RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A MRH1Q12117 320 aaPredicted RBP4.27□□□□□ -1.73
YSF3YNL138W-A AEP2P22136 580 aa4.26□□□□□ -1.73
YSF3YNL138W-A HSP104P31539 908 aaKnown RBP4.26□□□□□ -1.73
YSF3YNL138W-A YHR097CP38809 366 aaKnown RBP4.26□□□□□ -1.73
YSF3YNL138W-A CCT7P42943 550 aaKnown RBP4.26□□□□□ -1.73
YSF3YNL138W-A TAF4P50105 388 aa4.26□□□□□ -1.73
YSF3YNL138W-A FOL1P53848 824 aa4.26□□□□□ -1.73
YSF3YNL138W-A ATG4P53867 494 aa4.26□□□□□ -1.73
YSF3YNL138W-A COG6P53959 839 aa4.26□□□□□ -1.73
YSF3YNL138W-A IRC10Q08118 586 aa4.26□□□□□ -1.73
YSF3YNL138W-A CLF1Q12309 687 aaPredicted RBP4.26□□□□□ -1.73
YSF3YNL138W-A NOP56Q12460 504 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
YSF3YNL138W-A KIN3P22209 435 aa4.25□□□□□ -1.73
YSF3YNL138W-A PRP22P24384 1145 aaKnown RBP4.25□□□□□ -1.73
YSF3YNL138W-A PRE4P30657 266 aa4.25□□□□□ -1.73
YSF3YNL138W-A HXT4P32467 576 aa4.25□□□□□ -1.73
YSF3YNL138W-A MSS1P32559 526 aaPredicted RBP4.25□□□□□ -1.73
YSF3YNL138W-A YHR033WP38690 423 aa4.25□□□□□ -1.73
YSF3YNL138W-A YJL206CP39529 758 aa4.25□□□□□ -1.73
YSF3YNL138W-A KHA1P40309 873 aa4.25□□□□□ -1.73
YSF3YNL138W-A ARG2P40360 574 aa4.25□□□□□ -1.73
YSF3YNL138W-A RNR4P49723 345 aaKnown RBP4.25□□□□□ -1.73
YSF3YNL138W-A YGR151CP53287 111 aa4.25□□□□□ -1.73
YSF3YNL138W-A NGL1Q08213 363 aaKnown RBP4.25□□□□□ -1.73
YSF3YNL138W-A HCA4P20448 770 aaKnown RBP4.24□□□□□ -1.73
YSF3YNL138W-A FUB1P25659 250 aa4.24□□□□□ -1.73
YSF3YNL138W-A DGR2P32330 852 aa4.24□□□□□ -1.73
YSF3YNL138W-A MF(ALPHA)2P32435 120 aa4.24□□□□□ -1.73
YSF3YNL138W-A TFC4P33339 1025 aa4.24□□□□□ -1.73
YSF3YNL138W-A GLG1P36143 616 aa4.24□□□□□ -1.73
YSF3YNL138W-A CRG1P38892 291 aaRIP-Chip data4.24□□□□□ -1.73not detected
YSF3YNL138W-A STU2P46675 888 aa4.24□□□□□ -1.73
YSF3YNL138W-A CTR1P49573 406 aa4.24□□□□□ -1.73
YSF3YNL138W-A UBP16Q02863 499 aa4.24□□□□□ -1.73
YSF3YNL138W-A PPN1Q04119 674 aa4.24□□□□□ -1.73
YSF3YNL138W-A YDL086WQ07505 273 aa4.24□□□□□ -1.73
YSF3YNL138W-A TUP1P16649 713 aa4.23□□□□□ -1.73
YSF3YNL138W-A HEM12P32347 362 aaPredicted RBP4.23□□□□□ -1.73
YSF3YNL138W-A PLC1P32383 869 aa4.23□□□□□ -1.73
YSF3YNL138W-A CTP1P38152 299 aa4.23□□□□□ -1.73
YSF3YNL138W-A CDS1P38221 457 aa4.23□□□□□ -1.73
YSF3YNL138W-A KSP1P38691 1029 aaKnown RBP4.23□□□□□ -1.73
YSF3YNL138W-A YHR131CP38835 850 aa4.23□□□□□ -1.73
YSF3YNL138W-A TMN3P40071 706 aa4.23□□□□□ -1.73
YSF3YNL138W-A SPC105P53148 917 aa4.23□□□□□ -1.73
YSF3YNL138W-A NMA2P53204 395 aa4.23□□□□□ -1.73
YSF3YNL138W-A SPO1P53541 631 aa4.23□□□□□ -1.73
YSF3YNL138W-A NSE5Q03718 556 aa4.23□□□□□ -1.73
YSF3YNL138W-A ECM38Q05902 660 aaPredicted RBP4.23□□□□□ -1.73
YSF3YNL138W-A SUT2Q12286 268 aa4.23□□□□□ -1.73
YSF3YNL138W-A CUP1-1P0CX80 61 aa4.22□□□□□ -1.73
YSF3YNL138W-A CUP1-2P0CX81 61 aa4.22□□□□□ -1.73
YSF3YNL138W-A ABF1P14164 731 aa4.22□□□□□ -1.73
YSF3YNL138W-A CDC43P18898 376 aa4.22□□□□□ -1.73
YSF3YNL138W-A ACO1P19414 778 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
YSF3YNL138W-A COX11P19516 300 aaKnown RBP4.22□□□□□ -1.73
YSF3YNL138W-A MRC1P25588 1096 aa4.22□□□□□ -1.73
YSF3YNL138W-A FRD1P32614 470 aaKnown RBP4.22□□□□□ -1.73
YSF3YNL138W-A MTC7P32633 139 aa4.22□□□□□ -1.73
YSF3YNL138W-A TDP1P38319 544 aa4.22□□□□□ -1.73
YSF3YNL138W-A FTR1P40088 404 aa4.22□□□□□ -1.73
YSF3YNL138W-A PSF2P40359 213 aa4.22□□□□□ -1.73
YSF3YNL138W-A PRM2P40534 656 aa4.22□□□□□ -1.73
YSF3YNL138W-A QRI1P43123 477 aaKnown RBP4.22□□□□□ -1.73
YSF3YNL138W-A PEX14P53112 341 aa4.22□□□□□ -1.73
YSF3YNL138W-A YGL082WP53155 381 aa4.22□□□□□ -1.73
YSF3YNL138W-A IZH3Q07959 543 aa4.22□□□□□ -1.73
YSF3YNL138W-A MSL5Q12186 476 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
YSF3YNL138W-A TAF3Q12297 353 aa4.22□□□□□ -1.73
YSF3YNL138W-A AHC1Q12433 566 aa4.22□□□□□ -1.73
YSF3YNL138W-A FLO1P32768 1537 aa4.21□□□□□ -1.73
YSF3YNL138W-A CBP1P07252 654 aa4.21□□□□□ -1.74
YSF3YNL138W-A NTH1P32356 751 aa4.21□□□□□ -1.74
YSF3YNL138W-A BDH2P39713 417 aa4.21□□□□□ -1.74
YSF3YNL138W-A VPS73P53142 486 aaKnown RBP4.21□□□□□ -1.74
YSF3YNL138W-A YSH1Q06224 779 aaPredicted RBP4.21□□□□□ -1.74
YSF3YNL138W-A DIB1Q06819 143 aaPredicted RBP4.21□□□□□ -1.74
YSF3YNL138W-A AUS1Q08409 1394 aa4.21□□□□□ -1.74
YSF3YNL138W-A FLO11P08640 1367 aa4.2□□□□□ -1.74
YSF3YNL138W-A RMA1P36001 430 aaKnown RBP4.2□□□□□ -1.74
YSF3YNL138W-A ELF1P36053 145 aa4.2□□□□□ -1.74
YSF3YNL138W-A EHT1P38295 451 aa4.2□□□□□ -1.74
YSF3YNL138W-A EAF5P39995 279 aa4.2□□□□□ -1.74
YSF3YNL138W-A YFR016CP43597 1233 aaKnown RBP4.2□□□□□ -1.74
YSF3YNL138W-A TAH11P47112 604 aa4.2□□□□□ -1.74
YSF3YNL138W-A ENP2P48234 707 aaKnown RBP4.2□□□□□ -1.74
YSF3YNL138W-A SLD3P53135 668 aa4.2□□□□□ -1.74
YSF3YNL138W-A DIP5P53388 608 aa4.2□□□□□ -1.74
YSF3YNL138W-A RMT2Q03305 412 aa4.2□□□□□ -1.74
YSF3YNL138W-A CWC2Q12046 339 aaPredicted RBP4.2□□□□□ -1.74
YSF3YNL138W-A RKI1Q12189 258 aa4.2□□□□□ -1.74
YSF3YNL138W-A SEC3P33332 1336 aaKnown RBP4.2□□□□□ -1.74
YSF3YNL138W-A LAM4P38800 1345 aa4.2□□□□□ -1.74
YSF3YNL138W-A YEL076C-AP0CX16 216 aa4.19□□□□□ -1.74
YSF3YNL138W-A YLR464WP0CX17 216 aa4.19□□□□□ -1.74
YSF3YNL138W-A KAR1P11927 433 aa4.19□□□□□ -1.74
YSF3YNL138W-A DMC1P25453 334 aa4.19□□□□□ -1.74
YSF3YNL138W-A EMP70P32802 667 aa4.19□□□□□ -1.74
YSF3YNL138W-A GMH1P36125 273 aa4.19□□□□□ -1.74
YSF3YNL138W-A YEL076CP39971 216 aa4.19□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms