RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W SKY1Q03656 742 aa4.01□□□□□ -1.77
VPS17YOR132W TRE2Q08693 809 aa4.01□□□□□ -1.77
VPS17YOR132W YPR027CQ12079 277 aa4.01□□□□□ -1.77
VPS17YOR132W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77 RIP-Chip
VPS17YOR132W LAM4P38800 1345 aa4.01□□□□□ -1.77
VPS17YOR132W RTC1Q08281 1341 aa4.01□□□□□ -1.77
VPS17YOR132W TUB1P09733 447 aaKnown RBP4□□□□□ -1.77
VPS17YOR132W AEP2P22136 580 aa4□□□□□ -1.77
VPS17YOR132W ADY2P25613 283 aa4□□□□□ -1.77
VPS17YOR132W DAL3P32459 195 aa4□□□□□ -1.77
VPS17YOR132W YHR033WP38690 423 aa4□□□□□ -1.77
VPS17YOR132W CRG1P38892 291 aaRIP-Chip data4□□□□□ -1.77not detected
VPS17YOR132W TMN3P40071 706 aa4□□□□□ -1.77
VPS17YOR132W HLR1Q04429 423 aa4□□□□□ -1.77
VPS17YOR132W NYV1Q12255 253 aa4□□□□□ -1.77
VPS17YOR132W ATP4P05626 244 aa4□□□□□ -1.77
VPS17YOR132W ELF1P36053 145 aa4□□□□□ -1.77
VPS17YOR132W CUE2P36075 443 aaKnown RBP4□□□□□ -1.77
VPS17YOR132W YMC2P38087 329 aa4□□□□□ -1.77
VPS17YOR132W MUP3P38734 546 aa4□□□□□ -1.77
VPS17YOR132W FTR1P40088 404 aa4□□□□□ -1.77
VPS17YOR132W ATF1P40353 525 aa4□□□□□ -1.77
VPS17YOR132W PRM2P40534 656 aa4□□□□□ -1.77
VPS17YOR132W THI6P41835 540 aa4□□□□□ -1.77
VPS17YOR132W ESF2P53743 316 aaKnown RBP4□□□□□ -1.77
VPS17YOR132W DAK1P54838 584 aaKnown RBP4□□□□□ -1.77
VPS17YOR132W TGL2P54857 326 aa4□□□□□ -1.77
VPS17YOR132W NGL2Q03264 515 aaKnown RBP4□□□□□ -1.77
VPS17YOR132W ARO10Q06408 635 aa4□□□□□ -1.77
VPS17YOR132W DRS2P39524 1355 aa4□□□□□ -1.77
VPS17YOR132W NUP192P47054 1683 aa3.99□□□□□ -1.77
VPS17YOR132W NFU1P32860 256 aa3.99□□□□□ -1.77
VPS17YOR132W TAF5P38129 798 aa3.99□□□□□ -1.77
VPS17YOR132W CDS1P38221 457 aa3.99□□□□□ -1.77
VPS17YOR132W YBR071WP38243 211 aa3.99□□□□□ -1.77
VPS17YOR132W RIX1P38883 763 aaPredicted RBP3.99□□□□□ -1.77
VPS17YOR132W VID27P40157 782 aa3.99□□□□□ -1.77
VPS17YOR132W PMT6P42934 759 aa3.99□□□□□ -1.77
VPS17YOR132W NIT2P47016 307 aa3.99□□□□□ -1.77
VPS17YOR132W SNF12P53628 566 aa3.99□□□□□ -1.77
VPS17YOR132W PDS5Q04264 1277 aa3.99□□□□□ -1.77
VPS17YOR132W AIM41Q12032 185 aa3.99□□□□□ -1.77
VPS17YOR132W YEF3P16521 1044 aaKnown RBP3.98□□□□□ -1.77
VPS17YOR132W TUP1P16649 713 aa3.98□□□□□ -1.77
VPS17YOR132W HXT4P32467 576 aa3.98□□□□□ -1.77
VPS17YOR132W SER1P33330 395 aaKnown RBP3.98□□□□□ -1.77
VPS17YOR132W PPE1P38796 400 aa3.98□□□□□ -1.77
VPS17YOR132W MRK1P50873 501 aa3.98□□□□□ -1.77
VPS17YOR132W SPC105P53148 917 aa3.98□□□□□ -1.77
VPS17YOR132W COG6P53959 839 aa3.98□□□□□ -1.77
VPS17YOR132W NGL1Q08213 363 aaKnown RBP3.98□□□□□ -1.77
VPS17YOR132W NDJ1Q12366 352 aa3.98□□□□□ -1.77
VPS17YOR132W MDM20Q12387 796 aaKnown RBP3.98□□□□□ -1.77
VPS17YOR132W ERP4Q12450 207 aa3.98□□□□□ -1.77
VPS17YOR132W NUP188P52593 1655 aaKnown RBP3.97□□□□□ -1.77
VPS17YOR132W DOP1Q03921 1698 aa3.97□□□□□ -1.77
VPS17YOR132W IML1P47170 1584 aa3.97□□□□□ -1.77
VPS17YOR132W TUF1P02992 437 aaKnown RBP3.97□□□□□ -1.77
VPS17YOR132W ATP12P22135 325 aa3.97□□□□□ -1.77
VPS17YOR132W MTC7P32633 139 aa3.97□□□□□ -1.77
VPS17YOR132W SRP68P38687 599 aaKnown RBP3.97□□□□□ -1.77
VPS17YOR132W PAC2P39937 518 aa3.97□□□□□ -1.77
VPS17YOR132W MIT1P40002 666 aa3.97□□□□□ -1.77
VPS17YOR132W SLD3P53135 668 aa3.97□□□□□ -1.77
VPS17YOR132W YGR054WP53235 642 aaKnown RBP3.97□□□□□ -1.77
VPS17YOR132W YDR179W-AQ03983 463 aa3.97□□□□□ -1.77
VPS17YOR132W YCG1Q06680 1035 aa3.97□□□□□ -1.77
VPS17YOR132W HIF1Q12373 385 aa3.97□□□□□ -1.77
VPS17YOR132W PHO5P00635 467 aa3.97□□□□□ -1.77
VPS17YOR132W STE12P13574 688 aa3.97□□□□□ -1.77
VPS17YOR132W DHR2P36009 735 aaPredicted RBP3.97□□□□□ -1.77
VPS17YOR132W YPT53P36019 220 aa3.97□□□□□ -1.77
VPS17YOR132W YEL025CP39991 1188 aa3.97□□□□□ -1.77
VPS17YOR132W EMP65P40085 556 aa3.97□□□□□ -1.77
VPS17YOR132W PEA2P40091 420 aa3.97□□□□□ -1.77
VPS17YOR132W YNL034WP53963 612 aa3.97□□□□□ -1.77
VPS17YOR132W YNL018CP53976 612 aa3.97□□□□□ -1.77
VPS17YOR132W TIM50Q02776 476 aa3.97□□□□□ -1.77
VPS17YOR132W MPD2Q99316 277 aa3.97□□□□□ -1.77
VPS17YOR132W DNF2Q12675 1612 aa3.97□□□□□ -1.77
VPS17YOR132W CFT1Q06632 1357 aaKnown RBP3.96□□□□□ -1.78
VPS17YOR132W SST2P11972 698 aaKnown RBP3.96□□□□□ -1.78
VPS17YOR132W HMG2P12684 1045 aa3.96□□□□□ -1.78
VPS17YOR132W PGI1P12709 554 aaKnown RBP3.96□□□□□ -1.78
VPS17YOR132W COX11P19516 300 aaKnown RBP3.96□□□□□ -1.78
VPS17YOR132W SAT4P25333 603 aaKnown RBP3.96□□□□□ -1.78
VPS17YOR132W FLO10P36170 1169 aa3.96□□□□□ -1.78
VPS17YOR132W SQS1P53866 767 aaKnown RBP3.96□□□□□ -1.78
VPS17YOR132W EFR3Q03653 782 aaKnown RBP3.96□□□□□ -1.78
VPS17YOR132W SLK19Q08581 821 aaKnown RBP3.96□□□□□ -1.78
VPS17YOR132W TPK2P06245 380 aa3.95□□□□□ -1.78
VPS17YOR132W STE4P18851 423 aa3.95□□□□□ -1.78
VPS17YOR132W PEX2P32800 271 aa3.95□□□□□ -1.78
VPS17YOR132W MRPL7P36519 292 aa3.95□□□□□ -1.78
VPS17YOR132W PIH1P38768 344 aa3.95□□□□□ -1.78
VPS17YOR132W ASN1P49089 572 aaKnown RBP3.95□□□□□ -1.78
VPS17YOR132W IMO32P53219 342 aa3.95□□□□□ -1.78
VPS17YOR132W UBX4P54730 416 aa3.95□□□□□ -1.78
VPS17YOR132W MFM1Q02783 413 aa3.95□□□□□ -1.78
VPS17YOR132W LGE1Q02796 332 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms