RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W COG1P53079 417 aa6.98□□□□□ -1.29
CIT3YPR001W SQS1P53866 767 aaKnown RBP6.98□□□□□ -1.29
CIT3YPR001W ORC4P54791 529 aa6.98□□□□□ -1.29
CIT3YPR001W SDH1Q00711 640 aa6.98□□□□□ -1.29
CIT3YPR001W NGL3Q03210 505 aa6.98□□□□□ -1.29
CIT3YPR001W TPP1Q03796 238 aa6.98□□□□□ -1.29
CIT3YPR001W RCL1Q08096 367 aaPredicted RBP6.98□□□□□ -1.29
CIT3YPR001W CLB3P24870 427 aa6.98□□□□□ -1.29
CIT3YPR001W SPB1P25582 841 aaPredicted RBP6.98□□□□□ -1.29
CIT3YPR001W RSC6P25632 483 aa6.98□□□□□ -1.29
CIT3YPR001W EFT1P32324 842 aaKnown RBP6.98□□□□□ -1.29
CIT3YPR001W IME2P32581 645 aa6.98□□□□□ -1.29
CIT3YPR001W LYS9P38999 446 aa6.98□□□□□ -1.29
CIT3YPR001W YIL108WP40483 696 aaKnown RBP6.98□□□□□ -1.29
CIT3YPR001W SKP2P42843 763 aa6.98□□□□□ -1.29
CIT3YPR001W CCT7P42943 550 aaKnown RBP6.98□□□□□ -1.29
CIT3YPR001W TAF4P50105 388 aa6.98□□□□□ -1.29
CIT3YPR001W ATG21Q02887 496 aa6.98□□□□□ -1.29
CIT3YPR001W YMR265CQ03508 461 aaKnown RBP6.98□□□□□ -1.29
CIT3YPR001W RAD30Q04049 632 aa6.98□□□□□ -1.29
CIT3YPR001W XYL2Q07993 356 aa6.98□□□□□ -1.29
CIT3YPR001W PUS7Q08647 676 aaKnown RBP6.98□□□□□ -1.29
CIT3YPR001W MDH1P17505 334 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
CIT3YPR001W IME1P21190 360 aa6.97□□□□□ -1.29
CIT3YPR001W ARG1P22768 420 aa6.97□□□□□ -1.29
CIT3YPR001W POL4P25615 582 aa6.97□□□□□ -1.29
CIT3YPR001W PET127P32606 800 aa6.97□□□□□ -1.29
CIT3YPR001W SRO77P38163 1010 aa6.97□□□□□ -1.29
CIT3YPR001W SMF1P38925 575 aa6.97□□□□□ -1.29
CIT3YPR001W VPS41P38959 992 aa6.97□□□□□ -1.29
CIT3YPR001W BUD8P41698 603 aa6.97□□□□□ -1.29
CIT3YPR001W ZIM17P42844 174 aa6.97□□□□□ -1.29
CIT3YPR001W SWA2Q06677 668 aa6.97□□□□□ -1.29
CIT3YPR001W YRF1-4O13559 1382 aa6.97□□□□□ -1.29
CIT3YPR001W TUF1P02992 437 aaKnown RBP6.96□□□□□ -1.3
CIT3YPR001W CAP1P28495 268 aaKnown RBP6.96□□□□□ -1.3
CIT3YPR001W PSD1P39006 500 aa6.96□□□□□ -1.3
CIT3YPR001W MET18P40469 1032 aa6.96□□□□□ -1.3
CIT3YPR001W GCV2P49095 1034 aa6.96□□□□□ -1.3
CIT3YPR001W MDR1P53258 950 aa6.96□□□□□ -1.3
CIT3YPR001W NAM8Q00539 523 aaKnown RBP6.96□□□□□ -1.3
CIT3YPR001W RAD33Q04231 177 aa6.96□□□□□ -1.3
CIT3YPR001W GAD1Q04792 585 aa6.96□□□□□ -1.3
CIT3YPR001W SKG3Q06315 1026 aa6.96□□□□□ -1.3
CIT3YPR001W APL5Q08951 932 aaKnown RBP6.96□□□□□ -1.3
CIT3YPR001W TY2A-LR1P0C2J4 438 aa6.95□□□□□ -1.3
CIT3YPR001W TY2A-FP0CX61 438 aa6.95□□□□□ -1.3
CIT3YPR001W TY2A-GR2P0CX62 438 aa6.95□□□□□ -1.3
CIT3YPR001W TY2A-CP25383 438 aa6.95□□□□□ -1.3
CIT3YPR001W SIF2P38262 535 aa6.95□□□□□ -1.3
