RNA–Protein interactions for RNA: YOL145C

CTR9, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene CTR9, Length 3,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR9YOL145C YNR061CP53747 219 aa1.96□□□□□ -2.1
CTR9YOL145C MDG1P53885 366 aa1.96□□□□□ -2.1
CTR9YOL145C IZH3Q07959 543 aa1.96□□□□□ -2.1
CTR9YOL145C ZRT2Q12436 422 aa1.96□□□□□ -2.1
CTR9YOL145C BIK1P11709 440 aa1.95□□□□□ -2.1
CTR9YOL145C CAF20P12962 161 aaKnown RBP1.95□□□□□ -2.1
CTR9YOL145C THR1P17423 357 aaKnown RBP1.95□□□□□ -2.1
CTR9YOL145C RNQ1P25367 405 aa1.95□□□□□ -2.1
CTR9YOL145C HIS7P33734 552 aaKnown RBP1.95□□□□□ -2.1
CTR9YOL145C ESL2P36168 1195 aa1.95□□□□□ -2.1
CTR9YOL145C YJL193WP39542 402 aa1.95□□□□□ -2.1
CTR9YOL145C NOP16P40007 231 aaKnown RBP1.95□□□□□ -2.1
CTR9YOL145C KAP123P40069 1113 aaKnown RBP1.95□□□□□ -2.1
CTR9YOL145C ECL1P48235 211 aa1.95□□□□□ -2.1
CTR9YOL145C FHN1P53279 174 aa1.95□□□□□ -2.1
CTR9YOL145C VPS64Q03944 604 aa1.95□□□□□ -2.1
CTR9YOL145C ENB1Q08299 606 aa1.95□□□□□ -2.1
CTR9YOL145C FRE5Q08908 694 aa1.95□□□□□ -2.1
CTR9YOL145C PRP45P28004 379 aaPredicted RBP1.95□□□□□ -2.1
CTR9YOL145C GEX2P36173 615 aa1.95□□□□□ -2.1
CTR9YOL145C FSH1P38777 243 aaKnown RBP1.95□□□□□ -2.1
CTR9YOL145C ZAP1P47043 880 aa1.95□□□□□ -2.1
CTR9YOL145C COG1P53079 417 aa1.95□□□□□ -2.1
CTR9YOL145C RIM8P53179 542 aa1.95□□□□□ -2.1
CTR9YOL145C SNF12P53628 566 aa1.95□□□□□ -2.1
CTR9YOL145C DLT1Q04216 342 aa1.95□□□□□ -2.1
CTR9YOL145C VAM6Q07468 1049 aa1.95□□□□□ -2.1
CTR9YOL145C RVB2Q12464 471 aaKnown RBP1.95□□□□□ -2.1
CTR9YOL145C PNO1Q99216 274 aaKnown RBP1.95□□□□□ -2.1
CTR9YOL145C SIR3P06701 978 aa1.95□□□□□ -2.1
CTR9YOL145C SUI3P09064 285 aaKnown RBP1.95□□□□□ -2.1
CTR9YOL145C TY2A-LR1P0C2J4 438 aa1.95□□□□□ -2.1
CTR9YOL145C TY2A-FP0CX61 438 aa1.95□□□□□ -2.1
CTR9YOL145C TY2A-GR2P0CX62 438 aa1.95□□□□□ -2.1
CTR9YOL145C TY2A-CP25383 438 aa1.95□□□□□ -2.1
CTR9YOL145C RAD16P31244 790 aa1.95□□□□□ -2.1
CTR9YOL145C DSS4P32601 143 aa1.95□□□□□ -2.1
CTR9YOL145C PIG2P40187 538 aa1.95□□□□□ -2.1
CTR9YOL145C ARE2P53629 642 aaKnown RBP1.95□□□□□ -2.1
CTR9YOL145C TY2A-DR2Q03483 438 aa1.95□□□□□ -2.1
CTR9YOL145C EFR3Q03653 782 aaKnown RBP1.95□□□□□ -2.1
CTR9YOL145C TDA9Q04545 1251 aa1.95□□□□□ -2.1
CTR9YOL145C CIR2Q08822 631 aa1.95□□□□□ -2.1
CTR9YOL145C USV1Q12132 391 aa1.95□□□□□ -2.1
CTR9YOL145C TY2A-BQ12260 438 aa1.95□□□□□ -2.1
CTR9YOL145C TY2A-OR2Q12293 438 aa1.95□□□□□ -2.1
CTR9YOL145C TY2A-DR1Q12392 438 aa1.95□□□□□ -2.1
CTR9YOL145C TY2A-OR1Q12439 438 aa1.95□□□□□ -2.1
CTR9YOL145C ERP4Q12450 207 aa1.95□□□□□ -2.1
CTR9YOL145C RTP1Q12751 981 aa1.95□□□□□ -2.1
CTR9YOL145C YKL033W-AQ86ZR7 236 aa1.95□□□□□ -2.1
CTR9YOL145C TY2A-DR3Q99303 438 aa1.95□□□□□ -2.1
CTR9YOL145C TPK1P06244 397 aa1.94□□□□□ -2.1
CTR9YOL145C FUM1P08417 488 aaKnown RBP1.94□□□□□ -2.1
CTR9YOL145C PRP6P19735 899 aaPredicted RBP1.94□□□□□ -2.1
CTR9YOL145C PRP28P23394 588 aa1.94□□□□□ -2.1
CTR9YOL145C FUB1P25659 250 aa1.94□□□□□ -2.1
CTR9YOL145C RPT3P33298 428 aaKnown RBP1.94□□□□□ -2.1
CTR9YOL145C TEF4P36008 412 aaKnown RBP1.94□□□□□ -2.1
CTR9YOL145C DHR2P36009 735 aaPredicted RBP1.94□□□□□ -2.1
CTR9YOL145C ARO9P38840 513 aaPredicted RBP1.94□□□□□ -2.1
CTR9YOL145C AMA1P50082 593 aa1.94□□□□□ -2.1
CTR9YOL145C SAP4P53036 818 aa1.94□□□□□ -2.1
CTR9YOL145C REG1Q00816 1014 aa1.94□□□□□ -2.1
CTR9YOL145C ATG21Q02887 496 aa1.94□□□□□ -2.1
CTR9YOL145C ENT4Q07872 247 aa1.94□□□□□ -2.1
CTR9YOL145C YLR040CQ07988 224 aa1.94□□□□□ -2.1
CTR9YOL145C MRN1Q08925 612 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
CTR9YOL145C MET3P08536 511 aa1.94□□□□□ -2.1
CTR9YOL145C PET122P10355 254 aa1.94□□□□□ -2.1
CTR9YOL145C MRP20P32387 263 aa1.94□□□□□ -2.1
CTR9YOL145C PPS1P38148 807 aa1.94□□□□□ -2.1
CTR9YOL145C NPR3P38742 1146 aa1.94□□□□□ -2.1
CTR9YOL145C UME6P39001 836 aa1.94□□□□□ -2.1
CTR9YOL145C NPR2P39923 615 aa1.94□□□□□ -2.1
CTR9YOL145C TPA1P40032 644 aaKnown RBP1.94□□□□□ -2.1
CTR9YOL145C SIP4P46954 829 aa1.94□□□□□ -2.1
CTR9YOL145C NMA2P53204 395 aa1.94□□□□□ -2.1
CTR9YOL145C YSA1Q01976 231 aa1.94□□□□□ -2.1
CTR9YOL145C CRF1Q04930 467 aa1.94□□□□□ -2.1
CTR9YOL145C ERG8P24521 451 aa1.93□□□□□ -2.1
CTR9YOL145C ERG4P25340 473 aa1.93□□□□□ -2.1
CTR9YOL145C URK1P27515 501 aa1.93□□□□□ -2.1
CTR9YOL145C CNS1P33313 385 aa1.93□□□□□ -2.1
CTR9YOL145C CTP1P38152 299 aa1.93□□□□□ -2.1
CTR9YOL145C RKM3P38222 552 aa1.93□□□□□ -2.1
CTR9YOL145C BUD16P39988 312 aa1.93□□□□□ -2.1
CTR9YOL145C YEL025CP39991 1188 aa1.93□□□□□ -2.1
CTR9YOL145C IDS2P46958 469 aa1.93□□□□□ -2.1
CTR9YOL145C MNN10P50108 393 aaKnown RBP1.93□□□□□ -2.1
CTR9YOL145C CSL4P53859 292 aaPredicted RBP1.93□□□□□ -2.1
CTR9YOL145C NGL3Q03210 505 aa1.93□□□□□ -2.1
CTR9YOL145C TSR2Q06672 205 aaKnown RBP1.93□□□□□ -2.1
CTR9YOL145C TMA16Q08687 178 aa1.93□□□□□ -2.1
CTR9YOL145C SEM1O94742 89 aa1.93□□□□□ -2.1
CTR9YOL145C TUB2P02557 457 aaKnown RBP1.93□□□□□ -2.1
CTR9YOL145C TUF1P02992 437 aaKnown RBP1.93□□□□□ -2.1
CTR9YOL145C PMA1P05030 918 aaKnown RBP1.93□□□□□ -2.1
CTR9YOL145C CTT1P06115 562 aa1.93□□□□□ -2.1
CTR9YOL145C ALG7P07286 448 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms