2.36□□□□□ -2.03
ATG11YPR049C HEL2Q05580 639 aaKnown RBP2.36□□□□□ -2.03
ATG11YPR049C ECM22Q05958 814 aaPredicted RBP2.36□□□□□ -2.03
ATG11YPR049C REH1Q06709 432 aa2.36□□□□□ -2.03
ATG11YPR049C GIS3Q12418 502 aa2.36□□□□□ -2.03
ATG11YPR049C SIR1P21691 654 aa2.36□□□□□ -2.03
ATG11YPR049C PTI1P39927 425 aaPredicted RBP2.36□□□□□ -2.03
ATG11YPR049C NPY1P53164 384 aa2.36□□□□□ -2.03
ATG11YPR049C CDA2Q06703 312 aa2.36□□□□□ -2.03
ATG11YPR049C CRD1Q07560 283 aa2.36□□□□□ -2.03
ATG11YPR049C XYL2Q07993 356 aa2.36□□□□□ -2.03
ATG11YPR049C DAL7P21826 554 aa2.35□□□□□ -2.03
ATG11YPR049C MIC60P36112 540 aa2.35□□□□□ -2.03
ATG11YPR049C AAP1P37898 856 aaKnown RBP2.35□□□□□ -2.03
ATG11YPR049C MPT5P39016 859 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
ATG11YPR049C YGR153WP48238 217 aa2.35□□□□□ -2.03
ATG11YPR049C YGL036WP53185 909 aaPredicted RBP2.35□□□□□ -2.03
ATG11YPR049C CUL3P53202 744 aa2.35□□□□□ -2.03
ATG11YPR049C RTT102P53330 157 aa2.35□□□□□ -2.03
ATG11YPR049C ESC8Q08119 714 aa2.35□□□□□ -2.03
ATG11YPR049C SWI4P25302 1093 aaKnown RBP2.35□□□□□ -2.03
ATG11YPR049C YSC83P32792 385 aa2.35□□□□□ -2.03
ATG11YPR049C SPC29P33419 253 aa2.35□□□□□ -2.03
ATG11YPR049C EAF5P39995 279 aa2.35□□□□□ -2.03
ATG11YPR049C SDS3P40505 327 aa2.35□□□□□ -2.03
ATG11YPR049C YLR125WQ12138 136 aa2.35□□□□□ -2.03
ATG11YPR049C YOL098CQ12496 1037 aa2.35□□□□□ -2.03
ATG11YPR049C YOR111WQ99210 232 aa2.35□□□□□ -2.03
ATG11YPR049C CKA2P19454 339 aa2.35□□□□□ -2.03
ATG11YPR049C ACE2P21192 770 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 1741.3 ms