CIT3YPR001W GND1P38720 489 aaKnown RBP6.95□□□□□ -1.3
CIT3YPR001W OSH7P38755 437 aa6.95□□□□□ -1.3
CIT3YPR001W YEL057CP39983 233 aa6.95□□□□□ -1.3
CIT3YPR001W SSY5P47002 699 aa6.95□□□□□ -1.3
CIT3YPR001W MTR3P48240 250 aaPredicted RBP6.95□□□□□ -1.3
CIT3YPR001W BNI5P53890 448 aaKnown RBP6.95□□□□□ -1.3
CIT3YPR001W REG1Q00816 1014 aa6.95□□□□□ -1.3
CIT3YPR001W RCR2Q03446 210 aaKnown RBP6.95□□□□□ -1.3
CIT3YPR001W TY2A-DR2Q03483 438 aa6.95□□□□□ -1.3
CIT3YPR001W SVS1Q12254 260 aa6.95□□□□□ -1.3
CIT3YPR001W TY2A-BQ12260 438 aa6.95□□□□□ -1.3
CIT3YPR001W TY2A-OR2Q12293 438 aa6.95□□□□□ -1.3
CIT3YPR001W TY2A-DR1Q12392 438 aa6.95□□□□□ -1.3
CIT3YPR001W TY2A-OR1Q12439 438 aa6.95□□□□□ -1.3
CIT3YPR001W TY2A-DR3Q99303 438 aa6.95□□□□□ -1.3
CIT3YPR001W GYP6P32806 458 aa6.94□□□□□ -1.3
CIT3YPR001W AIR1P40507 360 aaKnown RBP6.94□□□□□ -1.3
CIT3YPR001W GSM1P42950 618 aa6.94□□□□□ -1.3
CIT3YPR001W ROK1P45818 564 aaPredicted RBP6.94□□□□□ -1.3
CIT3YPR001W TAH11P47112 604 aa6.94□□□□□ -1.3
CIT3YPR001W TOF1P53840 1238 aa6.94□□□□□ -1.3
CIT3YPR001W CSL4P53859 292 aaPredicted RBP6.94□□□□□ -1.3
CIT3YPR001W PPN1Q04119 674 aa6.94□□□□□ -1.3
CIT3YPR001W SSL1Q04673 461 aaPredicted RBP6.94□□□□□ -1.3
CIT3YPR001W RNH1Q04740 348 aa6.94□□□□□ -1.3
CIT3YPR001W GPB1Q08886 897 aa6.94□□□□□ -1.3
CIT3YPR001W RIM20Q12033 661 aa6.94□□□□□ -1.3
CIT3YPR001W FRS1P15624 595 aaKnown RBP6.93□□□□□ -1.3
CIT3YPR001W NAR1P23503 491 aaKnown RBP6.93□□□□□ -1.3
CIT3YPR001W UBP11P36026 717 aa6.93□□□□□ -1.3
CIT3YPR001W GID8P40208 455 aa6.93□□□□□ -1.3
CIT3YPR001W PFK26P40433 827 aaKnown RBP6.93□□□□□ -1.3
CIT3YPR001W PXA1P41909 870 aa6.93□□□□□ -1.3
CIT3YPR001W NOP9P47077 666 aaKnown RBP6.93□□□□□ -1.3
CIT3YPR001W VPS4P52917 437 aa6.93□□□□□ -1.3
CIT3YPR001W CUL3P53202 744 aa6.93□□□□□ -1.3
CIT3YPR001W ERV25P54837 211 aaKnown RBP6.93□□□□□ -1.3
CIT3YPR001W VPS64Q03944 604 aa6.93□□□□□ -1.3
CIT3YPR001W ADY4Q05955 493 aa6.93□□□□□ -1.3
CIT3YPR001W VAM6Q07468 1049 aa6.93□□□□□ -1.3
CIT3YPR001W SPE3Q12074 293 aaKnown RBP6.93□□□□□ -1.3
CIT3YPR001W UPC2Q12151 913 aa6.93□□□□□ -1.3
CIT3YPR001W YDR461C-AQ2V2P7 80 aa6.93□□□□□ -1.3
CIT3YPR001W QCR6P00127 147 aa6.92□□□□□ -1.3
CIT3YPR001W PYC1P11154 1178 aaKnown RBP6.92□□□□□ -1.3
CIT3YPR001W HMG2P12684 1045 aa6.92□□□□□ -1.3
CIT3YPR001W STE12P13574 688 aa6.92□□□□□ -1.3
CIT3YPR001W MTC7P32633 139 aa6.92□□□□□ -1.3
CIT3YPR001W GPT2P36148 743 aa6.92□□□□□ -1.3
CIT3YPR001W UBP13P38187 747 aa6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 109 ms