RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	NAN1	Q02931	896 aa	Known RBP	4.9	□□□□□ -1.62
ATM1	YMR301C	BSC2	Q05611	235 aa		4.9	□□□□□ -1.62
ATM1	YMR301C	NDD1	Q08887	554 aa		4.9	□□□□□ -1.62
ATM1	YMR301C	MCD1	Q12158	566 aa		4.9	□□□□□ -1.62
ATM1	YMR301C	SVS1	Q12254	260 aa		4.9	□□□□□ -1.62
ATM1	YMR301C	CSE1	P33307	960 aa		4.9	□□□□□ -1.63
ATM1	YMR301C	HSL7	P38274	827 aa		4.9	□□□□□ -1.63
ATM1	YMR301C	YHL008C	P38750	627 aa		4.9	□□□□□ -1.63
ATM1	YMR301C	DUN1	P39009	513 aa		4.9	□□□□□ -1.63
ATM1	YMR301C	PCF11	P39081	626 aa	Predicted RBP	4.9	□□□□□ -1.63
ATM1	YMR301C	OSW5	P40219	148 aa		4.9	□□□□□ -1.63
ATM1	YMR301C	SDS3	P40505	327 aa		4.9	□□□□□ -1.63
ATM1	YMR301C	TAD1	P53065	400 aa		4.9	□□□□□ -1.63
ATM1	YMR301C	KRE33	P53914	1056 aa	Known RBP	4.9	□□□□□ -1.63
ATM1	YMR301C	AIM32	Q04689	311 aa		4.9	□□□□□ -1.63
ATM1	YMR301C	HEL2	Q05580	639 aa	Known RBP	4.9	□□□□□ -1.63
ATM1	YMR301C	PMT7	Q06644	662 aa		4.9	□□□□□ -1.63
ATM1	YMR301C	SPO21	Q12411	609 aa		4.9	□□□□□ -1.63
ATM1	YMR301C	RPS3	P05750	240 aa	Known RBP	4.89	□□□□□ -1.63
ATM1	YMR301C	DAT1	P13483	248 aa	Known RBP	4.89	□□□□□ -1.63
ATM1	YMR301C	TUP1	P16649	713 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	KAR3	P17119	729 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	ARF2	P19146	181 aa	Known RBP	4.89	□□□□□ -1.63
ATM1	YMR301C	MRPL33	P20084	86 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	VMA4	P22203	233 aa	Known RBP	4.89	□□□□□ -1.63
ATM1	YMR301C	KIP2	P28743	706 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	MET22	P32179	357 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	STE13	P33894	931 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	SRB2	P34162	210 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	SAP190	P36123	1033 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	SHM1	P37292	490 aa	Predicted RBP	4.89	□□□□□ -1.63
ATM1	YMR301C	EXO5	P38289	585 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	URA8	P38627	578 aa	Predicted RBP	4.89	□□□□□ -1.63
ATM1	YMR301C	YER189W	P40104	122 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	YJR079W	P47126	109 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	NPY1	P53164	384 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	TDA7	P53882	636 aa	Predicted RBP	4.89	□□□□□ -1.63
ATM1	YMR301C	YMR206W	Q03695	313 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	HPF1	Q05164	967 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	YOR059C	Q08448	450 aa	Known RBP	4.89	□□□□□ -1.63
ATM1	YMR301C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
ATM1	YMR301C	TOR1	P35169	2470 aa		4.89	□□□□□ -1.63
ATM1	YMR301C	YIH1	P25637	258 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	SEC65	P29478	273 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	SCD5	P34758	872 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	PIK1	P39104	1066 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	TIM54	P47045	478 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	FLC3	P53121	802 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	SSL2	Q00578	843 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	INA17	Q02888	182 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	YCS4	Q06156	1176 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	TDA5	Q06417	326 aa	Known RBP	4.88	□□□□□ -1.63
ATM1	YMR301C	YPR078C	Q06813	372 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	RSB1	Q08417	382 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	YLR125W	Q12138	136 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	BI2	P03873	423 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	BI4	P03879	638 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	RAD3	P06839	778 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	RPN12	P32496	274 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	RTG1	P32607	177 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	RML2	P32611	393 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	HXT8	P40886	569 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	RTT101	P47050	842 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
ATM1	YMR301C	PRP24	P49960	444 aa	Known RBP	4.88	□□□□□ -1.63
ATM1	YMR301C	PYK2	P52489	506 aa	Known RBP	4.88	□□□□□ -1.63
ATM1	YMR301C	MTO1	P53070	669 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	HOP2	P53187	214 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	KTR6	P54070	446 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	ELP4	Q02884	456 aa	Known RBP	4.88	□□□□□ -1.63
ATM1	YMR301C	YDL129W	Q07555	291 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	THI20	Q08224	551 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	HMI1	Q12039	706 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	BI3	Q9ZZW7	517 aa		4.88	□□□□□ -1.63
ATM1	YMR301C	ACC1	Q00955	2233 aa	Known RBP	4.88	□□□□□ -1.63
ATM1	YMR301C	PRE9	P23638	258 aa	Known RBP	4.87	□□□□□ -1.63
ATM1	YMR301C	MSH3	P25336	1018 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	SEC6	P32844	805 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	WSC4	P38739	605 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	MMM1	P41800	426 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	BST1	P43571	1029 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	YJR142W	P47173	342 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	RSC4	Q02206	625 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	ELP3	Q02908	557 aa	Known RBP	4.87	□□□□□ -1.63
ATM1	YMR301C	ISU1	Q03020	165 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	GYL1	Q04322	720 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	PEX15	Q08215	383 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	IOC2	Q12072	812 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	MCM1	P11746	286 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	SEC63	P14906	663 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	MET16	P18408	261 aa	Predicted RBP	4.87	□□□□□ -1.63
ATM1	YMR301C	UTH1	P36135	365 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	PXL1	P36166	706 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	YPT35	P38815	214 aa	Known RBP	4.87	□□□□□ -1.63
ATM1	YMR301C	BAT1	P38891	393 aa	Known RBP	4.87	□□□□□ -1.63
ATM1	YMR301C	EXO1	P39875	702 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	CNN1	P43618	361 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	ARH1	P48360	493 aa		4.87	□□□□□ -1.63
ATM1	YMR301C	TAN1	P53072	289 aa	Predicted RBP	4.87	□□□□□ -1.63
ATM1	YMR301C	YGR283C	P53336	341 aa	Predicted RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms