RNA–Protein interactions for RNA: YPR046W

MCM16, Transcript of Component of the Ctf19 complex and the COMA subcomplex, yeast

Gene MCM16, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCM16	YPR046W	SPN1	Q06505	410 aa	Predicted RBP	4.26	□□□□□ -1.73
MCM16	YPR046W	HMI1	Q12039	706 aa		4.26	□□□□□ -1.73
MCM16	YPR046W	NBP2	Q12163	236 aa		4.26	□□□□□ -1.73
MCM16	YPR046W	RVB2	Q12464	471 aa	Known RBP	4.26	□□□□□ -1.73
MCM16	YPR046W	SKM1	Q12469	655 aa		4.26	□□□□□ -1.73
MCM16	YPR046W	HRP1	Q99383	534 aa	Known RBP	4.26	□□□□□ -1.73
MCM16	YPR046W	CTT1	P06115	562 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	TPK1	P06244	397 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	CDC6	P09119	513 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	FUR1	P18562	216 aa	Known RBP	4.25	□□□□□ -1.73
MCM16	YPR046W	EMC1	P25574	760 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	DCG1	P32460	244 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	DHR2	P36009	735 aa	Predicted RBP	4.25	□□□□□ -1.73
MCM16	YPR046W	RKM3	P38222	552 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	CRG1	P38892	291 aa	RIP-Chip data	4.25	□□□□□ -1.73	not detected
MCM16	YPR046W	FTR1	P40088	404 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	SLU7	Q02775	382 aa	Known RBP	4.25	□□□□□ -1.73
MCM16	YPR046W	FCP1	Q03254	732 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	TAF11	Q04226	346 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	YKU80	Q04437	629 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	TMA10	Q06177	86 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	NOP12	Q08208	459 aa	Known RBP	4.25	□□□□□ -1.73
MCM16	YPR046W	TGL5	Q12043	749 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	COX17	Q12287	69 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	ECM3	Q99252	613 aa		4.25	□□□□□ -1.73
MCM16	YPR046W	SWI3	P32591	825 aa		4.24	□□□□□ -1.73
MCM16	YPR046W	YBR225W	P38321	900 aa		4.24	□□□□□ -1.73
MCM16	YPR046W	YJR061W	P40355	935 aa		4.24	□□□□□ -1.73
MCM16	YPR046W	SIP4	P46954	829 aa		4.24	□□□□□ -1.73
MCM16	YPR046W	YPL108W	Q02872	168 aa	Predicted RBP	4.24	□□□□□ -1.73
MCM16	YPR046W	FDC1	Q03034	503 aa		4.24	□□□□□ -1.73
MCM16	YPR046W	TRS31	Q03337	283 aa		4.24	□□□□□ -1.73
MCM16	YPR046W	SYF1	Q04048	859 aa	Predicted RBP	4.24	□□□□□ -1.73
MCM16	YPR046W	SXM1	Q04175	944 aa	Known RBP	4.24	□□□□□ -1.73
MCM16	YPR046W	YLR352W	Q06479	807 aa		4.24	□□□□□ -1.73
MCM16	YPR046W	NPC2	Q12408	173 aa		4.24	□□□□□ -1.73
MCM16	YPR046W	HOM3	P10869	527 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	OPI1	P21957	404 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	SWC3	P31376	625 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	SAC6	P32599	642 aa	Known RBP	4.23	□□□□□ -1.73
MCM16	YPR046W	PXA2	P34230	853 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	LST4	P34239	828 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	COS111	P38308	924 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	GET2	P40056	285 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	IST3	P40565	148 aa	Predicted RBP	4.23	□□□□□ -1.73
MCM16	YPR046W	LYS14	P40971	790 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	ARF3	P40994	183 aa	RIP-Chip data	4.23	□□□□□ -1.73	not detected
MCM16	YPR046W	GPD2	P41911	440 aa	Known RBP	4.23	□□□□□ -1.73
MCM16	YPR046W	ARC1	P46672	376 aa	Known RBP	4.23	□□□□□ -1.73
MCM16	YPR046W	AMA1	P50082	593 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	THI22	Q06490	572 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	YFT2	Q06676	274 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	AIM6	Q07716	390 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	ICL2	Q12031	575 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	HUA2	Q12134	243 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	RRG1	Q12167	365 aa	Predicted RBP	4.23	□□□□□ -1.73
MCM16	YPR046W	SUL2	Q12325	893 aa		4.23	□□□□□ -1.73
MCM16	YPR046W	YLR302C	O13544	120 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	CKA1	P15790	372 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	SPO16	P17122	198 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	VPS33	P20795	691 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	OLE1	P21147	510 aa	Known RBP	4.22	□□□□□ -1.73
MCM16	YPR046W	SGF29	P25554	259 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	PMI40	P29952	429 aa	Known RBP	4.22	□□□□□ -1.73
MCM16	YPR046W	GCD7	P32502	381 aa	Predicted RBP	4.22	□□□□□ -1.73
MCM16	YPR046W	VMA8	P32610	256 aa	Known RBP	4.22	□□□□□ -1.73
MCM16	YPR046W	LYS9	P38999	446 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	PLB1	P39105	664 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	YJL193W	P39542	402 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	NPR2	P39923	615 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	BAP3	P41815	604 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	RMD8	P43620	662 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	MTL1	P53214	551 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	MRPS35	P53292	345 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	CSL4	P53859	292 aa	Predicted RBP	4.22	□□□□□ -1.73
MCM16	YPR046W	RCO1	Q04779	684 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	UTP21	Q06078	939 aa	Predicted RBP	4.22	□□□□□ -1.73
MCM16	YPR046W	NTO1	Q12311	748 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	SFI1	Q12369	946 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	PCD1	Q12524	340 aa		4.22	□□□□□ -1.73
MCM16	YPR046W	GCN4	P03069	281 aa		4.21	□□□□□ -1.74
MCM16	YPR046W	SEC53	P07283	254 aa	Known RBP	4.21	□□□□□ -1.74
MCM16	YPR046W	RPL19A	P0CX82	189 aa	Known RBP	4.21	□□□□□ -1.74
MCM16	YPR046W	RPL19B	P0CX83	189 aa	Predicted RBP	4.21	□□□□□ -1.74
MCM16	YPR046W	PET122	P10355	254 aa		4.21	□□□□□ -1.74
MCM16	YPR046W	CDC24	P11433	854 aa	Predicted RBP	4.21	□□□□□ -1.74
MCM16	YPR046W	LAT1	P12695	482 aa	Known RBP	4.21	□□□□□ -1.74
MCM16	YPR046W	TUP1	P16649	713 aa		4.21	□□□□□ -1.74
MCM16	YPR046W	PRP28	P23394	588 aa		4.21	□□□□□ -1.74
MCM16	YPR046W	KAR4	P25583	335 aa		4.21	□□□□□ -1.74
MCM16	YPR046W	FEN2	P25621	512 aa	Known RBP	4.21	□□□□□ -1.74
MCM16	YPR046W	CDC60	P26637	1090 aa	Known RBP	4.21	□□□□□ -1.74
MCM16	YPR046W	TOA1	P32773	286 aa		4.21	□□□□□ -1.74
MCM16	YPR046W	BCS1	P32839	456 aa		4.21	□□□□□ -1.74
MCM16	YPR046W	EHT1	P38295	451 aa		4.21	□□□□□ -1.74
MCM16	YPR046W	UTP9	P38882	575 aa	Known RBP	4.21	□□□□□ -1.74
MCM16	YPR046W	NUP60	P39705	539 aa		4.21	□□□□□ -1.74
MCM16	YPR046W	TPA1	P40032	644 aa	Known RBP	4.21	□□□□□ -1.74
MCM16	YPR046W	PIG2	P40187	538 aa		4.21	□□□□□ -1.74
MCM16	YPR046W	LRO1	P40345	661 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 82.4 ms