RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W FRD1P32614 470 aaKnown RBP4.34□□□□□ -1.71
HSH49YOR319W RMA1P36001 430 aaKnown RBP4.34□□□□□ -1.71
HSH49YOR319W GSM1P42950 618 aa4.34□□□□□ -1.71
HSH49YOR319W CTR1P49573 406 aa4.34□□□□□ -1.71
HSH49YOR319W SAP4P53036 818 aa4.34□□□□□ -1.71
HSH49YOR319W FDC1Q03034 503 aa4.34□□□□□ -1.71
HSH49YOR319W ARA2Q04212 335 aa4.34□□□□□ -1.71
HSH49YOR319W VID22Q05934 901 aa4.34□□□□□ -1.71
HSH49YOR319W TAF3Q12297 353 aa4.34□□□□□ -1.71
HSH49YOR319W PCK1P10963 549 aa4.33□□□□□ -1.72
HSH49YOR319W RIT1P23796 513 aa4.33□□□□□ -1.72
HSH49YOR319W PHO11P35842 467 aa4.33□□□□□ -1.72
HSH49YOR319W GLG1P36143 616 aa4.33□□□□□ -1.72
HSH49YOR319W JNM1P36224 373 aa4.33□□□□□ -1.72
HSH49YOR319W PHO12P38693 467 aa4.33□□□□□ -1.72
HSH49YOR319W HRB1P38922 454 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
HSH49YOR319W FTR1P40088 404 aa4.33□□□□□ -1.72
HSH49YOR319W PSF2P40359 213 aa4.33□□□□□ -1.72
HSH49YOR319W BNA1P47096 177 aa4.33□□□□□ -1.72
HSH49YOR319W SRB7P47822 140 aa4.33□□□□□ -1.72
HSH49YOR319W YDL183CP48569 320 aa4.33□□□□□ -1.72
HSH49YOR319W CTF18P49956 741 aa4.33□□□□□ -1.72
HSH49YOR319W IMA1P53051 589 aa4.33□□□□□ -1.72
HSH49YOR319W TFC6Q06339 672 aa4.33□□□□□ -1.72
HSH49YOR319W TSR2Q06672 205 aaKnown RBP4.33□□□□□ -1.72
HSH49YOR319W ZRT2Q12436 422 aa4.33□□□□□ -1.72
HSH49YOR319W LEU2P04173 364 aaPredicted RBP4.32□□□□□ -1.72
HSH49YOR319W TUB1P09733 447 aaKnown RBP4.32□□□□□ -1.72
HSH49YOR319W ILV6P25605 309 aaKnown RBP4.32□□□□□ -1.72
HSH49YOR319W PRP45P28004 379 aaPredicted RBP4.32□□□□□ -1.72
HSH49YOR319W CDS1P38221 457 aa4.32□□□□□ -1.72
HSH49YOR319W YBR138CP38277 524 aa4.32□□□□□ -1.72
HSH49YOR319W FSH1P38777 243 aaKnown RBP4.32□□□□□ -1.72
HSH49YOR319W RIX1P38883 763 aaPredicted RBP4.32□□□□□ -1.72
HSH49YOR319W CRG1P38892 291 aaRIP-Chip data4.32□□□□□ -1.72not detected
HSH49YOR319W CCT7P42943 550 aaKnown RBP4.32□□□□□ -1.72
HSH49YOR319W FHN1P53279 174 aa4.32□□□□□ -1.72
HSH49YOR319W ATG4P53867 494 aa4.32□□□□□ -1.72
HSH49YOR319W GIR2Q03768 265 aaPredicted RBP4.32□□□□□ -1.72
HSH49YOR319W MED1Q12321 566 aa4.32□□□□□ -1.72
HSH49YOR319W BNR1P40450 1375 aa4.31□□□□□ -1.72
HSH49YOR319W INH1P01097 85 aa4.31□□□□□ -1.72
HSH49YOR319W SNF1P06782 633 aaKnown RBP4.31□□□□□ -1.72
HSH49YOR319W SEC12P11655 471 aa4.31□□□□□ -1.72
HSH49YOR319W BIK1P11709 440 aa4.31□□□□□ -1.72
HSH49YOR319W TUP1P16649 713 aa4.31□□□□□ -1.72
HSH49YOR319W RAD16P31244 790 aa4.31□□□□□ -1.72
HSH49YOR319W IFA38P38286 347 aa4.31□□□□□ -1.72
HSH49YOR319W AXL2P38928 823 aa4.31□□□□□ -1.72
HSH49YOR319W UME6P39001 836 aa4.31□□□□□ -1.72
HSH49YOR319W BDH2P39713 417 aa4.31□□□□□ -1.72
HSH49YOR319W PIG2P40187 538 aa4.31□□□□□ -1.72
HSH49YOR319W CAB2P40506 365 aa4.31□□□□□ -1.72
HSH49YOR319W APM1Q00776 475 aaPredicted RBP4.31□□□□□ -1.72
HSH49YOR319W TRS31Q03337 283 aa4.31□□□□□ -1.72
HSH49YOR319W ADE3P07245 946 aaKnown RBP4.3□□□□□ -1.72
HSH49YOR319W GUK1P15454 187 aaKnown RBP4.3□□□□□ -1.72
HSH49YOR319W BET2P20133 325 aa4.3□□□□□ -1.72
HSH49YOR319W SPO11P23179 398 aa4.3□□□□□ -1.72
HSH49YOR319W PRP28P23394 588 aa4.3□□□□□ -1.72
HSH49YOR319W SWI4P25302 1093 aaKnown RBP4.3□□□□□ -1.72
HSH49YOR319W FEN2P25621 512 aaKnown RBP4.3□□□□□ -1.72
HSH49YOR319W PAH1P32567 862 aa4.3□□□□□ -1.72
HSH49YOR319W COS111P38308 924 aa4.3□□□□□ -1.72
HSH49YOR319W YER010CP40011 234 aa4.3□□□□□ -1.72
HSH49YOR319W VFA1P40080 203 aa4.3□□□□□ -1.72
HSH49YOR319W YIL077CP40508 320 aa4.3□□□□□ -1.72
HSH49YOR319W POL31P46957 487 aa4.3□□□□□ -1.72
HSH49YOR319W ACS1Q01574 713 aa4.3□□□□□ -1.72
HSH49YOR319W VPS64Q03944 604 aa4.3□□□□□ -1.72
HSH49YOR319W YFT2Q06676 274 aa4.3□□□□□ -1.72
HSH49YOR319W MLH3Q12083 715 aa4.3□□□□□ -1.72
HSH49YOR319W RPN13O13563 156 aa4.29□□□□□ -1.72
HSH49YOR319W CDC31P06704 161 aaKnown RBP4.29□□□□□ -1.72
HSH49YOR319W PFK2P16862 959 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
HSH49YOR319W ADY2P25613 283 aa4.29□□□□□ -1.72
HSH49YOR319W CBF2P32504 956 aa4.29□□□□□ -1.72
HSH49YOR319W BCS1P32839 456 aa4.29□□□□□ -1.72
HSH49YOR319W TEF4P36008 412 aaKnown RBP4.29□□□□□ -1.72
HSH49YOR319W SET3P36124 751 aa4.29□□□□□ -1.72
HSH49YOR319W EHT1P38295 451 aa4.29□□□□□ -1.72
HSH49YOR319W NOP16P40007 231 aaKnown RBP4.29□□□□□ -1.72
HSH49YOR319W NDE1P40215 560 aa4.29□□□□□ -1.72
HSH49YOR319W ESL1P40456 1118 aa4.29□□□□□ -1.72
HSH49YOR319W BST1P43571 1029 aa4.29□□□□□ -1.72
HSH49YOR319W RRT6P53117 311 aaPredicted RBP4.29□□□□□ -1.72
HSH49YOR319W IMO32P53219 342 aa4.29□□□□□ -1.72
HSH49YOR319W ATG21Q02887 496 aa4.29□□□□□ -1.72
HSH49YOR319W RGC1Q06108 1083 aaKnown RBP4.29□□□□□ -1.72
HSH49YOR319W ARO10Q06408 635 aa4.29□□□□□ -1.72
HSH49YOR319W AFT2Q08957 416 aa4.29□□□□□ -1.72
HSH49YOR319W CHS5Q12114 671 aaKnown RBP4.29□□□□□ -1.72
HSH49YOR319W USV1Q12132 391 aa4.29□□□□□ -1.72
HSH49YOR319W CTT1P06115 562 aa4.28□□□□□ -1.72
HSH49YOR319W THR1P17423 357 aaKnown RBP4.28□□□□□ -1.72
HSH49YOR319W MDM10P18409 493 aa4.28□□□□□ -1.72
HSH49YOR319W VPS33P20795 691 aa4.28□□□□□ -1.72
HSH49YOR319W SAN1P22470 610 aa4.28□□□□□ -1.72
HSH49YOR319W RPS7AP26786 190 aaKnown RBP4.28□□□□□ -1.72
HSH49YOR319W NTH1P32356 751 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms